Os02g0104800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0104800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.77 | 0.214 | 11.8 | -0.25 | 0.244 | -0.617 | -0.0702 | -0.335 | 0.0867 | 13 | 15.08 | 485 | -- | -- |
| 20.86 | 0.213 | 11.8 | -0.2 | 0.241 | -0.619 | -0.0731 | -- | 0.0989 | 12.9 | 14.92 | 488 | -- | -- |
| 20.79 | 0.212 | 11.8 | -0.252 | 0.249 | -0.617 | -- | -0.328 | 0.0872 | 13 | 15.2 | 475 | -- | -- |
| 20.87 | 0.213 | 11.8 | -0.194 | 0.249 | -0.62 | -- | -- | 0.104 | 13 | 15.4 | 473 | -- | -- |
| 22.87 | 0.223 | 11.8 | -0.198 | -- | -0.66 | -- | -0.22 | 0.106 | -- | 15.51 | 767 | -- | -- |
| 25.56 | 0.237 | 11.9 | -0.34 | 0.282 | -- | -0.000126 | -- | 0.00646 | 10.5 | -- | -- | -- | -- |
| 25.56 | 0.237 | 11.9 | -0.34 | 0.282 | -- | -- | -- | 0.00646 | 10.5 | -- | -- | -- | -- |
| 22.93 | 0.223 | 11.8 | -0.169 | -- | -0.669 | -- | -- | 0.11 | -- | 15.48 | 765 | -- | -- |
| 21.79 | 0.217 | 11.8 | -- | 0.234 | -0.687 | -- | -- | 0.135 | 13.4 | 15.53 | 516 | -- | -- |
| 30.43 | 0.258 | 11.9 | -0.345 | -- | -- | -- | -- | 0.00533 | -- | -- | -- | -- | -- |
| 28.62 | 0.25 | 11.8 | -- | 0.284 | -- | -- | -- | 0.0444 | 10.6 | -- | -- | -- | -- |
| 23.6 | 0.226 | 11.8 | -- | -- | -0.743 | -- | -- | 0.138 | -- | 14.97 | 780 | -- | -- |
| 33.58 | 0.27 | 11.9 | -- | -- | -- | -- | -- | 0.0436 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 17 |
| 14 | 18.84 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 18 |
| 61 | 19.46 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 66 | 19.50 | temperature | 30 | 270 | < th | dose independent | rect. | 8 | 15 |
| 72 | 19.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 139 | 19.90 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 146 | 19.93 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 150 | 19.95 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 154 | 19.97 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 17 |
| 207 | 20.11 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 262 | 20.21 | temperature | 30 | 270 | < th | dose independent | rect. | 5 | 20 |
| 265 | 20.21 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 15 |
| 272 | 20.23 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 278 | 20.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 313 | 20.32 | humidity | 50 | 270 | > th | dose independent | rect. | 8 | 15 |
| 326 | 20.34 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 10 |
| 457 | 20.53 | humidity | 60 | 270 | > th | dose independent | rect. | 16 | 9 |
| 469 | 20.54 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 22 |
| 523 | 20.60 | temperature | 30 | 270 | > th | dose independent | rect. | 12 | 21 |
| 530 | 20.61 | temperature | 30 | 270 | > th | dose independent | sin | 17 | NA |
| 531 | 20.61 | temperature | 30 | 270 | < th | dose independent | sin | 17 | NA |
| 555 | 20.63 | temperature | 30 | 270 | > th | dose independent | rect. | 13 | 6 |
| 589 | 20.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 8 |
| 656 | 20.70 | temperature | 30 | 270 | > th | dose independent | rect. | 15 | 1 |
| 665 | 20.71 | temperature | 30 | 90 | > th | dose independent | sin | 14 | NA |
| 666 | 20.71 | temperature | 30 | 90 | < th | dose independent | sin | 14 | NA |
| 667 | 20.71 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 6 |
| 752 | 20.77 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 18 |
| 795 | 20.80 | temperature | 30 | 270 | > th | dose independent | rect. | 14 | 3 |
| 803 | 20.80 | temperature | 10 | 270 | > th | dose dependent | rect. | 13 | 16 |
| 834 | 20.82 | temperature | 30 | 270 | > th | dose dependent | rect. | 14 | 22 |
| 852 | 20.84 | temperature | 30 | 270 | > th | dose dependent | sin | 16 | NA |
| 984 | 20.92 | humidity | 70 | 270 | < th | dose dependent | rect. | 13 | 6 |