Os01g0970400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit).
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Os01g0970400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.59 | 0.26 | 11.9 | -0.979 | 0.55 | 0.82 | 0.29 | -2.2 | -0.291 | 15 | 25.47 | 1533 | -- | -- |
| 32.13 | 0.264 | 11.8 | -0.391 | 0.528 | 0.649 | 0.29 | -- | -0.144 | 15 | 25.8 | 1652 | -- | -- |
| 30.85 | 0.259 | 11.9 | -1.01 | 0.549 | 0.837 | -- | -2.37 | -0.296 | 15 | 25.58 | 1542 | -- | -- |
| 32.39 | 0.265 | 11.8 | -0.387 | 0.541 | 0.636 | -- | -- | -0.136 | 15 | 25.83 | 1650 | -- | -- |
| 32 | 0.263 | 11.8 | -0.62 | -- | 1.17 | -- | -1.44 | -0.309 | -- | 23.16 | 95 | -- | -- |
| 46.43 | 0.319 | 11.8 | -0.187 | 0.543 | -- | 0.215 | -- | -0.0883 | 15.2 | -- | -- | -- | -- |
| 46.58 | 0.32 | 11.8 | -0.182 | 0.544 | -- | -- | -- | -0.0869 | 15.2 | -- | -- | -- | -- |
| 33.29 | 0.269 | 11.8 | -0.401 | -- | 1.07 | -- | -- | -0.249 | -- | 23.05 | 90 | -- | -- |
| 35.85 | 0.279 | 11.8 | -- | 0.526 | 0.567 | -- | -- | -0.0803 | 14.9 | 26.4 | 1765 | -- | -- |
| 63.39 | 0.372 | 11.8 | -0.206 | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
| 47.46 | 0.322 | 11.8 | -- | 0.548 | -- | -- | -- | -0.0666 | 15.2 | -- | -- | -- | -- |
| 37.31 | 0.284 | 11.8 | -- | -- | 0.996 | -- | -- | -0.188 | -- | 23.37 | 91 | -- | -- |
| 64.51 | 0.375 | 11.8 | -- | -- | -- | -- | -- | -0.0784 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.19 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 28.54 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 4 | 28.70 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 5 | 28.91 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 6 | 28.91 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 8 | 29.05 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 9 | 29.32 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 11 | 29.38 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 17 | 29.83 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 18 | 29.84 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 19 | 29.90 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 24 | 22 |
| 20 | 29.91 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 24 | 30.03 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 28 | 30.16 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 34 | 30.29 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 41 | 30.34 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 46 | 30.41 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 49 | 30.43 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 64 | 30.58 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 9 | 10 |
| 66 | 30.58 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 7 | 12 |
| 82 | 30.60 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 109 | 30.68 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 21 | NA |
| 122 | 30.70 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 140 | 30.74 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 143 | 30.75 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 153 | 30.77 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 177 | 30.82 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 196 | 30.86 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 218 | 30.89 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 228 | 30.90 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 241 | 30.92 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 22 | 7 |
| 260 | 30.93 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 14 | 23 |
| 261 | 30.94 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 272 | 30.94 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 289 | 30.96 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 11 |
| 301 | 30.98 | wind | 9.0 | 43200 | > th | dose dependent | sin | 14 | NA |
| 303 | 30.98 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 313 | 30.99 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 4 | 13 |
| 324 | 31.01 | temperature | 20.0 | 270 | > th | dose dependent | no | NA | NA |
| 333 | 31.02 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 334 | 31.02 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 379 | 31.08 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 386 | 31.10 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 417 | 31.14 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 445 | 31.17 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 3 | 19 |
| 449 | 31.18 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 460 | 31.19 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 502 | 31.23 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 511 | 31.24 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 18 |
| 516 | 31.25 | wind | 3.0 | 43200 | > th | dose dependent | sin | 1 | NA |
| 551 | 31.29 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 555 | 31.29 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 13 |
| 566 | 31.30 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 10 |
| 577 | 31.31 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 580 | 31.32 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 588 | 31.33 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 605 | 31.35 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 619 | 31.36 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 621 | 31.36 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 21 | 10 |
| 631 | 31.36 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 13 | 18 |
| 639 | 31.37 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 646 | 31.37 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 660 | 31.39 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 680 | 31.41 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 697 | 31.41 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 22 |
| 723 | 31.44 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 735 | 31.44 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 8 | 13 |
| 744 | 31.45 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 781 | 31.47 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 13 | 23 |
| 857 | 31.51 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 863 | 31.52 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 879 | 31.53 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 881 | 31.53 | wind | 3.0 | 43200 | > th | dose dependent | no | NA | NA |
| 890 | 31.53 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 911 | 31.55 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 927 | 31.56 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 11 | 23 |
| 979 | 31.60 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 989 | 31.60 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 23 |