Os02g0130000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to SWIb domain-containing protein (Fragment).
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Os02g0130000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to SWIb domain-containing protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.6 | 0.372 | 9.28 | 1.62 | 1.92 | 0.754 | 0.727 | -2.13 | 0.186 | 17.8 | 25.11 | 88 | -- | -- |
| 64.12 | 0.373 | 9.25 | 1.86 | 1.95 | 0.593 | 0.478 | -- | 0.263 | 17.8 | 25.38 | 64 | -- | -- |
| 63.75 | 0.372 | 9.27 | 1.67 | 1.92 | 0.762 | -- | -1.65 | 0.213 | 17.8 | 25.4 | 75 | -- | -- |
| 64.64 | 0.374 | 9.25 | 1.86 | 1.96 | 0.611 | -- | -- | 0.261 | 17.8 | 25.4 | 55 | -- | -- |
| 178.93 | 0.623 | 9.29 | 1.3 | -- | 2.27 | -- | -2.04 | -0.00717 | -- | 24.5 | 294 | -- | -- |
| 69.49 | 0.391 | 9.25 | 1.96 | 2.14 | -- | 0.693 | -- | 0.297 | 17.6 | -- | -- | -- | -- |
| 70.68 | 0.394 | 9.24 | 1.96 | 2.14 | -- | -- | -- | 0.3 | 17.6 | -- | -- | -- | -- |
| 185.29 | 0.634 | 9.25 | 1.56 | -- | 2.09 | -- | -- | 0.0664 | -- | 24.5 | 290 | -- | -- |
| 151.33 | 0.573 | 9.3 | -- | 1.74 | 1.07 | -- | -- | -0.0233 | 18.1 | 23.43 | 83 | -- | -- |
| 309.57 | 0.822 | 9.21 | 1.89 | -- | -- | -- | -- | 0.248 | -- | -- | -- | -- | -- |
| 171.66 | 0.613 | 9.29 | -- | 2.11 | -- | -- | -- | 0.0823 | 17.6 | -- | -- | -- | -- |
| 247.35 | 0.732 | 9.3 | -- | -- | 2.3 | -- | -- | -0.138 | -- | 24.3 | 284 | -- | -- |
| 403.55 | 0.938 | 9.26 | -- | -- | -- | -- | -- | 0.039 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.81 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 3 | 57.55 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 9 |
| 12 | 58.25 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 23 | 7 |
| 15 | 58.27 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 17 |
| 24 | 58.60 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 2 |
| 50 | 59.27 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 55 | 59.31 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 66 | 59.49 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 22 | 4 |
| 69 | 59.51 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 74 | 59.57 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 89 | 59.79 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 22 | 4 |
| 97 | 59.90 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 120 | 60.08 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 17 |
| 133 | 60.19 | temperature | 25.0 | 90 | > th | dose independent | rect. | 8 | 10 |
| 162 | 60.44 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 15 |
| 183 | 60.57 | temperature | 25.0 | 90 | < th | dose independent | rect. | 5 | 17 |
| 194 | 60.68 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 200 | 60.71 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 205 | 60.75 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 2 | 19 |
| 206 | 60.76 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 207 | 60.77 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 3 | 17 |
| 218 | 60.81 | radiation | 1.0 | 270 | < th | dose dependent | sin | 0 | NA |
| 232 | 60.89 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 19 |
| 236 | 60.92 | radiation | 1.0 | 270 | > th | dose independent | sin | 0 | NA |
| 241 | 60.93 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 246 | 60.94 | radiation | 1.0 | 270 | < th | dose independent | sin | 0 | NA |
| 247 | 60.94 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 17 |
| 260 | 61.00 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 23 | 2 |
| 267 | 61.02 | temperature | 25.0 | 10 | < th | dose independent | rect. | 23 | 7 |
| 285 | 61.07 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 328 | 61.23 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 20 |
| 329 | 61.23 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 341 | 61.24 | temperature | 25.0 | 90 | > th | dose dependent | sin | 0 | NA |
| 344 | 61.25 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 23 | 7 |
| 346 | 61.25 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 356 | 61.30 | temperature | 25.0 | 10 | > th | dose independent | rect. | 9 | 9 |
| 369 | 61.35 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 18 | 14 |
| 393 | 61.42 | temperature | 30.0 | 90 | < th | dose dependent | sin | 23 | NA |
| 399 | 61.44 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 10 |
| 414 | 61.47 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 415 | 61.48 | wind | 1.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 420 | 61.49 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 23 | 7 |
| 430 | 61.52 | wind | 7.0 | 270 | < th | dose independent | rect. | 9 | 17 |
| 436 | 61.53 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 17 |
| 443 | 61.55 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 20 |
| 449 | 61.57 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 458 | 61.58 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 478 | 61.63 | temperature | 25.0 | 10 | < th | dose independent | rect. | 7 | 15 |
| 504 | 61.67 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 22 |
| 515 | 61.69 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 518 | 61.69 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 8 | 17 |
| 548 | 61.75 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 555 | 61.75 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 559 | 61.77 | temperature | 25.0 | 270 | > th | dose dependent | sin | 4 | NA |
| 592 | 61.80 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 20 |
| 619 | 61.84 | wind | 1.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 629 | 61.86 | wind | 1.0 | 43200 | < th | dose independent | rect. | 14 | 14 |
| 636 | 61.87 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 4 |
| 638 | 61.87 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 16 |
| 649 | 61.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 651 | 61.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 654 | 61.88 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 661 | 61.89 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 667 | 61.90 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 676 | 61.91 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 4 |
| 677 | 61.91 | humidity | 70.0 | 270 | > th | dose independent | rect. | 2 | 9 |
| 682 | 61.91 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 11 |
| 684 | 61.91 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 24 | 15 |
| 687 | 61.92 | temperature | 25.0 | 90 | < th | dose independent | rect. | 23 | 5 |
| 688 | 61.92 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 12 |
| 689 | 61.92 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 7 | 3 |
| 708 | 61.95 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 711 | 61.96 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 8 |
| 720 | 61.96 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 18 | 14 |
| 722 | 61.96 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 725 | 61.97 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 5 | 3 |
| 746 | 61.98 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 760 | 62.00 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 805 | 62.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 6 |
| 806 | 62.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 810 | 62.06 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 816 | 62.07 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 824 | 62.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 825 | 62.08 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 827 | 62.08 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 831 | 62.08 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 836 | 62.08 | wind | 1.0 | 43200 | > th | dose independent | rect. | 14 | 14 |
| 838 | 62.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 18 |
| 841 | 62.08 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 879 | 62.12 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 4 |
| 888 | 62.13 | humidity | 90.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 907 | 62.15 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 19 | 13 |
| 959 | 62.20 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 12 |