Os02g0106700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1671 family protein.
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Os02g0106700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1671 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.93 | 0.441 | 7.95 | -0.274 | 0.248 | 1.3 | -0.179 | 0.153 | 0.149 | 0.315 | 21.4 | 1241 | -- | -- |
| 87.91 | 0.437 | 7.95 | -0.302 | 0.23 | 1.28 | -0.156 | -- | 0.142 | 0.421 | 21.45 | 1194 | -- | -- |
| 88.01 | 0.437 | 7.95 | -0.288 | 0.23 | 1.28 | -- | 0.0392 | 0.145 | 0.527 | 21.43 | 1194 | -- | -- |
| 87.87 | 0.437 | 7.95 | -0.293 | 0.204 | 1.28 | -- | -- | 0.152 | 0.849 | 21.3 | 1110 | -- | -- |
| 90.1 | 0.442 | 7.95 | -0.325 | -- | 1.29 | -- | -0.135 | 0.144 | -- | 21.37 | 1014 | -- | -- |
| 138.4 | 0.552 | 7.87 | 0.199 | 0.352 | -- | -0.266 | -- | 0.507 | 0.554 | -- | -- | -- | -- |
| 138.7 | 0.552 | 7.87 | 0.209 | 0.353 | -- | -- | -- | 0.509 | 0.577 | -- | -- | -- | -- |
| 90.15 | 0.442 | 7.95 | -0.292 | -- | 1.3 | -- | -- | 0.151 | -- | 21.35 | 1018 | -- | -- |
| 89.94 | 0.442 | 7.94 | -- | 0.199 | 1.2 | -- | -- | 0.192 | 1.23 | 21.3 | 1081 | -- | -- |
| 146.5 | 0.566 | 7.86 | 0.222 | -- | -- | -- | -- | 0.515 | -- | -- | -- | -- | -- |
| 139.86 | 0.553 | 7.87 | -- | 0.356 | -- | -- | -- | 0.485 | 0.606 | -- | -- | -- | -- |
| 90.61 | 0.443 | 7.94 | -- | -- | 1.14 | -- | -- | 0.163 | -- | 22.07 | 1037 | -- | -- |
| 147.79 | 0.567 | 7.87 | -- | -- | -- | -- | -- | 0.49 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 2 | 87.61 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 4 |
| 27 | 88.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 41 | 89.27 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 113 | 90.44 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 194 | 91.22 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 197 | 91.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 200 | 91.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 234 | 91.55 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 10 |
| 254 | 91.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 297 | 91.94 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 308 | 91.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 373 | 92.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 397 | 92.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 410 | 92.47 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 416 | 92.49 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 484 | 92.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 513 | 92.88 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 517 | 92.89 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 533 | 92.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 5 |
| 573 | 93.05 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 600 | 93.15 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 767 | 93.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 803 | 93.79 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 817 | 93.83 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 849 | 93.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 869 | 94.00 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |