Os01g0967900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aspartyl aminopeptidase.
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Os01g0967900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Aspartyl aminopeptidase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.35 | 0.259 | 10 | -0.327 | 0.737 | -0.534 | 0.116 | 0.625 | -0.139 | 22.1 | 21.2 | 925 | -- | -- |
| 31.99 | 0.263 | 10 | -0.373 | 0.724 | -0.529 | 0.16 | -- | -0.146 | 22 | 21.21 | 958 | -- | -- |
| 30.39 | 0.257 | 10 | -0.321 | 0.741 | -0.533 | -- | 0.665 | -0.136 | 22.1 | 21.22 | 900 | -- | -- |
| 31.64 | 0.262 | 10 | -0.485 | 0.748 | -0.578 | -- | -- | -0.174 | 22.1 | 21.3 | 904 | -- | -- |
| 56.06 | 0.351 | 10 | -0.568 | -- | -0.421 | -- | 0.0427 | -0.204 | -- | 22.2 | 1501 | -- | -- |
| 41.93 | 0.304 | 10.1 | -0.695 | 0.649 | -- | 0.324 | -- | -0.328 | 22 | -- | -- | -- | -- |
| 42.34 | 0.305 | 10.1 | -0.707 | 0.649 | -- | -- | -- | -0.328 | 22 | -- | -- | -- | -- |
| 56.07 | 0.35 | 10 | -0.58 | -- | -0.421 | -- | -- | -0.206 | -- | 22.2 | 1501 | -- | -- |
| 36.52 | 0.281 | 10 | -- | 0.774 | -0.779 | -- | -- | -0.103 | 22 | 20.5 | 929 | -- | -- |
| 67.65 | 0.384 | 10.1 | -0.699 | -- | -- | -- | -- | -0.328 | -- | -- | -- | -- | -- |
| 55.52 | 0.349 | 10.1 | -- | 0.647 | -- | -- | -- | -0.25 | 21.9 | -- | -- | -- | -- |
| 59.47 | 0.359 | 10 | -- | -- | -0.848 | -- | -- | -0.126 | -- | 12.39 | 27719 | -- | -- |
| 80.56 | 0.419 | 10 | -- | -- | -- | -- | -- | -0.25 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.38 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 3 | 29.50 | temperature | 20 | 720 | > th | dose dependent | sin | 10 | NA |
| 5 | 29.62 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 10 | 29.78 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 16 |
| 19 | 29.91 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 14 |
| 21 | 29.95 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 12 |
| 24 | 29.97 | temperature | 20 | 720 | > th | dose independent | sin | 11 | NA |
| 48 | 30.09 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 57 | 30.14 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 73 | 30.27 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 78 | 30.31 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 87 | 30.35 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 99 | 30.41 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 126 | 30.50 | wind | 1 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 131 | 30.51 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 132 | 30.51 | wind | 9 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 142 | 30.55 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 149 | 30.57 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 158 | 30.59 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 202 | 30.70 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 21 |
| 256 | 30.81 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 265 | 30.82 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 19 |
| 277 | 30.84 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 333 | 30.91 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 342 | 30.91 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 16 |
| 344 | 30.91 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 345 | 30.91 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 375 | 30.95 | temperature | 20 | 720 | < th | dose independent | rect. | 10 | 22 |
| 377 | 30.95 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 415 | 30.99 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 416 | 30.99 | temperature | 20 | 720 | < th | dose independent | sin | 10 | NA |
| 417 | 30.99 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 491 | 31.05 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 23 |
| 520 | 31.08 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 578 | 31.15 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 594 | 31.17 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 599 | 31.17 | wind | 1 | 43200 | > th | dose dependent | rect. | 10 | 11 |
| 612 | 31.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 631 | 31.19 | wind | 7 | 43200 | < th | dose dependent | rect. | 11 | 11 |
| 639 | 31.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 646 | 31.21 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 664 | 31.22 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 8 |
| 696 | 31.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 704 | 31.25 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 707 | 31.25 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 9 |
| 747 | 31.27 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 23 |
| 762 | 31.28 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 780 | 31.29 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 23 |
| 838 | 31.31 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 858 | 31.33 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 859 | 31.33 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 861 | 31.33 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 865 | 31.33 | humidity | 80 | 43200 | < th | dose dependent | sin | 9 | NA |
| 866 | 31.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 867 | 31.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 5 |
| 885 | 31.34 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 10 |
| 887 | 31.34 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 23 |
| 929 | 31.36 | wind | 5 | 43200 | < th | dose dependent | rect. | 19 | 2 |