Os02g0117800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to APG5 (Autophagy 5) like protein.
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Os02g0117800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to APG5 (Autophagy 5) like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.98 | 0.239 | 9.21 | -0.363 | 0.0905 | 0.638 | 0.371 | 0.03 | -0.0455 | 16.1 | 21.6 | 2113 | -- | -- |
| 25.98 | 0.237 | 9.21 | -0.372 | 0.0923 | 0.636 | 0.37 | -- | -0.0479 | 16.1 | 21.58 | 2134 | -- | -- |
| 26.36 | 0.239 | 9.21 | -0.366 | 0.0957 | 0.644 | -- | 0.0212 | -0.0466 | 15.6 | 21.59 | 2149 | -- | -- |
| 26.36 | 0.239 | 9.21 | -0.372 | 0.0965 | 0.643 | -- | -- | -0.048 | 15.6 | 21.55 | 2157 | -- | -- |
| 26.83 | 0.241 | 9.21 | -0.357 | -- | 0.639 | -- | 0.0467 | -0.0443 | -- | 21.58 | 2084 | -- | -- |
| 37.81 | 0.288 | 9.17 | -0.0707 | 0.0895 | -- | 0.468 | -- | 0.147 | 17 | -- | -- | -- | -- |
| 38.36 | 0.29 | 9.17 | -0.07 | 0.0945 | -- | -- | -- | 0.149 | 17.6 | -- | -- | -- | -- |
| 26.83 | 0.241 | 9.21 | -0.37 | -- | 0.637 | -- | -- | -0.048 | -- | 21.56 | 2084 | -- | -- |
| 28.95 | 0.251 | 9.2 | -- | 0.104 | 0.5 | -- | -- | 0.00735 | 16.1 | 22.23 | 2124 | -- | -- |
| 38.82 | 0.291 | 9.17 | -0.0731 | -- | -- | -- | -- | 0.147 | -- | -- | -- | -- | -- |
| 38.49 | 0.29 | 9.17 | -- | 0.0956 | -- | -- | -- | 0.157 | 17.5 | -- | -- | -- | -- |
| 29.47 | 0.253 | 9.2 | -- | -- | 0.481 | -- | -- | 0.00746 | -- | 22.25 | 2069 | -- | -- |
| 38.96 | 0.291 | 9.16 | -- | -- | -- | -- | -- | 0.155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 2 | 26.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 5 | 26.83 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 6 | 26.83 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 9 |
| 9 | 26.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 37 | 26.92 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 148 | 27.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 291 | 27.27 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 345 | 27.33 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 353 | 27.34 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 374 | 27.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 508 | 27.51 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 641 | 27.67 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 725 | 27.76 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 828 | 27.89 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 20 |