Os02g0128100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0128100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.75 | 0.409 | 8.48 | 1.04 | 0.527 | 0.735 | -0.107 | -0.633 | -0.0791 | 9.15 | 24.6 | 1496 | -- | -- |
| 75.97 | 0.406 | 8.49 | 0.936 | 0.519 | 0.841 | -0.0921 | -- | -0.118 | 9.11 | 23.47 | 1498 | -- | -- |
| 75.78 | 0.405 | 8.48 | 1.03 | 0.527 | 0.741 | -- | -0.602 | -0.0825 | 9.18 | 24.4 | 1504 | -- | -- |
| 76 | 0.406 | 8.49 | 0.936 | 0.529 | 0.871 | -- | -- | -0.114 | 9.17 | 23.32 | 1494 | -- | -- |
| 84.57 | 0.428 | 8.47 | 1.2 | -- | 0.915 | -- | -1.4 | -0.00726 | -- | 29.9 | 713 | -- | -- |
| 84.45 | 0.431 | 8.53 | 0.687 | 0.523 | -- | -0.056 | -- | -0.264 | 9.29 | -- | -- | -- | -- |
| 84.46 | 0.43 | 8.53 | 0.685 | 0.523 | -- | -- | -- | -0.264 | 9.29 | -- | -- | -- | -- |
| 86.42 | 0.433 | 8.5 | 0.935 | -- | 0.914 | -- | -- | -0.0759 | -- | 29.28 | 742 | -- | -- |
| 95.01 | 0.456 | 8.53 | -- | 0.557 | 0.361 | -- | -- | -0.299 | 9.5 | 23.32 | 1494 | -- | -- |
| 100.38 | 0.468 | 8.54 | 0.683 | -- | -- | -- | -- | -0.262 | -- | -- | -- | -- | -- |
| 96.83 | 0.46 | 8.54 | -- | 0.523 | -- | -- | -- | -0.34 | 9.2 | -- | -- | -- | -- |
| 106.97 | 0.482 | 8.54 | -- | -- | 0.553 | -- | -- | -0.244 | -- | 29.7 | 666 | -- | -- |
| 112.68 | 0.495 | 8.56 | -- | -- | -- | -- | -- | -0.338 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.12 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 9 | 73.02 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 18 | 20 |
| 13 | 73.18 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 15 | 73.20 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 16 | 73.22 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 20 | 21 |
| 17 | 73.22 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 11 | 22 |
| 22 | 73.24 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 4 | 13 |
| 102 | 73.46 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 4 | 18 |
| 113 | 73.46 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 1 | 23 |
| 116 | 73.47 | humidity | 60.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 118 | 73.47 | humidity | 60.0 | 43200 | < th | dose dependent | no | NA | NA |
| 127 | 73.47 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 11 | 12 |
| 154 | 73.48 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 249 | 73.58 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 6 | NA |
| 332 | 73.74 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 333 | 73.74 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 20 |
| 355 | 73.84 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 361 | 73.87 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 380 | 73.90 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 381 | 73.90 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 383 | 73.91 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 11 |
| 384 | 73.92 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 385 | 73.92 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 388 | 73.92 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 16 |
| 400 | 73.93 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 471 | 73.95 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 472 | 73.95 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 13 |
| 540 | 74.01 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 583 | 74.03 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 8 |
| 590 | 74.04 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 591 | 74.04 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 623 | 74.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 7 |
| 647 | 74.06 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 668 | 74.07 | humidity | 50.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 672 | 74.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 7 |
| 674 | 74.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 7 |
| 678 | 74.08 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 694 | 74.10 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 12 | 3 |
| 701 | 74.12 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 746 | 74.15 | radiation | 20.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 784 | 74.18 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 834 | 74.21 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 844 | 74.21 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 8 | 16 |
| 860 | 74.21 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 866 | 74.21 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 23 | 21 |
| 878 | 74.22 | humidity | 50.0 | 14400 | > th | dose independent | no | NA | NA |