Os02g0108100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0108100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 345.34 | 0.873 | 5.32 | 1.85 | 4.02 | 2.3 | 0.502 | 1.88 | 0.456 | 22.4 | 0.1973 | 1416 | -- | -- |
| 346.72 | 0.867 | 5.31 | 2.03 | 3.98 | 1.8 | 0.447 | -- | 0.456 | 22.4 | 0.1897 | 1417 | -- | -- |
| 346.29 | 0.867 | 5.32 | 1.83 | 4 | 2.23 | -- | 1.71 | 0.454 | 22.4 | 0.2087 | 1417 | -- | -- |
| 347.23 | 0.868 | 5.31 | 1.99 | 3.97 | 1.79 | -- | -- | 0.457 | 22.4 | 0.19 | 1415 | -- | -- |
| 578.09 | 1.13 | 5.22 | 1.61 | -- | 2.59 | -- | -0.64 | 0.337 | -- | 1.963 | 1627 | -- | -- |
| 383.52 | 0.918 | 5.33 | 1.49 | 3.88 | -- | 0.228 | -- | 0.269 | 22.4 | -- | -- | -- | -- |
| 383.73 | 0.917 | 5.33 | 1.49 | 3.88 | -- | -- | -- | 0.268 | 22.4 | -- | -- | -- | -- |
| 580.7 | 1.13 | 5.22 | 1.6 | -- | 2.58 | -- | -- | 0.334 | -- | 1.963 | 1627 | -- | -- |
| 433.33 | 0.97 | 5.34 | -- | 3.97 | 0.754 | -- | -- | 0.211 | 22.4 | 2.1 | 1403 | -- | -- |
| 1303.56 | 1.69 | 5.23 | 1.55 | -- | -- | -- | -- | 0.28 | -- | -- | -- | -- | -- |
| 441.87 | 0.983 | 5.37 | -- | 3.89 | -- | -- | -- | 0.103 | 22.4 | -- | -- | -- | -- |
| 641.28 | 1.18 | 5.25 | -- | -- | 2.59 | -- | -- | 0.174 | -- | 2.52 | 1641 | -- | -- |
| 1366.73 | 1.73 | 5.27 | -- | -- | -- | -- | -- | 0.109 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 328.37 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 8 | 344.51 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 8 |
| 15 | 344.63 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 18 | 344.68 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 22 | 344.76 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 32 | 344.95 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 11 |
| 39 | 345.07 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 17 |
| 60 | 345.24 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 20 |
| 84 | 345.50 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 8 |
| 85 | 345.51 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 110 | 345.61 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 127 | 345.69 | radiation | 1.0 | 1440 | > th | dose independent | sin | 17 | NA |
| 137 | 345.80 | radiation | 1.0 | 1440 | < th | dose independent | sin | 17 | NA |
| 138 | 345.81 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 10 | 14 |
| 140 | 345.83 | temperature | 25.0 | 720 | < th | dose independent | rect. | 9 | 16 |
| 148 | 346.02 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 9 |
| 167 | 346.12 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 11 |
| 174 | 346.13 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 15 | 9 |
| 178 | 346.15 | temperature | 25.0 | 720 | > th | dose independent | rect. | 11 | 13 |
| 195 | 346.20 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 203 | 346.22 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 17 |
| 230 | 346.38 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 279 | 346.70 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 291 | 346.82 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 292 | 346.82 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 295 | 346.84 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 316 | 347.04 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 317 | 347.07 | wind | 7.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 328 | 347.21 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 331 | 347.28 | wind | 7.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 333 | 347.29 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 350 | 347.36 | wind | 7.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 353 | 347.41 | wind | 7.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 364 | 347.52 | temperature | 25.0 | 720 | < th | dose independent | sin | 18 | NA |
| 401 | 347.71 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 424 | 347.85 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 435 | 347.93 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 443 | 348.04 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 454 | 348.13 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 457 | 348.16 | temperature | 25.0 | 720 | > th | dose independent | sin | 18 | NA |
| 461 | 348.17 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 464 | 348.20 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 466 | 348.20 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 472 | 348.25 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 504 | 348.47 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 24 | 17 |
| 518 | 348.60 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 14 |
| 532 | 348.68 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 533 | 348.68 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 547 | 348.79 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 567 | 348.89 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 596 | 348.97 | temperature | 25.0 | 720 | < th | dose independent | rect. | 14 | 9 |
| 661 | 349.18 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 16 |
| 685 | 349.26 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 720 | 349.32 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 724 | 349.32 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 739 | 349.35 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 9 | 3 |
| 773 | 349.42 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 830 | 349.51 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 835 | 349.52 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 845 | 349.53 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 11 | 5 |
| 855 | 349.54 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 19 |
| 858 | 349.55 | humidity | 50.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 894 | 349.60 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 928 | 349.63 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 940 | 349.64 | radiation | 1.0 | 1440 | < th | dose dependent | no | NA | NA |
| 953 | 349.66 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 986 | 349.71 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 1 |