BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0120200 Os02g0120200|AK110433
(910 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35790.1 | chr4:16955774-16959875 REVERSE LENGTH=869 261 1e-69
AT2G42010.1 | chr2:17533018-17537990 REVERSE LENGTH=1084 209 4e-54
AT4G00240.1 | chr4:106380-110718 REVERSE LENGTH=928 198 1e-50
AT4G11840.1 | chr4:7122152-7125882 REVERSE LENGTH=867 196 4e-50
AT4G11830.2 | chr4:7115985-7119683 REVERSE LENGTH=857 191 1e-48
AT4G11850.1 | chr4:7129352-7132937 REVERSE LENGTH=859 189 5e-48
AT1G52570.1 | chr1:19583940-19586551 REVERSE LENGTH=811 157 2e-38
AT3G15730.1 | chr3:5330835-5333474 FORWARD LENGTH=811 153 4e-37
AT5G25370.1 | chr5:8804240-8807547 REVERSE LENGTH=821 132 9e-31
AT1G55180.1 | chr1:20585057-20587629 REVERSE LENGTH=763 102 1e-21
>AT4G35790.1 | chr4:16955774-16959875 REVERSE LENGTH=869
Length = 868
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/371 (42%), Positives = 197/371 (53%), Gaps = 37/371 (9%)
Query: 33 LLHGDLDLTIHEARGLPNMDFLSTXXXXXXXXXXXXXXXXSPGQSRGSVPAD--EDGRRQ 90
LLHGDLDL I +AR LPNMD S P + P D E G +
Sbjct: 11 LLHGDLDLKIVKARRLPNMDMFS---EHLRRLFTACNACARPTDTDDVDPRDKGEFGDKN 67
Query: 91 PHGHHLLPTSDPYAAVVVAGNTLARTHVVRDSEDPEWSTHVXXXXXXXXTGVAFHVKDAD 150
H + TSDPY VVV TLART V+++S++P W + F VKD D
Sbjct: 68 IRSHRKVITSDPYVTVVVPQATLARTRVLKNSQEPLWDEKFNISIAHPFAYLEFQVKDDD 127
Query: 151 PFGSDLIGXXXXXXXXXXXXXXXXXVRRELPLYRPDGRGRPKPSSAIVITASFVPAGEHQ 210
FG+ +IG + P+ G+ PK +AI I F P +
Sbjct: 128 VFGAQIIGTAKIPVRDIASGER---ISGWFPVLGASGKP-PKAETAIFIDMKFTPFDQIH 183
Query: 211 SIY-----DAEHGGVPAAYFPARRGCEVKLYQDAHVAGGELD--GVRRRGVFEPGRCWED 263
S D E GV YFP R+G +V+LYQDAHV G L G+ V+E G+CWED
Sbjct: 184 SYRCGIAGDPERRGVRRTYFPVRKGSQVRLYQDAHVMDGTLPAIGLDNGKVYEHGKCWED 243
Query: 264 MCLAVLGAQHLVYVAGWSVNTKVRLVREAMSPEMAAKVEEVRTTATDDDDNPVAAEGMSL 323
+C A+ A H++Y+ GWS+ K++LVRE P D D M+L
Sbjct: 244 ICYAISEAHHMIYIVGWSIFHKIKLVRETKVPR--------------DKD-------MTL 282
Query: 324 GALLKYKSQEGVRVCLLVWDDKTSHDTFFLKTGGLMQTHDEETKKFFKDSSVICLLSPRY 383
G LLKYKSQEGVRV LLVWDDKTSHD F +KT G+M THDEET+KFFK SSVIC+LSPRY
Sbjct: 283 GELLKYKSQEGVRVLLLVWDDKTSHDKFGIKTPGVMGTHDEETRKFFKHSSVICVLSPRY 342
Query: 384 PSSKLSMAKQK 394
SSKL + KQ+
Sbjct: 343 ASSKLGLFKQQ 353
>AT2G42010.1 | chr2:17533018-17537990 REVERSE LENGTH=1084
Length = 1083
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 135/373 (36%), Positives = 183/373 (49%), Gaps = 58/373 (15%)
Query: 33 LLHGDLDLTIHEARGLPNMDFLSTXXXXXXXXXXXXXXXXSPGQSRGSVPADEDGRRQPH 92
LLHG+LD+ I+ A+ LPNMD G G +P +G+
Sbjct: 270 LLHGNLDIWIYHAKNLPNMDMFHKTL----------------GDMFGRLPGKIEGQLTSK 313
Query: 93 GHHLLPTSDPYAAVVVAGNTLARTHVVRDSEDPEWSTHVXXXXXXXXTGVAFHVKDADPF 152
TSDPY +V VAG + RT+V+ +SE+P W H V F VKD+D
Sbjct: 314 -----ITSDPYVSVSVAGAVIGRTYVMSNSENPVWMQHFYVPVAHHAAEVHFVVKDSDVV 368
Query: 153 GSDLIGXXXXXXXXXXXXXXXXXVRRELPLYRPDGRGRP-KPSSAIVITASFVPAGEHQS 211
GS LIG + P+ + G+P KP + + ++ + P + S
Sbjct: 369 GSQLIGLVTIPVEQIYSGAK---IEGTYPIL--NSNGKPCKPGANLSLSIQYTPM-DKLS 422
Query: 212 IYD------AEHGGVPAAYFPARRGCEVKLYQDAHVAGGELDGVRRRG--VFEPGRCWED 263
+Y ++ GVP YFP R+G V+LYQDAHV G L G+R +E G+CW D
Sbjct: 423 VYHHGVGAGPDYQGVPGTYFPLRKGGTVRLYQDAHVPEGMLPGIRLDNGMSYEHGKCWHD 482
Query: 264 MCLAVLGAQHLVYVAGWSVNTKVRLVREAMSPEMAAKVEEVRTTATDDDDNPVAAEGMSL 323
M A+ A+ L+Y+ GWSV KV+L+R+ + P A +L
Sbjct: 483 MFDAIRQARRLIYITGWSVWHKVKLIRDKLGP----------------------ASECTL 520
Query: 324 GALLKYKSQEGVRVCLLVWDDKTSHDTFFLKTGGLMQTHDEETKKFFKDSSVICLLSPRY 383
G LL+ KSQEGVRV LL+WDD TS KT G+M THDEET++FFK SSV LL PR
Sbjct: 521 GELLRSKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRN 580
Query: 384 PSSKLSMAKQKRA 396
+ S KQ+
Sbjct: 581 AGKRHSWVKQREV 593
>AT4G00240.1 | chr4:106380-110718 REVERSE LENGTH=928
Length = 927
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 175/371 (47%), Gaps = 58/371 (15%)
Query: 33 LLHGDLDLTIHEARGLPNMDFLSTXXXXXXXXXXXXXXXXSPGQSRGSVPADEDGRRQPH 92
LLHG+LD+ + A LPN+D + G G + +G+
Sbjct: 114 LLHGNLDIWVSCANNLPNLDLFHK----------------TLGVVFGGMTNMIEGQLSKK 157
Query: 93 GHHLLPTSDPYAAVVVAGNTLARTHVVRDSEDPEWSTHVXXXXXXXXTGVAFHVKDADPF 152
TSDPY ++ VAG + RT+V+ +SE+P W H V F VKD+D
Sbjct: 158 -----ITSDPYVSISVAGAVIGRTYVISNSENPVWQQHFYVPVAHHAAEVHFVVKDSDAV 212
Query: 153 GSDLIGXXXXXXXXXXXXXXXXXVRRELPLYRPDGRGRP-KPSSAIVITASFVPAGEHQS 211
GS LIG R E D G+P KP + + ++ + + S
Sbjct: 213 GSQLIGIVTIPVEQIYSG-----ARIEGTYSIRDSNGKPCKPGATLSLSIQYTSMNK-LS 266
Query: 212 IYDA------EHGGVPAAYFPARRGCEVKLYQDAHVAGGELDGVRRRG--VFEPGRCWED 263
+Y + + GVP YFP R G V LYQDAHV G L G++ +E G+CW D
Sbjct: 267 VYHSGVGAGPYYQGVPGTYFPLREGGSVTLYQDAHVPEGMLPGIKLGNGMCYEHGKCWHD 326
Query: 264 MCLAVLGAQHLVYVAGWSVNTKVRLVREAMSPEMAAKVEEVRTTATDDDDNPVAAEGMSL 323
