Os01g0973400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein 48 family protein.
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Os01g0973400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein 48 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.98 | 0.266 | 13.1 | 0.495 | 1.35 | 0.546 | 0.285 | -0.393 | -0.165 | 21.7 | 19.92 | 300 | -- | -- |
| 32.3 | 0.265 | 13.1 | 0.473 | 1.36 | 0.667 | 0.32 | -- | -0.175 | 21.6 | 19.6 | 300 | -- | -- |
| 32.28 | 0.265 | 13.1 | 0.486 | 1.35 | 0.539 | -- | -0.411 | -0.166 | 21.6 | 19.96 | 302 | -- | -- |
| 32.69 | 0.266 | 13.1 | 0.455 | 1.36 | 0.659 | -- | -- | -0.178 | 21.6 | 19.6 | 302 | -- | -- |
| 129.11 | 0.529 | 13 | 0.426 | -- | 0.663 | -- | -0.156 | -0.141 | -- | 20.8 | 9 | -- | -- |
| 42.63 | 0.306 | 13.1 | 0.241 | 1.35 | -- | 0.202 | -- | -0.282 | 21.9 | -- | -- | -- | -- |
| 42.79 | 0.306 | 13.1 | 0.233 | 1.35 | -- | -- | -- | -0.283 | 21.9 | -- | -- | -- | -- |
| 127.58 | 0.526 | 13 | 0.43 | -- | 0.631 | -- | -- | -0.118 | -- | 21.79 | 10 | -- | -- |
| 37.09 | 0.284 | 13.1 | -- | 1.36 | 0.464 | -- | -- | -0.24 | 21.6 | 20.2 | 285 | -- | -- |
| 151.4 | 0.575 | 13.1 | 0.248 | -- | -- | -- | -- | -0.283 | -- | -- | -- | -- | -- |
| 44.23 | 0.311 | 13.1 | -- | 1.35 | -- | -- | -- | -0.309 | 21.9 | -- | -- | -- | -- |
| 131.47 | 0.534 | 13.1 | -- | -- | 0.583 | -- | -- | -0.162 | -- | 22.1 | 10 | -- | -- |
| 153.02 | 0.577 | 13.1 | -- | -- | -- | -- | -- | -0.311 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.59 | temperature | 20.0 | 270 | > th | dose independent | sin | 6 | NA |
| 2 | 29.76 | temperature | 20.0 | 270 | < th | dose independent | sin | 6 | NA |
| 5 | 29.85 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 18 |
| 18 | 30.17 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 13 |
| 39 | 30.72 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 22 |
| 51 | 30.97 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 15 |
| 65 | 31.09 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 91 | 31.50 | temperature | 20.0 | 270 | > th | dose independent | rect. | 16 | 23 |
| 98 | 31.56 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 23 |
| 144 | 32.00 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 8 |
| 150 | 32.02 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 10 |
| 160 | 32.09 | temperature | 20.0 | 270 | < th | dose independent | rect. | 14 | 23 |
| 161 | 32.09 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 162 | 32.10 | temperature | 20.0 | 270 | < th | dose independent | no | NA | NA |
| 167 | 32.11 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |
| 236 | 32.51 | temperature | 25.0 | 90 | < th | dose dependent | sin | 5 | NA |
| 249 | 32.61 | temperature | 20.0 | 270 | < th | dose independent | rect. | 8 | 23 |
| 303 | 32.92 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 23 |
| 310 | 32.96 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 325 | 33.02 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 328 | 33.02 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 357 | 33.15 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 359 | 33.15 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 19 |
| 365 | 33.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 367 | 33.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 398 | 33.26 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 407 | 33.28 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 21 |
| 423 | 33.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 425 | 33.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 437 | 33.33 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 446 | 33.33 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 450 | 33.34 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 21 |
| 453 | 33.34 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 478 | 33.38 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 18 |
| 485 | 33.39 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 486 | 33.39 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 514 | 33.41 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 7 | 8 |
| 520 | 33.42 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 583 | 33.47 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 596 | 33.47 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 19 |
| 599 | 33.48 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 8 | 7 |
| 600 | 33.48 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 612 | 33.49 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 616 | 33.49 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 624 | 33.50 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 635 | 33.50 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 647 | 33.51 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 705 | 33.54 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 721 | 33.54 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 722 | 33.54 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 23 |
| 733 | 33.55 | humidity | 90.0 | 14400 | > th | dose independent | sin | 0 | NA |
| 795 | 33.58 | humidity | 90.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 802 | 33.58 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 12 |
| 835 | 33.60 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 849 | 33.60 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 859 | 33.61 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 908 | 33.63 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 17 |
| 923 | 33.64 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 987 | 33.66 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |