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Os02g0134400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : L-aspartate oxidase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0314) R2 : 0.884
β1 : 1.22 (0.118) R2dD : 0.0279 R2D : 0.0192
β2 : 2.69 (0.124) R2dC : 0.298 R2C : 0.661
β3 : -2.89 (0.166) R2dE : 0.197 R2E : 0.547
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.254 (0.0689) R2dN8 : 0.00468 R2N8 : 0.0119
σ : 0.585
deviance : 157.6
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C
peak time of C : 3.8
E
wheather : temperature
threshold : 12.31
memory length : 270
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.03
open length of G : 20

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
139.15 0.554 10.5 1.07 2.55 -3.11 -2.83 -0.635 -0.28 3.65 10.29 275 4.94 20.1
138.41 0.548 10.4 1.18 2.61 -3.06 -2.53 -- -0.244 3.7 12.48 268 5.02 20
149.11 0.569 10.4 1.52 2.8 -3.08 -- 2.86 -0.122 4.08 13.66 206 5.02 20.5
157.6 0.585 10.4 1.22 2.69 -2.89 -- -- -0.254 3.8 12.31 270 5.03 20
223.18 0.696 10.4 2.01 -- -5.35 -- 5.4 -0.136 -- 11.67 253 6.45 15.9
231.98 0.714 10.5 0.674 4.47 -- -1.56 -- -0.558 4.27 -- -- -- --
238.67 0.723 10.5 0.69 4.47 -- -- -- -0.549 4.3 -- -- -- --
198.42 0.656 10.5 1.12 -- -4.95 -- -- -0.373 -- -1.068 420 5.35 14.9
189.96 0.642 10.5 -- 3.12 -2.39 -- -- -0.427 4.11 12.12 206 5.27 20.3
1312.76 1.69 10.5 0.867 -- -- -- -- -0.431 -- -- -- -- --
251.21 0.741 10.5 -- 4.48 -- -- -- -0.626 4.3 -- -- -- --
227.41 0.702 10.5 -- -- -4.86 -- -- -0.511 -- -3.516 402 5.63 14.8
1332.6 1.7 10.5 -- -- -- -- -- -0.527 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 139.66 temperature 10 270 > th dose dependent rect. 5 20
4 141.77 temperature 15 270 > th dose dependent rect. 6 18
17 146.89 temperature 15 10 > th dose dependent rect. 6 22
69 156.14 temperature 30 10 < th dose dependent rect. 1 23
95 159.02 temperature 30 90 < th dose dependent rect. 23 23
96 159.04 temperature 20 270 > th dose independent rect. 5 20
103 159.72 temperature 30 270 < th dose dependent rect. 9 21
108 160.26 temperature 30 30 < th dose dependent rect. 19 23
112 160.40 temperature 30 10 < th dose dependent rect. 13 23
120 160.86 temperature 30 10 < th dose dependent rect. 9 23
122 160.94 temperature 30 90 < th dose dependent rect. 11 22
124 161.00 temperature 30 10 < th dose dependent rect. 11 23
130 161.41 temperature 30 10 < th dose dependent rect. 15 23
133 161.46 temperature 30 90 < th dose dependent rect. 9 23
134 161.47 temperature 30 10 < th dose dependent no NA NA
151 162.12 temperature 30 90 < th dose dependent rect. 7 23
161 162.42 temperature 30 10 < th dose dependent rect. 23 23
175 162.88 temperature 15 10 > th dose dependent no NA NA
196 163.89 temperature 30 10 < th dose dependent rect. 3 23
215 164.45 temperature 30 10 < th dose dependent rect. 17 23
226 164.76 temperature 30 10 < th dose dependent rect. 7 23
230 165.19 temperature 25 270 < th dose dependent sin 21 NA
247 165.56 temperature 30 30 < th dose dependent rect. 21 23
276 166.21 temperature 25 10 < th dose dependent sin 19 NA
319 167.57 temperature 25 720 < th dose dependent rect. 6 15
321 167.69 temperature 25 720 < th dose dependent sin 23 NA
331 167.95 temperature 10 270 > th dose dependent rect. 16 23
340 168.10 temperature 25 270 < th dose dependent rect. 10 11
355 168.47 temperature 25 270 < th dose independent rect. 8 22
360 168.61 temperature 25 270 < th dose independent rect. 9 20
374 168.80 wind 1 43200 > th dose dependent rect. 1 1
425 169.76 temperature 20 10 > th dose independent rect. 6 22
509 171.08 wind 3 43200 > th dose independent rect. 1 1
530 171.29 temperature 20 10 > th dose dependent rect. 17 23
536 171.40 temperature 25 270 < th dose independent rect. 23 22
553 171.64 temperature 30 270 < th dose dependent rect. 13 16
566 171.82 temperature 20 10 > th dose dependent rect. 21 23
595 172.16 temperature 15 90 > th dose dependent rect. 20 23
604 172.34 temperature 25 10 < th dose dependent rect. 5 23
605 172.35 wind 3 43200 < th dose independent rect. 1 1
615 172.47 temperature 30 90 < th dose dependent rect. 3 20
642 172.87 wind 1 43200 > th dose dependent rect. 23 3
653 172.97 temperature 30 90 < th dose dependent rect. 3 18
663 173.09 temperature 30 90 < th dose dependent rect. 3 16
823 174.85 temperature 25 270 < th dose independent no NA NA
846 175.09 temperature 25 270 > th dose independent rect. 11 23
854 175.17 temperature 20 1440 < th dose independent rect. 2 10
858 175.20 temperature 25 270 > th dose independent no NA NA
883 175.42 temperature 20 1440 > th dose independent rect. 20 22
901 175.56 temperature 20 1440 > th dose independent rect. 2 10
914 175.75 temperature 20 1440 > th dose independent sin 4 NA
922 175.80 temperature 20 1440 > th dose independent rect. 20 16
924 175.82 temperature 20 1440 > th dose independent rect. 1 22
928 175.84 temperature 20 1440 > th dose independent rect. 8 23
936 175.87 temperature 20 1440 < th dose independent sin 4 NA
939 175.89 temperature 30 10 < th dose dependent rect. 14 17
947 175.95 temperature 20 1440 > th dose independent rect. 14 22
978 176.12 temperature 25 270 > th dose independent rect. 17 23
982 176.14 temperature 20 1440 > th dose independent rect. 17 22
997 176.20 temperature 20 1440 > th dose independent no NA NA