M A+ A+ L+Y+ GWSV VRLVR+ P + L
Sbjct: 327 MFHAICQARRLIYITGWSVWHNVRLVRDKEDPSSECR----------------------L 364
Query: 324 GALLKYKSQEGVRVCLLVWDDKTSHDTFFLKTGGLMQTHDEETKKFFKDSSVICLLSPRY 383
G LL+ KSQEGVRV LLVWDD TS + T G+M THDEET++FFKDSSV LL PR
Sbjct: 365 GELLRSKSQEGVRVLLLVWDDPTSQNILGYMTDGVMGTHDEETRRFFKDSSVQVLLCPRN 424
Query: 384 PSSKLSMAKQK 394
+ S KQ+
Sbjct: 425 AGKRHSWVKQR 435
>AT4G11840.1 | chr4:7122152-7125882 REVERSE LENGTH=867
Length = 866
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 176/390 (45%), Gaps = 58/390 (14%)
Query: 21 ELSPPAAASGT---RLLHGDLDLTIHEARGLPNMDFLSTXXXXXXXXXXXXXXXXSPGQS 77
+L P +SG+ LLHG+LD+ + EA+ LPNMD G++
Sbjct: 28 QLVPFDTSSGSLRVELLHGNLDIWVKEAKHLPNMDGFHNTLVGGMFFGLGRRNHKVDGEN 87
Query: 78 RGSVPADEDGRRQPHGHHLLPTSDPYAAVVVAGNTLARTHVVRDSEDPEWSTHVXXXXXX 137
+ TSDPY V ++G + RT V+ +SE+P W H
Sbjct: 88 SSKI-----------------TSDPYVTVSISGAVIGRTFVISNSENPVWMQHFDVPVAH 130
Query: 138 XXTGVAFHVKDADPFGSDLIGXXXXXXXXXXXXXXXXXVRRELPLYRPDGRGRP-KPSSA 196
V F VKD+D GS +IG + P+ + RG+P K +
Sbjct: 131 SAAKVHFVVKDSDIIGSQIIGAVEIPTEQLCSGNRIEGL---FPIL--NSRGKPCKQGAV 185
Query: 197 IVITASFVPAGEHQSIYD------AEHGGVPAAYFPARRGCEVKLYQDAHVAGGELDGVR 250
+ ++ ++P E +Y E GVP YFP R+G V LYQDAHV G L V
Sbjct: 186 LSLSIQYIPM-ERMRLYQKGVGFGVECVGVPGTYFPLRKGGRVTLYQDAHVDDGTLPSVH 244
Query: 251 RRG--VFEPGRCWEDMCLAVLGAQHLVYVAGWSVNTKVRLVREAMSPEMAAKVEEVRTTA 308
G + G+CWEDM A+ A+ L+Y+ GWSV VRLVR P
Sbjct: 245 LDGGIQYRHGKCWEDMADAIRRARRLIYITGWSVFHPVRLVRRNNDPTQG---------- 294
Query: 309 TDDDDNPVAAEGMSLGALLKYKSQEGVRVCLLVWDDKTSHDTFFLKTGGLMQTHDEETKK 368
+LG LLK KSQEGVRV +LVWDD TS T GLM T DEET++
Sbjct: 295 -------------TLGELLKVKSQEGVRVLVLVWDDPTSRSLLGFSTKGLMNTSDEETRR 341
Query: 369 FFKDSSVICLLSPRYPSSKLSMAKQKRADC 398
FFK SSV LL PRY S K+ +
Sbjct: 342 FFKHSSVQVLLCPRYGGKGHSFIKKSEVET 371
>AT4G11830.2 | chr4:7115985-7119683 REVERSE LENGTH=857
Length = 856
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 180/392 (45%), Gaps = 63/392 (16%)
Query: 21 ELSPPAAASGT---RLLHGDLDLTIHEARGLPNMDFLSTXXXXXXXXXXXXXXXXSPGQS 77
+L P A +SG+ LLHG+LD+ + EA+ LPNM
Sbjct: 18 QLVPLATSSGSLMVELLHGNLDIWVKEAKHLPNMICYRNKLV------------------ 59
Query: 78 RGSVPADEDGRR--QPHGHHLLP-TSDPYAAVVVAGNTLARTHVVRDSEDPEWSTHVXXX 134
G + E GRR + G TSDPY V ++G + RT V+ +SE+P W H
Sbjct: 60 -GGISFSELGRRIRKVDGEKSSKFTSDPYVTVSISGAVIGRTFVISNSENPVWMQHFDVP 118
