Os02g0131300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0131300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.51 | 0.218 | 13.2 | -1.03 | 0.463 | -0.821 | 0.194 | 0.371 | -0.159 | 3.14 | 30.79 | 1855 | -- | -- |
| 21.61 | 0.216 | 13.2 | -0.948 | 0.461 | -0.826 | 0.207 | -- | -0.151 | 3.14 | 29.67 | 1857 | -- | -- |
| 21.63 | 0.217 | 13.2 | -1.03 | 0.464 | -0.821 | -- | 0.358 | -0.162 | 3.13 | 30.6 | 1851 | -- | -- |
| 21.73 | 0.217 | 13.2 | -0.949 | 0.464 | -0.822 | -- | -- | -0.15 | 3.14 | 29.7 | 1856 | -- | -- |
| 30 | 0.255 | 13.2 | -1.06 | -- | -0.85 | -- | 0.286 | -0.145 | -- | 51.74 | 2560 | -- | -- |
| 33.09 | 0.27 | 13.2 | -0.664 | 0.448 | -- | 0.193 | -- | 0.0401 | 2.7 | -- | -- | -- | -- |
| 33.22 | 0.27 | 13.2 | -0.668 | 0.448 | -- | -- | -- | 0.0389 | 2.7 | -- | -- | -- | -- |
| 30.02 | 0.255 | 13.2 | -0.991 | -- | -0.85 | -- | -- | -0.148 | -- | 30.7 | 2569 | -- | -- |
| 41.47 | 0.3 | 13.2 | -- | 0.382 | -0.443 | -- | -- | 0.0512 | 3 | 37.87 | 1129 | -- | -- |
| 44.93 | 0.313 | 13.2 | -0.649 | -- | -- | -- | -- | 0.0503 | -- | -- | -- | -- | -- |
| 44.99 | 0.314 | 13.2 | -- | 0.435 | -- | -- | -- | 0.113 | 2.68 | -- | -- | -- | -- |
| 49.45 | 0.328 | 13.2 | -- | -- | -0.587 | -- | -- | 0.0393 | -- | 61.71 | 1106 | -- | -- |
| 56.05 | 0.349 | 13.1 | -- | -- | -- | -- | -- | 0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 21.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 14 |
| 6 | 21.02 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 14 |
| 7 | 21.03 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 15 | 21.05 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 50 | 21.10 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 69 | 21.12 | temperature | 15 | 1440 | > th | dose dependent | sin | 13 | NA |
| 73 | 21.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 85 | 21.12 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 20 |
| 382 | 21.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 19 |
| 412 | 21.44 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 413 | 21.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 3 |
| 943 | 21.77 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |