Os02g0137600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Bacterial methyltransferase family protein.
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Os02g0137600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Bacterial methyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.33 | 0.595 | 8.24 | -0.965 | 1.81 | -1.03 | -0.361 | -1.04 | -1.3 | 19.9 | 70.01 | 1601 | -- | -- |
| 162.19 | 0.593 | 8.26 | -1.1 | 1.81 | -1.08 | -0.362 | -- | -1.35 | 20 | 70.34 | 1591 | -- | -- |
| 160.71 | 0.59 | 8.24 | -0.957 | 1.81 | -1.03 | -- | -1.05 | -1.31 | 19.9 | 70 | 1605 | -- | -- |
| 162.58 | 0.594 | 8.26 | -1.09 | 1.81 | -1.09 | -- | -- | -1.35 | 20 | 70.34 | 1591 | -- | -- |
| 225.65 | 0.7 | 8.24 | -1.13 | -- | -2.15 | -- | -0.511 | -1.29 | -- | 73.01 | 708 | -- | -- |
| 198.13 | 0.66 | 8.23 | -0.902 | 1.85 | -- | -0.409 | -- | -1.21 | 19.7 | -- | -- | -- | -- |
| 198.61 | 0.66 | 8.23 | -0.892 | 1.85 | -- | -- | -- | -1.21 | 19.7 | -- | -- | -- | -- |
| 223.65 | 0.697 | 8.2 | -1.1 | -- | -2.1 | -- | -- | -1.32 | -- | 74.8 | 708 | -- | -- |
| 192.73 | 0.647 | 8.23 | -- | 1.82 | -0.929 | -- | -- | -1.22 | 19.9 | 71 | 1593 | -- | -- |
| 383.99 | 0.916 | 8.18 | -0.915 | -- | -- | -- | -- | -1.24 | -- | -- | -- | -- | -- |
| 219.56 | 0.693 | 8.2 | -- | 1.86 | -- | -- | -- | -1.11 | 19.7 | -- | -- | -- | -- |
| 252.46 | 0.74 | 8.17 | -- | -- | -1.78 | -- | -- | -1.17 | -- | 82.82 | 620 | -- | -- |
| 406.09 | 0.941 | 8.16 | -- | -- | -- | -- | -- | -1.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.65 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 2 | 151.31 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 3 | 151.62 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 4 | 151.91 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 8 | 153.51 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 12 | 153.71 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 13 | 153.78 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 16 | 154.27 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 26 | 154.71 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 31 | 154.95 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 16 | 6 |
| 39 | 155.10 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 43 | 155.22 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 46 | 155.36 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 48 | 155.37 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 63 | 155.67 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 74 | 155.91 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 9 |
| 94 | 156.07 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 22 | 17 |
| 121 | 156.30 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 12 | 11 |
| 123 | 156.31 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 125 | 156.34 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 130 | 156.38 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 142 | 156.45 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 17 |
| 148 | 156.48 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 10 | 13 |
| 156 | 156.51 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 18 |
| 169 | 156.59 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 17 |
| 170 | 156.59 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 17 |
| 189 | 156.71 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 237 | 156.96 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 20 |
| 270 | 157.08 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 20 |
| 279 | 157.14 | temperature | 20.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 291 | 157.21 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 294 | 157.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 307 | 157.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 310 | 157.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 12 |
| 397 | 157.57 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 8 |
| 419 | 157.66 | temperature | 25.0 | 270 | > th | dose dependent | sin | 3 | NA |
| 430 | 157.69 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 463 | 157.78 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 494 | 157.90 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 20 | NA |
| 516 | 157.97 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 18 |
| 517 | 157.98 | temperature | 20.0 | 14400 | < th | dose independent | sin | 16 | NA |
| 539 | 158.04 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 615 | 158.24 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 22 | NA |
| 622 | 158.26 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 22 | NA |
| 623 | 158.26 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 22 | NA |
| 651 | 158.32 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 680 | 158.41 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 21 |
| 733 | 158.55 | wind | 5.0 | 14400 | > th | dose independent | rect. | 4 | 7 |
| 757 | 158.59 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 774 | 158.62 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 10 | 13 |
| 791 | 158.65 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 22 |
| 820 | 158.70 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 12 |
| 852 | 158.75 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 871 | 158.79 | humidity | 90.0 | 14400 | < th | dose independent | sin | 19 | NA |
| 945 | 158.89 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 20 | NA |
| 986 | 158.96 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 15 |