Os02g0119300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase M14, carboxypeptidase A family protein.
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Os02g0119300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase M14, carboxypeptidase A family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.99 | 0.205 | 10.1 | -0.67 | 0.236 | 0.397 | -0.418 | 0.0432 | 0.0733 | 6.78 | 20.06 | 255 | -- | -- |
| 18.99 | 0.203 | 10.1 | -0.671 | 0.234 | 0.386 | -0.434 | -- | 0.0716 | 6.79 | 20.1 | 248 | -- | -- |
| 19.22 | 0.204 | 10.1 | -0.675 | 0.246 | 0.426 | -- | 0.125 | 0.0706 | 5.88 | 20.1 | 245 | -- | -- |
| 19.24 | 0.204 | 10.1 | -0.678 | 0.24 | 0.402 | -- | -- | 0.0728 | 5.63 | 20.1 | 174 | -- | -- |
| 22.17 | 0.219 | 10.1 | -0.668 | -- | 0.38 | -- | 0.0368 | 0.0839 | -- | 19.8 | 175 | -- | -- |
| 23.48 | 0.227 | 10.1 | -0.538 | 0.181 | -- | -0.642 | -- | 0.143 | 8.01 | -- | -- | -- | -- |
| 24.45 | 0.232 | 10.1 | -0.559 | 0.198 | -- | -- | -- | 0.142 | 6.72 | -- | -- | -- | -- |
| 22.01 | 0.219 | 10.1 | -0.635 | -- | 0.312 | -- | -- | 0.0875 | -- | 20.41 | 139 | -- | -- |
| 30.05 | 0.257 | 10.1 | -- | 0.2 | 0.242 | -- | -- | 0.165 | 5.8 | 20.6 | 131 | -- | -- |
| 26.5 | 0.241 | 10.1 | -0.554 | -- | -- | -- | -- | 0.146 | -- | -- | -- | -- | -- |
| 32.67 | 0.267 | 10.1 | -- | 0.192 | -- | -- | -- | 0.205 | 6.9 | -- | -- | -- | -- |
| 32.12 | 0.265 | 10.1 | -- | -- | 0.227 | -- | -- | 0.171 | -- | 20.6 | 131 | -- | -- |
| 34.6 | 0.275 | 10.1 | -- | -- | -- | -- | -- | 0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.85 | temperature | 20 | 270 | > th | dose independent | sin | 14 | NA |
| 2 | 17.85 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 13 |
| 6 | 18.00 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 12 |
| 14 | 18.18 | temperature | 20 | 270 | > th | dose independent | rect. | 9 | 22 |
| 15 | 18.20 | temperature | 20 | 720 | > th | dose independent | rect. | 11 | 11 |
| 24 | 18.36 | temperature | 20 | 270 | < th | dose independent | rect. | 14 | 16 |
| 25 | 18.36 | temperature | 20 | 270 | < th | dose independent | rect. | 11 | 19 |
| 42 | 18.41 | temperature | 20 | 720 | > th | dose independent | sin | 20 | NA |
| 50 | 18.45 | temperature | 20 | 270 | < th | dose independent | sin | 13 | NA |
| 62 | 18.49 | temperature | 20 | 10 | > th | dose independent | sin | 11 | NA |
| 107 | 18.66 | temperature | 20 | 720 | > th | dose independent | rect. | 13 | 9 |
| 130 | 18.77 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 144 | 18.81 | temperature | 20 | 270 | > th | dose independent | rect. | 16 | 23 |
| 163 | 18.85 | temperature | 20 | 720 | < th | dose independent | rect. | 11 | 13 |
| 176 | 18.87 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 14 |
| 178 | 18.88 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 6 |
| 184 | 18.89 | temperature | 20 | 10 | < th | dose independent | rect. | 15 | 18 |
| 186 | 18.89 | temperature | 25 | 720 | < th | dose dependent | sin | 19 | NA |
| 213 | 18.94 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 11 |
| 250 | 19.00 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 261 | 19.01 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 268 | 19.01 | temperature | 20 | 270 | < th | dose independent | rect. | 4 | 23 |
| 284 | 19.03 | temperature | 20 | 270 | < th | dose independent | rect. | 18 | 23 |
| 312 | 19.05 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 23 |
| 408 | 19.12 | temperature | 25 | 10 | < th | dose dependent | sin | 15 | NA |
| 431 | 19.15 | temperature | 20 | 10 | < th | dose independent | sin | 11 | NA |
| 434 | 19.15 | temperature | 20 | 720 | < th | dose independent | sin | 19 | NA |
| 444 | 19.15 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 23 |
| 460 | 19.16 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 21 |
| 571 | 19.23 | temperature | 20 | 270 | < th | dose dependent | sin | 12 | NA |
| 573 | 19.23 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 17 |
| 587 | 19.24 | temperature | 15 | 270 | > th | dose dependent | sin | 13 | NA |
| 675 | 19.29 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 677 | 19.29 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 686 | 19.30 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 23 |
| 810 | 19.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 18 |
| 878 | 19.41 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 23 |
| 893 | 19.42 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 23 |
| 895 | 19.42 | temperature | 10 | 10 | > th | dose dependent | sin | 12 | NA |
| 909 | 19.43 | temperature | 20 | 10 | < th | dose independent | rect. | 10 | 23 |
| 962 | 19.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 15 |
| 974 | 19.46 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 13 |