Os02g0107200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Diphosphomevalonate decarboxylase family protein.
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Os02g0107200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Diphosphomevalonate decarboxylase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.46 | 0.437 | 7.67 | 1.43 | 0.727 | -0.899 | -1.53 | 3.53 | 0.583 | 5.34 | 26.2 | 1482 | -- | -- |
| 89.74 | 0.441 | 7.79 | 0.531 | 0.766 | -0.545 | -1.43 | -- | 0.381 | 5.2 | 26.3 | 1350 | -- | -- |
| 92.22 | 0.447 | 7.67 | 1.44 | 0.712 | -0.938 | -- | 3.62 | 0.59 | 5.27 | 26.3 | 1498 | -- | -- |
| 95.06 | 0.454 | 7.78 | 0.505 | 0.772 | -0.564 | -- | -- | 0.379 | 5.06 | 26.4 | 1318 | -- | -- |
| 112.23 | 0.493 | 7.62 | 1.96 | -- | -1.36 | -- | 6.55 | 0.709 | -- | 26.33 | 1831 | -- | -- |
| 102.4 | 0.474 | 7.79 | 0.325 | 0.727 | -- | -1.61 | -- | 0.349 | 5.44 | -- | -- | -- | -- |
| 108.84 | 0.489 | 7.79 | 0.32 | 0.717 | -- | -- | -- | 0.356 | 5.39 | -- | -- | -- | -- |
| 121.52 | 0.513 | 7.77 | 0.527 | -- | -0.578 | -- | -- | 0.457 | -- | 26.31 | 6289 | -- | -- |
| 101.29 | 0.469 | 7.8 | -- | 0.767 | -0.461 | -- | -- | 0.316 | 5.07 | 27.02 | 1293 | -- | -- |
| 135.6 | 0.544 | 7.8 | 0.345 | -- | -- | -- | -- | 0.373 | -- | -- | -- | -- | -- |
| 111.55 | 0.494 | 7.79 | -- | 0.722 | -- | -- | -- | 0.32 | 5.37 | -- | -- | -- | -- |
| 128.87 | 0.529 | 7.8 | -- | -- | -0.468 | -- | -- | 0.366 | -- | 27.08 | 6291 | -- | -- |
| 138.73 | 0.55 | 7.8 | -- | -- | -- | -- | -- | 0.335 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.87 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 47 | 85.17 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 14 |
| 70 | 85.48 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 16 | NA |
| 75 | 85.53 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 91 | 85.68 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 12 | 5 |
| 136 | 86.15 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 138 | 86.16 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 140 | 86.17 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 9 | 6 |
| 142 | 86.17 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 3 | 16 |
| 143 | 86.18 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 2 | 19 |
| 158 | 86.26 | wind | 5.0 | 43200 | > th | dose independent | rect. | 11 | 5 |
| 172 | 86.29 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 183 | 86.32 | temperature | 15.0 | 14400 | < th | dose dependent | sin | 2 | NA |
| 191 | 86.35 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 201 | 86.38 | wind | 7.0 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 203 | 86.39 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 205 | 86.40 | wind | 5.0 | 43200 | < th | dose independent | rect. | 11 | 5 |
| 217 | 86.43 | wind | 5.0 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 220 | 86.44 | wind | 7.0 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 221 | 86.44 | wind | 5.0 | 43200 | < th | dose independent | rect. | 10 | 7 |
| 229 | 86.45 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 245 | 86.51 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 251 | 86.53 | temperature | 15.0 | 14400 | < th | dose dependent | sin | 17 | NA |
| 264 | 86.56 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 14 |
| 279 | 86.58 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 7 | 19 |
| 303 | 86.62 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 307 | 86.62 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 320 | 86.63 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 322 | 86.64 | temperature | 15.0 | 14400 | < th | dose dependent | no | NA | NA |
| 329 | 86.65 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 16 | 9 |
| 349 | 86.67 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 19 | 5 |
| 356 | 86.67 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 15 | 23 |
| 363 | 86.68 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 11 | 15 |
| 520 | 86.82 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 527 | 86.83 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 528 | 86.83 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 562 | 86.87 | radiation | 1.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 599 | 86.91 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 608 | 86.92 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 636 | 86.96 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 10 |
| 641 | 86.97 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 642 | 86.97 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 3 |
| 666 | 87.00 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 676 | 87.02 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 687 | 87.03 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 2 | 10 |
| 696 | 87.04 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 737 | 87.08 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 746 | 87.09 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 822 | 87.17 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 824 | 87.17 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 828 | 87.18 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 842 | 87.22 | wind | 7.0 | 43200 | < th | dose independent | rect. | 7 | 10 |
| 853 | 87.23 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 17 | 14 |
| 869 | 87.25 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 874 | 87.26 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 9 |
| 879 | 87.26 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 890 | 87.29 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 918 | 87.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 921 | 87.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 9 |
| 976 | 87.36 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 15 | 12 |
| 1000 | 87.38 | radiation | 40.0 | 43200 | > th | dose dependent | sin | 10 | NA |