Os02g0120200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phospholipase D nu-2 (Fragment).
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Os02g0120200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phospholipase D nu-2 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.07 | 0.521 | 3.83 | -0.206 | 0.853 | 0.922 | -0.0304 | -0.107 | 0.478 | 4.06 | 20.7 | 609 | -- | -- |
| 123.11 | 0.517 | 3.83 | -0.184 | 0.854 | 0.931 | -0.0194 | -- | 0.483 | 4.06 | 20.68 | 608 | -- | -- |
| 123.07 | 0.517 | 3.83 | -0.205 | 0.853 | 0.923 | -- | -0.104 | 0.478 | 4.05 | 20.7 | 608 | -- | -- |
| 123.11 | 0.517 | 3.83 | -0.184 | 0.854 | 0.932 | -- | -- | 0.483 | 4.06 | 20.68 | 608 | -- | -- |
| 153.99 | 0.578 | 3.85 | -0.258 | -- | 1 | -- | -0.14 | 0.422 | -- | 21.3 | 1097 | -- | -- |
| 149.72 | 0.574 | 3.78 | 0.144 | 0.814 | -- | -0.102 | -- | 0.694 | 3.46 | -- | -- | -- | -- |
| 149.75 | 0.573 | 3.78 | 0.146 | 0.813 | -- | -- | -- | 0.694 | 3.45 | -- | -- | -- | -- |
| 153.06 | 0.576 | 3.84 | -0.232 | -- | 0.913 | -- | -- | 0.436 | -- | 21.91 | 1087 | -- | -- |
| 123.91 | 0.518 | 3.82 | -- | 0.85 | 0.882 | -- | -- | 0.511 | 4.02 | 20.7 | 603 | -- | -- |
| 186.85 | 0.639 | 3.78 | 0.18 | -- | -- | -- | -- | 0.716 | -- | -- | -- | -- | -- |
| 150.32 | 0.574 | 3.79 | -- | 0.816 | -- | -- | -- | 0.678 | 3.45 | -- | -- | -- | -- |
| 153.53 | 0.577 | 3.85 | -- | -- | 0.902 | -- | -- | 0.445 | -- | 21.94 | 1087 | -- | -- |
| 187.71 | 0.639 | 3.79 | -- | -- | -- | -- | -- | 0.696 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.26 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 2 | 112.92 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 5 | 115.07 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 6 | 115.22 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 7 | 115.42 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 8 | 115.61 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 20 | 117.69 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 30 | 118.88 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 32 | 119.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 33 | 119.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 34 | 119.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 35 | 119.16 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 40 | 119.38 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 59 | 119.80 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 109 | 120.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 111 | 120.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 132 | 120.73 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 138 | 120.80 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 149 | 120.87 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 7 |
| 165 | 120.98 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 166 | 120.98 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 191 | 121.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 192 | 121.21 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 203 | 121.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 204 | 121.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 217 | 121.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 219 | 121.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 245 | 121.48 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 249 | 121.51 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 260 | 121.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 264 | 121.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 274 | 121.63 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 320 | 121.82 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 333 | 121.87 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 339 | 121.90 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 384 | 122.04 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 7 |
| 393 | 122.08 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 417 | 122.17 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 426 | 122.20 | temperature | 20.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 448 | 122.27 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 471 | 122.34 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 479 | 122.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 527 | 122.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 530 | 122.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 531 | 122.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 540 | 122.56 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 9 |
| 545 | 122.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 547 | 122.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 554 | 122.60 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 597 | 122.74 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 612 | 122.78 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 14 |
| 630 | 122.82 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 687 | 122.98 | temperature | 20.0 | 720 | > th | dose independent | rect. | 13 | 17 |
| 845 | 123.32 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 22 |
| 850 | 123.33 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 906 | 123.46 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 935 | 123.51 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 15 |
| 968 | 123.59 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 22 |