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Os02g0137700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0526) R2 : 0.915
β1 : -0.752 (0.191) R2dD : 0.00302 R2D : -0.0016
β2 : 4.93 (0.238) R2dC : 0.268 R2C : 0.668
β3 : -4.9 (0.257) R2dE : 0.225 R2E : 0.63
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.1 (0.111) R2dN8 : 0.0244 R2N8 : 0.0117
σ : 0.976
deviance : 439.5
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_____
C
peak time of C : 8.68
E
wheather : radiation
threshold : 13.37
memory length : 8
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 13.1
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
425.14 0.969 11.1 -0.892 4.42 -5.18 3.4 1.66 -1.12 8.61 15.36 9 12.6 --
425.84 0.961 11 -0.86 5.11 -4.77 2.26 -- -1.11 8.69 13.13 8 13.2 --
434.83 0.971 11.1 -0.747 4.49 -5.09 -- -1.3 -1.12 8.54 15.22 8 12.5 --
439.5 0.976 11 -0.752 4.93 -4.9 -- -- -1.1 8.68 13.37 8 13.1 --
536.47 1.08 11.2 -0.0857 -- -8.79 -- 0.512 -1.03 -- 47.34 34 10.9 --
743.46 1.28 10.9 -0.758 8.82 -- 2.3 -- -1.1 8.38 -- -- -- --
760.12 1.29 10.9 -0.688 8.82 -- -- -- -1.11 8.36 -- -- -- --
501.63 1.04 11.3 -0.786 -- -8.91 -- -- -1.38 -- 51.69 25 10.8 --
454.24 0.993 11 -- 5.04 -4.84 -- -- -1.02 8.69 12.92 8 13.2 --
5082.43 3.33 11.2 -0.637 -- -- -- -- -1.01 -- -- -- -- --
772.6 1.3 10.9 -- 8.81 -- -- -- -1.03 8.37 -- -- -- --
517.89 1.06 11.2 -- -- -8.9 -- -- -1.29 -- 52.05 25 10.8 --
5093.13 3.33 11.2 -- -- -- -- -- -0.943 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 433.87 radiation 20.0 10 < th dose dependent sin 18 NA
2 435.08 radiation 10.0 10 < th dose dependent sin 20 NA
11 458.87 radiation 10.0 10 > th dose independent sin 18 NA
12 459.63 radiation 10.0 10 < th dose dependent rect. 7 14
49 479.98 radiation 10.0 10 < th dose independent sin 18 NA
52 480.20 temperature 10.0 270 > th dose dependent rect. 15 18
68 487.50 radiation 10.0 90 > th dose independent rect. 11 5
71 488.69 radiation 10.0 10 > th dose independent rect. 12 19
77 490.50 radiation 10.0 10 > th dose independent rect. 12 6
94 491.88 radiation 10.0 10 < th dose independent rect. 7 14
104 493.33 radiation 1.0 30 > th dose dependent sin 16 NA
105 494.11 radiation 10.0 270 > th dose independent rect. 11 2
108 494.66 radiation 10.0 10 < th dose independent rect. 12 9
111 495.09 radiation 1.0 270 > th dose independent rect. 9 6
115 496.50 temperature 20.0 270 > th dose independent rect. 15 5
128 498.39 temperature 10.0 270 > th dose dependent rect. 15 6
137 499.41 radiation 10.0 10 < th dose independent rect. 10 11
142 500.75 temperature 20.0 270 > th dose independent rect. 14 7
146 501.21 humidity 50.0 30 > th dose independent rect. 16 5
163 503.10 humidity 80.0 90 < th dose independent rect. 11 5
164 503.23 radiation 30.0 270 < th dose independent rect. 15 4
166 503.38 radiation 10.0 10 < th dose independent rect. 7 16
187 506.36 humidity 80.0 270 < th dose independent rect. 11 2
194 507.18 temperature 10.0 270 > th dose dependent rect. 16 3
195 507.21 precipitation 0.1 270 < th dose independent rect. 19 20
196 507.21 precipitation 0.1 270 < th dose dependent rect. 19 20
200 507.68 radiation 10.0 10 < th dose independent rect. 16 5
203 507.92 wind 1.0 270 > th dose independent rect. 15 4
204 507.96 temperature 10.0 270 > th dose independent rect. 15 4
206 507.96 atmosphere 1010.0 270 < th dose independent rect. 15 4
209 507.96 temperature 10.0 270 > th dose independent rect. 19 20
216 508.60 humidity 90.0 270 < th dose independent rect. 15 4
217 508.72 precipitation 0.1 270 < th dose independent rect. 9 6
218 508.72 precipitation 0.1 270 < th dose dependent rect. 9 6
220 508.88 wind 9.0 270 < th dose independent rect. 15 4
223 509.13 humidity 80.0 10 < th dose independent rect. 12 4
233 510.92 temperature 10.0 270 > th dose dependent rect. 10 4
234 510.94 wind 9.0 270 < th dose independent rect. 19 20
239 511.25 atmosphere 995.0 270 > th dose independent rect. 15 4
240 511.45 atmosphere 1015.0 270 < th dose independent rect. 15 18
244 511.53 precipitation 0.1 270 < th dose independent rect. 15 4
245 511.53 precipitation 0.1 270 < th dose dependent rect. 15 4
250 512.17 temperature 10.0 270 > th dose independent rect. 9 6
251 512.17 atmosphere 1015.0 270 < th dose independent rect. 9 6
252 512.17 temperature 10.0 270 > th dose independent rect. 15 18
262 513.40 radiation 30.0 90 < th dose dependent rect. 15 6
