Os01g0976300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os01g0976300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129 | 0.534 | 5.73 | 0.367 | 1.23 | 1.36 | -0.641 | -0.269 | 0.472 | 9.03 | 1010 | 11 | -- | -- |
| 129.06 | 0.529 | 5.74 | 0.357 | 1.23 | 1.38 | -0.636 | -- | 0.47 | 9.03 | 1010 | 11 | -- | -- |
| 130.42 | 0.532 | 5.73 | 0.345 | 1.24 | 1.39 | -- | -0.196 | 0.472 | 9.03 | 1010 | 11 | -- | -- |
| 130.45 | 0.532 | 5.74 | 0.336 | 1.24 | 1.41 | -- | -- | 0.469 | 9.04 | 1010 | 10 | -- | -- |
| 206.18 | 0.669 | 5.82 | 0.351 | -- | 1.19 | -- | -0.34 | 0.223 | -- | 1005 | 284 | -- | -- |
| 141.37 | 0.557 | 5.75 | 0.309 | 1.23 | -- | -0.696 | -- | 0.422 | 9.01 | -- | -- | -- | -- |
| 143.04 | 0.56 | 5.75 | 0.285 | 1.23 | -- | -- | -- | 0.422 | 9.02 | -- | -- | -- | -- |
| 206.33 | 0.669 | 5.83 | 0.34 | -- | 1.2 | -- | -- | 0.22 | -- | 1005 | 286 | -- | -- |
| 133.41 | 0.538 | 5.74 | -- | 1.24 | 1.36 | -- | -- | 0.434 | 9.02 | 1010 | 11 | -- | -- |
| 230.04 | 0.709 | 5.78 | 0.283 | -- | -- | -- | -- | 0.429 | -- | -- | -- | -- | -- |
| 145.18 | 0.564 | 5.75 | -- | 1.23 | -- | -- | -- | 0.39 | 9 | -- | -- | -- | -- |
| 209.34 | 0.674 | 5.83 | -- | -- | 1.17 | -- | -- | 0.186 | -- | 1005 | 281 | -- | -- |
| 232.15 | 0.711 | 5.79 | -- | -- | -- | -- | -- | 0.398 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.62 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 14 | 10 |
| 4 | 120.88 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 13 | 3 |
| 9 | 121.87 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 9 | 19 |
| 10 | 122.18 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 15 | 11 |
| 36 | 123.25 | atmosphere | 1015 | 720 | < th | dose dependent | rect. | 9 | 11 |
| 37 | 123.27 | atmosphere | 1015 | 720 | < th | dose dependent | rect. | 8 | 13 |
| 50 | 123.63 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 3 | 21 |
| 54 | 123.69 | radiation | 40 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 58 | 123.88 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 18 | 8 |
| 60 | 124.01 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 5 | 20 |
| 102 | 124.44 | atmosphere | 1000 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 106 | 124.47 | atmosphere | 1000 | 720 | > th | dose dependent | rect. | 9 | 16 |
| 113 | 124.58 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 115 | 124.61 | atmosphere | 1000 | 720 | > th | dose dependent | rect. | 11 | 14 |
| 121 | 124.69 | atmosphere | 1015 | 720 | < th | dose dependent | rect. | 16 | 4 |
| 127 | 124.74 | wind | 7 | 90 | < th | dose independent | rect. | 1 | 13 |
| 152 | 124.94 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 22 | 14 |
| 160 | 124.99 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 11 | 5 |
| 172 | 125.08 | atmosphere | 1000 | 720 | > th | dose dependent | sin | 20 | NA |
| 175 | 125.10 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 299 | 125.76 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 16 | 21 |
| 314 | 125.85 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 16 | 12 |
| 331 | 125.91 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 348 | 126.00 | atmosphere | 1015 | 720 | < th | dose dependent | sin | 20 | NA |
| 380 | 126.12 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 14 | 10 |
| 442 | 126.39 | radiation | 40 | 4320 | > th | dose dependent | sin | 11 | NA |
| 448 | 126.41 | wind | 3 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 458 | 126.44 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 9 | 19 |
| 477 | 126.49 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 14 | 19 |
| 479 | 126.50 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 11 | 15 |
| 539 | 126.70 | radiation | 40 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 540 | 126.70 | atmosphere | 1015 | 720 | < th | dose dependent | rect. | 10 | 3 |
| 593 | 126.82 | wind | 3 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 617 | 126.89 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 22 | 3 |
| 626 | 126.93 | wind | 3 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 662 | 127.02 | wind | 5 | 90 | < th | dose independent | rect. | 15 | 10 |
| 697 | 127.12 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 17 | 2 |
| 784 | 127.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 6 |
| 804 | 127.31 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 3 | 21 |
| 873 | 127.41 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 20 | 5 |
| 915 | 127.53 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 19 | 11 |
| 933 | 127.58 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 942 | 127.61 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 16 | 13 |
| 989 | 127.68 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 17 | 11 |
| 996 | 127.71 | atmosphere | 1010 | 90 | < th | dose independent | rect. | 12 | 17 |