Query: 135 XXXXXTGVAFHVKDADPFGSDLIGXXXXXXXXXXXXXXXXXVRRELPLYRPDGRGRPKPS 194
V F VKD DP GS +IG + P+ + G+P
Sbjct: 119 VAHSAAEVHFVVKDNDPIGSKIIGVVGIPTKQLCSGNRIEGL---FPIL--NSSGKPCRK 173
Query: 195 SAIV-ITASFVPAGEHQSIYD------AEHGGVPAAYFPARRGCEVKLYQDAHVAGGELD 247
A++ ++ + P E +Y E GVP YFP R+G V LYQDAHV G L
Sbjct: 174 GAMLSLSIQYTPM-ERMRLYQKGVGSGVECVGVPGTYFPLRKGGRVTLYQDAHVDDGTLP 232
Query: 248 GVRRRG--VFEPGRCWEDMCLAVLGAQHLVYVAGWSVNTKVRLVREAMSPEMAAKVEEVR 305
V G + G+CWEDM A+ A+ L+Y+ GWSV VRLVR P
Sbjct: 233 SVHLDGGIQYRHGKCWEDMADAIRRARRLIYITGWSVFHPVRLVRRNNDP---------- 282
Query: 306 TTATDDDDNPVAAEGMSLGALLKYKSQEGVRVCLLVWDDKTSHDTFFLKTGGLMQTHDEE 365
EG +LG LLK KSQEGVRV +LVWDD TS T GLM T DEE
Sbjct: 283 ------------TEG-TLGELLKVKSQEGVRVLVLVWDDPTSMSFPGFSTKGLMNTSDEE 329
Query: 366 TKKFFKDSSVICLLSPRYPSSKLSMAKQKRAD 397
T++FFK SSV LL PRY S K+ +
Sbjct: 330 TRRFFKHSSVQVLLCPRYGGKGHSFIKKSEVE 361
>AT4G11850.1 | chr4:7129352-7132937 REVERSE LENGTH=859
Length = 858
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 174/374 (46%), Gaps = 61/374 (16%)
Query: 21 ELSPPAAASGT---RLLHGDLDLTIHEARGLPNMDFLSTXXXXXXXXXXXXXXXXSPGQS 77
+ P A +SG+ LLHG+LD+ + EA+ LPNMD G
Sbjct: 24 QYVPFATSSGSLRVELLHGNLDIWVKEAKHLPNMDGFHNRLGGMLS-----------GLG 72
Query: 78 RGSVPADEDGRRQPHGHHLLPTSDPYAAVVVAGNTLARTHVVRDSEDPEWSTHVXXXXXX 137
R V ++ + TSDPY V ++G + RT V+ +SE+P W H
Sbjct: 73 RKKVEGEKSSK---------ITSDPYVTVSISGAVIGRTFVISNSENPVWMQHFDVPVAH 123
Query: 138 XXTGVAFHVKDADPFGSDLIGXXXXXXXXXXXXXXXXXVRRELPLYRPDGRGRPKPSSAI 197
V F VKD+D GS ++G + P+ + G+P A+
Sbjct: 124 SAAEVHFVVKDSDIIGSQIMGAVGIPTEQLCSGNRIEGL---FPIL--NSSGKPCKQGAV 178
Query: 198 V-ITASFVPAGEHQSIYDA------EHGGVPAAYFPARRGCEVKLYQDAHVAGGELDGVR 250
+ ++ + P E +Y E GVP YFP R+G V LYQDAHV G L V
Sbjct: 179 LGLSIQYTPM-ERMRLYQMGVGSGNECVGVPGTYFPLRKGGRVTLYQDAHVDDGTLPSVH 237
Query: 251 RRG--VFEPGRCWEDMCLAVLGAQHLVYVAGWSVNTKVRLVREAMSPEMAAKVEEVRTTA 308
G + G+CWEDM A+ A+ L+Y+ GWSV VRLVR P
Sbjct: 238 LDGGIQYRHGKCWEDMADAIRQARRLIYITGWSVFHPVRLVRRTNDP------------- 284
Query: 309 TDDDDNPVAAEGMSLGALLKYKSQEGVRVCLLVWDDKTSHDTFFLKTGGLMQTHDEETKK 368
EG +LG LLK KSQEGVRV +LVWDD TS KT G+M T DEET++
Sbjct: 285 ---------TEG-TLGELLKVKSQEGVRVLVLVWDDPTSRSLLGFKTQGVMNTSDEETRR 334
Query: 369 FFKDSSVICLLSPR 382
FFK SSV LL PR
Sbjct: 335 FFKHSSVQVLLCPR 348
>AT1G52570.1 | chr1:19583940-19586551 REVERSE LENGTH=811
