Os02g0135600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0135600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.64 | 0.247 | 11 | -0.61 | 0.361 | -0.423 | -0.127 | 0.488 | -0.365 | 5.57 | 1013 | 5584 | -- | -- |
| 28.05 | 0.247 | 10.9 | -0.624 | 0.377 | -0.523 | -0.259 | -- | -0.352 | 5.54 | 1015 | 5526 | -- | -- |
| 27.68 | 0.245 | 11 | -0.613 | 0.36 | -0.425 | -- | 0.497 | -0.366 | 5.61 | 1013 | 5588 | -- | -- |
| 27.87 | 0.246 | 10.9 | -0.585 | 0.362 | -0.594 | -- | -- | -0.356 | 5.64 | 1015 | 5506 | -- | -- |
| 34.39 | 0.273 | 11 | -0.612 | -- | -0.437 | -- | 0.514 | -0.361 | -- | 1013 | 5622 | -- | -- |
| 33.74 | 0.272 | 10.9 | -0.383 | 0.372 | -- | -0.227 | -- | -0.267 | 5.51 | -- | -- | -- | -- |
| 33.86 | 0.272 | 10.9 | -0.383 | 0.371 | -- | -- | -- | -0.266 | 5.59 | -- | -- | -- | -- |
| 34.66 | 0.274 | 10.9 | -0.585 | -- | -0.603 | -- | -- | -0.345 | -- | 1015 | 5630 | -- | -- |
| 34.42 | 0.273 | 10.9 | -- | 0.356 | -0.376 | -- | -- | -0.269 | 5.66 | 1014 | 4874 | -- | -- |
| 41.02 | 0.299 | 10.9 | -0.371 | -- | -- | -- | -- | -0.257 | -- | -- | -- | -- | -- |
| 37.73 | 0.287 | 10.9 | -- | 0.365 | -- | -- | -- | -0.223 | 5.64 | -- | -- | -- | -- |
| 40.93 | 0.298 | 10.9 | -- | -- | -0.414 | -- | -- | -0.263 | -- | 1014 | 4690 | -- | -- |
| 44.65 | 0.312 | 10.9 | -- | -- | -- | -- | -- | -0.216 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 18 | 27.64 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 21 |
| 19 | 27.65 | humidity | 60 | 14400 | < th | dose dependent | rect. | 18 | 15 |
| 20 | 27.66 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 29 | 27.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 58 | 27.78 | wind | 7 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 62 | 27.79 | humidity | 50 | 14400 | < th | dose dependent | rect. | 10 | 7 |
| 95 | 27.81 | wind | 7 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 96 | 27.81 | humidity | 50 | 14400 | < th | dose dependent | sin | 21 | NA |
| 99 | 27.81 | humidity | 50 | 14400 | < th | dose dependent | no | NA | NA |
| 224 | 27.82 | humidity | 50 | 14400 | < th | dose dependent | sin | 9 | NA |
| 225 | 27.82 | humidity | 50 | 14400 | < th | dose dependent | sin | 19 | NA |
| 255 | 27.84 | humidity | 50 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 354 | 27.93 | humidity | 50 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 371 | 27.98 | humidity | 50 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 375 | 27.98 | humidity | 50 | 14400 | < th | dose dependent | rect. | 8 | 4 |
| 457 | 28.08 | humidity | 60 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 462 | 28.08 | wind | 7 | 14400 | > th | dose dependent | rect. | 14 | 7 |
| 544 | 28.18 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 16 |
| 545 | 28.19 | radiation | 1 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 549 | 28.20 | wind | 9 | 43200 | < th | dose independent | rect. | 14 | 16 |
| 555 | 28.21 | humidity | 60 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 556 | 28.21 | radiation | 1 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 557 | 28.21 | humidity | 50 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 592 | 28.23 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 16 |
| 613 | 28.26 | wind | 5 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 681 | 28.34 | wind | 7 | 14400 | > th | dose independent | sin | 19 | NA |
| 712 | 28.37 | wind | 7 | 14400 | < th | dose independent | sin | 19 | NA |
| 732 | 28.38 | humidity | 50 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 759 | 28.39 | atmosphere | 1010 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 761 | 28.39 | atmosphere | 1010 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 796 | 28.41 | wind | 9 | 43200 | < th | dose independent | sin | 15 | NA |
| 803 | 28.41 | wind | 7 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 808 | 28.41 | temperature | 30 | 1440 | < th | dose dependent | sin | 21 | NA |
| 819 | 28.42 | wind | 7 | 14400 | > th | dose independent | rect. | 4 | 14 |
| 824 | 28.42 | temperature | 10 | 1440 | > th | dose dependent | sin | 20 | NA |
| 827 | 28.42 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 2 |
| 889 | 28.45 | wind | 9 | 43200 | > th | dose independent | sin | 15 | NA |
| 899 | 28.45 | radiation | 1 | 4320 | > th | dose independent | rect. | 8 | 9 |
| 900 | 28.45 | radiation | 1 | 4320 | < th | dose independent | rect. | 8 | 9 |
| 905 | 28.45 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 16 |
| 932 | 28.46 | wind | 7 | 14400 | < th | dose independent | rect. | 4 | 14 |
| 940 | 28.46 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 21 |
| 982 | 28.48 | radiation | 1 | 4320 | < th | dose independent | rect. | 12 | 5 |