Os02g0134200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1645 family protein.
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Os02g0134200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1645 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 518.86 | 1.07 | 5.59 | 2.8 | 1.14 | -1.49 | -0.884 | -0.26 | -0.0145 | 7.91 | 68.89 | 5725 | -- | -- |
| 511.39 | 1.05 | 5.58 | 2.92 | 1.23 | -1.62 | -0.917 | -- | -0.0596 | 7.91 | 69 | 10735 | -- | -- |
| 512.84 | 1.05 | 5.59 | 2.87 | 1.13 | -1.46 | -- | -0.303 | -0.017 | 7.93 | 69 | 11367 | -- | -- |
| 510.8 | 1.05 | 5.59 | 2.95 | 1.23 | -1.65 | -- | -- | -0.0244 | 7.82 | 67 | 12092 | -- | -- |
| 583.93 | 1.13 | 5.61 | 3 | -- | -1.59 | -- | -0.0924 | 0.0237 | -- | 67.65 | 11554 | -- | -- |
| 554.35 | 1.1 | 5.57 | 2.72 | 1.15 | -- | -0.936 | -- | 0.0742 | 7.78 | -- | -- | -- | -- |
| 556.86 | 1.11 | 5.57 | 2.69 | 1.15 | -- | -- | -- | 0.0749 | 7.72 | -- | -- | -- | -- |
| 583.21 | 1.12 | 5.61 | 3.01 | -- | -1.73 | -- | -- | 0.0142 | -- | 66.06 | 12922 | -- | -- |
| 705.59 | 1.24 | 5.66 | -- | 1.21 | -1.41 | -- | -- | -0.345 | 7.67 | 92.11 | 12998 | -- | -- |
| 628.83 | 1.17 | 5.6 | 2.71 | -- | -- | -- | -- | 0.0916 | -- | -- | -- | -- | -- |
| 747.79 | 1.28 | 5.64 | -- | 1.18 | -- | -- | -- | -0.225 | 7.56 | -- | -- | -- | -- |
| 676.73 | 1.21 | 5.76 | -- | -- | -2 | -- | -- | -0.623 | -- | 95.85 | 47520 | -- | -- |
| 822.03 | 1.34 | 5.66 | -- | -- | -- | -- | -- | -0.209 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 502.82 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 6 | 503.86 | humidity | 90 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 15 | 504.95 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 43 | 506.48 | humidity | 50 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 45 | 506.54 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 58 | 506.85 | humidity | 90 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 89 | 507.50 | humidity | 50 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 184 | 508.27 | wind | 1 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 186 | 508.28 | wind | 3 | 14400 | < th | dose independent | rect. | 3 | 2 |
| 194 | 508.35 | wind | 3 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 233 | 508.61 | wind | 1 | 14400 | > th | dose dependent | rect. | 3 | 2 |
| 260 | 508.80 | wind | 1 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 269 | 508.83 | humidity | 90 | 14400 | < th | dose dependent | sin | 0 | NA |
| 277 | 508.85 | humidity | 50 | 14400 | > th | dose dependent | sin | 0 | NA |
| 415 | 509.48 | wind | 3 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 424 | 509.51 | wind | 7 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 433 | 509.53 | wind | 3 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 462 | 509.68 | humidity | 60 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 508 | 509.88 | humidity | 60 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 543 | 510.04 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 628 | 510.36 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 645 | 510.41 | humidity | 90 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 658 | 510.45 | wind | 3 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 665 | 510.46 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 688 | 510.55 | humidity | 70 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 727 | 510.71 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 783 | 510.90 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 10 |
| 787 | 510.92 | humidity | 90 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 788 | 510.92 | humidity | 50 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 789 | 510.94 | humidity | 80 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 885 | 511.25 | wind | 3 | 14400 | < th | dose dependent | sin | 7 | NA |
| 901 | 511.28 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 989 | 511.54 | humidity | 90 | 14400 | < th | dose dependent | rect. | 16 | 1 |