Os02g0123200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0123200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.49 | 0.228 | 11.8 | -0.205 | 0.387 | -0.387 | -0.0123 | -0.512 | -0.0812 | 19.3 | 25.6 | 1504 | -- | -- |
| 23.68 | 0.227 | 11.8 | -0.0911 | 0.406 | -0.439 | -0.0676 | -- | -0.0548 | 19.1 | 25.74 | 1589 | -- | -- |
| 23.5 | 0.226 | 11.8 | -0.204 | 0.387 | -0.388 | -- | -0.511 | -0.0811 | 19.2 | 25.6 | 1506 | -- | -- |
| 23.58 | 0.226 | 11.8 | -0.0667 | 0.396 | -0.451 | -- | -- | -0.0495 | 19.2 | 25.7 | 1529 | -- | -- |
| 31.12 | 0.26 | 11.8 | -0.231 | -- | -0.386 | -- | -0.61 | -0.0914 | -- | 25.28 | 1396 | -- | -- |
| 31.67 | 0.264 | 11.8 | -0.217 | 0.391 | -- | 0.0313 | -- | -0.0888 | 19 | -- | -- | -- | -- |
| 31.67 | 0.264 | 11.8 | -0.218 | 0.391 | -- | -- | -- | -0.0888 | 19 | -- | -- | -- | -- |
| 31.25 | 0.26 | 11.8 | -0.0592 | -- | -0.462 | -- | -- | -0.0219 | -- | 24.32 | 1391 | -- | -- |
| 23.69 | 0.227 | 11.8 | -- | 0.393 | -0.458 | -- | -- | -0.0385 | 19.2 | 25.55 | 1519 | -- | -- |
| 39.71 | 0.294 | 11.8 | -0.226 | -- | -- | -- | -- | -0.096 | -- | -- | -- | -- | -- |
| 32.92 | 0.268 | 11.8 | -- | 0.394 | -- | -- | -- | -0.0645 | 18.9 | -- | -- | -- | -- |
| 31.34 | 0.261 | 11.8 | -- | -- | -0.479 | -- | -- | -0.0129 | -- | 24.25 | 1392 | -- | -- |
| 41.06 | 0.299 | 11.8 | -- | -- | -- | -- | -- | -0.0709 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.01 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 2 | 23.05 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 4 | 23.13 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 7 | 23.23 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 9 | 23.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 10 | 23.27 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 13 | 23.33 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 26 | 23.37 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 17 |
| 36 | 23.44 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 20 |
| 40 | 23.46 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 57 | 23.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 67 | 23.49 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 84 | 23.51 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 14 |
| 103 | 23.52 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 126 | 23.53 | temperature | 25 | 1440 | > th | dose dependent | sin | 4 | NA |
| 163 | 23.53 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 166 | 23.54 | temperature | 25 | 1440 | > th | dose dependent | sin | 2 | NA |
| 168 | 23.54 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 216 | 23.55 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 12 |
| 221 | 23.55 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 16 |
| 226 | 23.55 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 233 | 23.56 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 9 |
| 259 | 23.57 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 261 | 23.57 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 296 | 23.59 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 299 | 23.59 | temperature | 25 | 1440 | > th | dose dependent | rect. | 2 | 8 |
| 322 | 23.61 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 351 | 23.62 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 374 | 23.64 | temperature | 30 | 1440 | < th | dose independent | sin | 7 | NA |
| 389 | 23.65 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 406 | 23.65 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 416 | 23.65 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 13 |
| 438 | 23.66 | temperature | 30 | 14400 | > th | dose dependent | rect. | 18 | 15 |
| 468 | 23.68 | temperature | 30 | 1440 | > th | dose independent | sin | 7 | NA |
| 496 | 23.69 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 515 | 23.70 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 573 | 23.72 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 574 | 23.72 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 644 | 23.75 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 682 | 23.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 9 |
| 683 | 23.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 15 |
| 690 | 23.77 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 733 | 23.78 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 751 | 23.78 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 16 |
| 801 | 23.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 18 |
| 856 | 23.80 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 934 | 23.80 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 949 | 23.80 | temperature | 30 | 14400 | > th | dose dependent | rect. | 18 | 1 |