Length = 810
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 148/299 (49%), Gaps = 35/299 (11%)
Query: 103 YAAVVVAGNTLARTH-VVRDSEDPEWSTHVXXXXXXXXTGVAFHVKDADPFGSDLIGXXX 161
YA + + + RT + ++ ++P+W V F VKDA+P G+ LIG
Sbjct: 51 YATIDLEKARVGRTRKITKEPKNPKWFESFHIYCGHMAKHVIFTVKDANPIGATLIGRGY 110
Query: 162 XXXXXXXXXXXXXXVRRELPLYRPDGRGRPKPS-SAIVITASFVPAGEHQS----IYDAE 216
V R + + D P S I + + + ++ I A+
Sbjct: 111 IPVEDILHGEE---VDRWVDIL--DNEKNPIAGGSKIHVKLQYFGVEKDKNWNRGIKSAK 165
Query: 217 HGGVPAAYFPARRGCEVKLYQDAHVAGGELDGVRRRG--VFEPGRCWEDMCLAVLGAQHL 274
GVP +F RRGC+V LYQDAH+ G + + G +EP RCWED+ A+ A+HL
Sbjct: 166 FPGVPYTFFSQRRGCKVSLYQDAHIPGNFVPKIPLAGGKNYEPHRCWEDIFDAITNAKHL 225
Query: 275 VYVAGWSVNTKVRLVREAMSPEMAAKVEEVRTTATDDDDNPVAAEGMSLGALLKYKSQEG 334
+Y+ GWSV T++ LVR++ P+ V ++G LLK K+ EG
Sbjct: 226 IYITGWSVYTEISLVRDSRRPKQGGDV--------------------TVGELLKKKASEG 265
Query: 335 VRVCLLVWDDKTSHDTFFLKTGGLMQTHDEETKKFFKDSSVICLLSPRYPSSKLSMAKQ 393
V+V LLVWDD+TS D LK GLM THDEET+ FF+ + V C+L PR P S+ +
Sbjct: 266 VKVILLVWDDRTSVD--LLKKDGLMATHDEETENFFRGTDVNCILCPRNPDDGGSIVQN 322
>AT3G15730.1 | chr3:5330835-5333474 FORWARD LENGTH=811
Length = 810
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 144/289 (49%), Gaps = 33/289 (11%)
Query: 103 YAAVVVAGNTLARTHVVRDS-EDPEWSTHVXXXXXXXXTGVAFHVKDADPFGSDLIGXXX 161
YA + + + RT +++ ++P+W + + F VKD +P G+ LIG
Sbjct: 51 YATIDLQKARVGRTRKIKNEPKNPKWYESFHIYCAHLASDIIFTVKDDNPIGATLIGRAY 110
Query: 162 XXXXXXXXXXXXXXVRRELPLYRPDGRGRPKPSSAIVITASFVPAGEHQS----IYDAEH 217
V + + + D R + S I + + E ++ I A+
Sbjct: 111 IPVDQVINGEE---VDQWVEILDND-RNPIQGGSKIHVKLQYFHVEEDRNWNMGIKSAKF 166
Query: 218 GGVPAAYFPARRGCEVKLYQDAHVAGGELDGVRRRG--VFEPGRCWEDMCLAVLGAQHLV 275
GVP +F R+GC+V LYQDAH+ + + G +EP RCWED+ A+ A+HL+
Sbjct: 167 PGVPYTFFSQRQGCKVSLYQDAHIPDNFVPRIPLAGGKNYEPQRCWEDIFDAISNAKHLI 226
Query: 276 YVAGWSVNTKVRLVREAMSPEMAAKVEEVRTTATDDDDNPVAAEGMSLGALLKYKSQEGV 335
Y+ GWSV ++ LVR++ P+ V ++G LLK K+ EGV
Sbjct: 227 YITGWSVYAEIALVRDSRRPKPGGDV--------------------TIGELLKKKASEGV 266
Query: 336 RVCLLVWDDKTSHDTFFLKTGGLMQTHDEETKKFFKDSSVICLLSPRYP 384
RV LLVWDD+TS D LK GLM THDEET+ FF+ S V C+L PR P
Sbjct: 267 RVLLLVWDDRTSVDV--LKKDGLMATHDEETENFFRGSDVHCILCPRNP 313
>AT5G25370.1 | chr5:8804240-8807547 REVERSE LENGTH=821
Length = 820