273 514.05 wind 9.0 270 < th dose independent rect. 15 18
279 514.41 humidity 50.0 30 > th dose independent rect. 16 7
286 514.57 temperature 10.0 270 > th dose dependent rect. 11 2
290 514.79 radiation 40.0 270 < th dose independent rect. 15 18
292 514.93 wind 9.0 270 < th dose independent rect. 9 6
296 515.19 atmosphere 995.0 270 > th dose independent rect. 19 20
303 515.85 radiation 10.0 10 > th dose independent rect. 10 21
306 515.90 radiation 40.0 270 < th dose independent rect. 14 6
361 518.23 radiation 10.0 10 > th dose independent rect. 10 8
397 519.51 atmosphere 995.0 270 > th dose independent rect. 9 6
402 519.78 atmosphere 995.0 270 > th dose independent rect. 15 18
440 521.51 radiation 1.0 270 < th dose dependent rect. 19 10
449 521.87 radiation 1.0 270 < th dose independent rect. 19 10
459 522.04 temperature 10.0 270 > th dose independent rect. 19 10
460 522.04 temperature 30.0 270 < th dose independent rect. 19 10
461 522.04 humidity 50.0 270 > th dose independent rect. 19 10
462 522.04 atmosphere 995.0 270 > th dose independent rect. 19 10
466 522.04 temperature 10.0 270 > th dose independent rect. 5 14
467 522.04 atmosphere 1015.0 270 < th dose independent rect. 5 14
481 522.20 wind 9.0 270 < th dose independent rect. 19 10
486 522.42 atmosphere 1015.0 270 < th dose independent rect. 14 7
491 522.74 precipitation 0.1 270 < th dose independent rect. 15 18
492 522.74 precipitation 0.1 270 < th dose dependent rect. 15 18
514 523.29 wind 1.0 270 > th dose independent rect. 14 7
549 524.58 atmosphere 995.0 270 > th dose dependent rect. 15 4
558 525.09 temperature 30.0 270 < th dose dependent rect. 19 8
560 525.21 precipitation 0.1 270 < th dose independent rect. 10 4
561 525.21 precipitation 0.1 270 < th dose dependent rect. 10 4
580 525.73 atmosphere 1015.0 270 < th dose independent rect. 14 20
594 526.10 precipitation 0.1 270 < th dose independent rect. 21 17
595 526.10 precipitation 0.1 270 < th dose dependent rect. 21 17
611 526.86 wind 9.0 270 < th dose independent rect. 5 14
620 527.27 humidity 50.0 90 > th dose independent rect. 16 19
627 527.45 radiation 1.0 30 > th dose dependent rect. 12 19
630 527.71 radiation 1.0 30 > th dose dependent rect. 12 6
663 528.25 temperature 20.0 10 > th dose dependent rect. 12 4
665 528.39 temperature 10.0 270 > th dose independent rect. 11 2
666 528.39 atmosphere 995.0 270 > th dose independent rect. 11 2
667 528.39 atmosphere 1015.0 270 < th dose independent rect. 11 2
668 528.39 precipitation 0.1 270 < th dose independent rect. 11 2
669 528.39 temperature 10.0 270 > th dose independent rect. 13 22
670 528.39 precipitation 0.1 270 < th dose dependent rect. 11 2
681 528.90 temperature 10.0 270 > th dose independent rect. 10 4
682 528.90 atmosphere 995.0 270 > th dose independent rect. 10 4
683 528.90 atmosphere 1015.0 270 < th dose independent rect. 10 4
685 528.90 temperature 10.0 270 > th dose independent rect. 14 20
708 529.44 temperature 20.0 270 > th dose independent rect. 11 2
717 529.68 precipitation 0.1 270 < th dose independent rect. 19 10
718 529.68 precipitation 0.1 270 < th dose dependent rect. 19 10
733 530.59 wind 1.0 270 > th dose independent rect. 9 6
742 530.72 wind 9.0 270 < th dose independent rect. 14 20
750 530.84 wind 9.0 270 < th dose independent rect. 10 4
767 531.19 wind 9.0 270 < th dose independent rect. 11 2
773 531.47 temperature 10.0 1440 > th dose independent rect. 17 5
776 531.47 radiation 30.0 1440 < th dose independent rect. 17 5
783 531.47 temperature 10.0 1440 > th dose independent rect. 22 19
806 532.02 temperature 20.0 270 > th dose independent rect. 10 4
828 532.80 wind 9.0 270 < th dose independent rect. 13 22
830 532.83 wind 1.0 270 > th dose dependent rect. 15 4
832 532.91 humidity 50.0 270 > th dose independent rect. 19 20
842 533.43 humidity 90.0 270 < th dose independent rect. 9 6
857 533.89 temperature 30.0 90 < th dose dependent rect. 21 8
862 534.03 radiation 1.0 270 > th dose independent rect. 16 2
898 534.65 wind 1.0 30 > th dose independent rect. 16 7
906 534.95 wind 1.0 270 > th dose independent rect. 11 2
922 535.17 humidity 90.0 10 < th dose dependent rect. 12 4
946 535.40 temperature 10.0 10 > th dose dependent rect. 10 6
955 535.59 precipitation 0.1 10 < th dose independent rect. 16 5
967 535.59 precipitation 0.1 10 < th dose dependent rect. 16 5
980 535.69 temperature 25.0 10 > th dose independent rect. 12 4