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 134/292 (45%), Gaps = 27/292 (9%)
Query: 103 YAAVVVAGNTLARTHVVRDSEDPEWSTHVXXXXXXXXTGVAFHVKDADPFGSDLIGXXXX 162
YA + + + +ART + R P+W + + F VK+ +P + LIG
Sbjct: 62 YATIDLDRSRVARTMMRRH---PKWLQSFHVYTAHSISKIIFTVKEDEPVSASLIGRAYL 118
Query: 163 XXXXXXXXXXXXXVRRELPLYRPDGRGRPKPSSAIVITASFVPAGEHQSIYDAEHGGVPA 222
L R +G K + T ++ I GVP
Sbjct: 119 PVTEVITGQPIDRWLDILDENRRPIQGGSKLHVRVKFTHVTQDVNWNKGIILPSFNGVPN 178
Query: 223 AYFPARRGCEVKLYQDAHVAGGELDGVRRRG--VFEPGRCWEDMCLAVLGAQHLVYVAGW 280
AYF R GC+V LYQDAHV D G +++ RCWE++ A+ A+HL+Y+AGW
Sbjct: 179 AYFNQREGCKVTLYQDAHVLNEYPDVTLTGGQVIYKHHRCWEEIFDAIWEAKHLIYIAGW 238
Query: 281 SVNTKVRLVREAMSPEMAAKVEEVRTTATDDDDNPVAAEGMSLGALLKYKSQEGVRVCLL 340
SVNT V LVR+ RT D + K++E V V +L
Sbjct: 239 SVNTDVTLVRDPK-----------RTRPGGDLKLGELLKK---------KAEENVTVLML 278
Query: 341 VWDDKTSHDTFFLKTGGLMQTHDEETKKFFKDSSVICLLSPRYPSSKLSMAK 392
VWDD+TSH+ F K GLM THD+ET +FK++ V C+L PR P + S+ +
Sbjct: 279 VWDDRTSHEVF--KRDGLMMTHDQETYDYFKNTKVRCVLCPRNPDNGDSIVQ 328
>AT1G55180.1 | chr1:20585057-20587629 REVERSE LENGTH=763
Length = 762
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 22/181 (12%)
Query: 202 SFVPAGEHQSIYDAEHGGVPAAYFPARRGCEVKLYQDAHVAGGELDGVRRRGVFEPGRCW 261
+++ G +++ +A G+ A FP R C V LYQDAH D F W
Sbjct: 136 AYLEPGWCRALEEASFQGIRNASFPQRSNCRVVLYQDAH-HKATFDPRVDDVPFNARNLW 194
Query: 262 EDMCLAVLGAQHLVYVAGWSVNTKVRLVREAMSPEMAAKVEEVRTTATDDDDNPVAAEGM 321
ED+ A+ A+HLVY+AGW++N + LVR D++ A G+
Sbjct: 195 EDVYKAIESARHLVYIAGWALNPNLVLVR-------------------DNETEIPHAVGV 235
Query: 322 SLGALLKYKSQEGVRVCLLVWDDKTSHDTFFLKTGGLMQTHDEETKKFFKDSSVICLLSP 381
++G LLK KS+EGV V +++W+D+TS +K G+M+T+ E +F++++V+C L P
Sbjct: 236 TVGELLKRKSEEGVAVRVMLWNDETSLP--MIKNKGVMRTNVERALAYFRNTNVVCRLCP 293
Query: 382 R 382
R
Sbjct: 294 R 294
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.136 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,092,977
Number of extensions: 470472
Number of successful extensions: 903
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 870
Number of HSP's successfully gapped: 10
Length of query: 910
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 802
Effective length of database: 8,145,641
Effective search space: 6532804082
Effective search space used: 6532804082
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 116 (49.3 bits)