BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0967900 Os01g0967900|AK058521
         (525 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G04710.1  | chr5:1357273-1360128 REVERSE LENGTH=527            731   0.0  
AT5G60160.1  | chr5:24223887-24226783 REVERSE LENGTH=478          578   e-165

>AT5G04710.1 | chr5:1357273-1360128 REVERSE LENGTH=527
          Length = 526

 Score =  731 bits (1888), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/462 (74%), Positives = 391/462 (84%), Gaps = 2/462 (0%)

Query: 64  IVADLLDYLNESWTQFHATAEAKRQLLDAGFTLLSENDDWDLQPGGRYFFTRNMSCLIAF 123
           IV DLLDYLNESWTQFHATAEAKRQLL AGF LLSEN+DW+L+PGGRYFFTRNMSCL+AF
Sbjct: 66  IVGDLLDYLNESWTQFHATAEAKRQLLAAGFDLLSENEDWNLKPGGRYFFTRNMSCLVAF 125

Query: 124 AVGEKYKLGNGFNIIAAHTDSPCLKLKPRSASFKSGHQMVNVQTYGGGLWHTWFDRDLTL 183
           AVGEKY  GNGF+ IAAHTDSPCLKLKP+SAS KSG+ MVNVQTYGGGLWHTWFDRDL++
Sbjct: 126 AVGEKYVPGNGFHAIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLSV 185

Query: 184 AGRVILKDADGSFKHELVKVSRPLIRVPTLAIHLDRTVNSDGFKPNLENHLVPLLATKHX 243
           AGR I++ +DGSF H LVKV RPL+RVPTLAIHLDRTVNSDGFKPNLE  LVPLLATK  
Sbjct: 186 AGRAIVRASDGSFVHRLVKVKRPLLRVPTLAIHLDRTVNSDGFKPNLETQLVPLLATKSD 245

Query: 244 XXXXXXXXXXXXXXXXVVHHPLLLQVLSDEIGCKSGEIIGIELNVCDTQPSCLGGGNNEF 303
                             HHPLL+Q+LSD++ CK  +I+ +ELN+CDTQPSCLGG NNEF
Sbjct: 246 ESSAESKDKNVSSKD--AHHPLLMQILSDDLDCKVEDIVSLELNICDTQPSCLGGANNEF 303

Query: 304 IYSGRLDNLASCYCALRSLMDSSKMPEELSNEKAIRMIALFDNEEVGSNSMQGAGAPTMF 363
           I+SGRLDNLAS +CALR+L+DS +  E LS E  IRMIALFDNEEVGS+S QGAGAPTMF
Sbjct: 304 IFSGRLDNLASSFCALRALIDSCESSENLSTEHDIRMIALFDNEEVGSDSCQGAGAPTMF 363

Query: 364 HAMRRIVDSLMHQSMGEGALERAINSSFLVSADMAHALHPNYPDKHEEHHRPELQKGLVI 423
            AMRRIV SL ++ + E   +RAI  SFLVSADMAH +HPN+ DKHEE+HRP+L KGLVI
Sbjct: 364 QAMRRIVSSLGNKQVTECTFDRAIRKSFLVSADMAHGVHPNFADKHEENHRPQLHKGLVI 423

Query: 424 KHNANQRYATSAVTAFLFKEIARLHNLPVQEFVVRNDMGCGSTIGPILASGVGIRTVDCG 483
           KHNANQRYATS +T+FLFKE+A+LH+LP+QEFVVRNDMGCGSTIGPILASGVGIRTVDCG
Sbjct: 424 KHNANQRYATSGITSFLFKEVAKLHDLPIQEFVVRNDMGCGSTIGPILASGVGIRTVDCG 483

Query: 484 IPQLSMHSVREMCGKEDVDTTYKHFKAFFEMFSDIDRKLNVD 525
           I QLSMHSVRE+CG +D+D  Y+HFKAF+  FS +D+KL VD
Sbjct: 484 IAQLSMHSVREICGTDDIDIAYRHFKAFYRSFSSVDKKLVVD 525



>AT5G60160.1 | chr5:24223887-24226783 REVERSE LENGTH=478
          Length = 477

 Score =  578 bits (1489), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 276/474 (58%), Positives = 342/474 (72%), Gaps = 15/474 (3%)

Query: 64  IVADLLDYLNESWTQFHATAEAKRQLLDAGFTLLSENDDWDLQPGGRYFFTRNMSCLIAF 123
           +V+D L +LN S T FHA  E+KR+LL AG+  +SE DDW L+ G +YFFTRN S ++AF
Sbjct: 6   LVSDFLSFLNASPTAFHAVDESKRRLLKAGYEQISERDDWKLEAGKKYFFTRNYSTIVAF 65

Query: 124 AVGEKYKLGNGFNIIAAHTDSPCLKLKPRSASFKSGHQMVNVQTYGGGLWHTWFDRDLTL 183
           A+G KY  GNGF+II AHTDSPCLKLKP S   K G   V VQTYGGGLW+TWFDRDLT+
Sbjct: 66  AIGHKYVAGNGFHIIGAHTDSPCLKLKPVSKITKGGCLEVGVQTYGGGLWYTWFDRDLTV 125

Query: 184 AGRVILKDADG---SFKHELVKVSRPLIRVPTLAIHLDRTVNSDGFKPNLENHLVPLLAT 240
           AGRVILK+      S+ H LV++  P++R+PTLAIHLDR VN++GFKPN + HLVP+LAT
Sbjct: 126 AGRVILKEEKAGSVSYSHRLVRIEDPIMRIPTLAIHLDRNVNTEGFKPNTQTHLVPVLAT 185

Query: 241 KHXXXXXXXXXXX---------XXXXXXVVHHPLLLQVLSDEIGCKSGEIIGIELNVCDT 291
                                         HHPLL++++++ +GCK  EI   EL  CDT
Sbjct: 186 AIKAELNKTPAESGEHDEGKKCAETSSKSKHHPLLMEIIANALGCKPEEICDFELQACDT 245

Query: 292 QPSCLGGGNNEFIYSGRLDNLASCYCALRSLMDSSKMPEELSNEKAIRMIALFDNEEVGS 351
           QPS L G   EFI+SGRLDNL   +C+L++L+D++    +L +E  IRM+ALFD+EEVGS
Sbjct: 246 QPSILAGAAKEFIFSGRLDNLCMSFCSLKALIDATSSGSDLEDESGIRMVALFDHEEVGS 305

Query: 352 NSMQGAGAPTMFHAMRRIVDSLMHQSMGEGALERAINSSFLVSADMAHALHPNYPDKHEE 411
           NS QGAG+P M  AM  I       S     L++AI  S LVSADMAHALHPN+ DKHEE
Sbjct: 306 NSAQGAGSPVMIDAMSHITSCF---SSDTKVLKKAIQKSLLVSADMAHALHPNFMDKHEE 362

Query: 412 HHRPELQKGLVIKHNANQRYATSAVTAFLFKEIARLHNLPVQEFVVRNDMGCGSTIGPIL 471
           +H+P++  GLVIKHNANQRYAT+AVT+F+F+EIA  HNLPVQ+FVVRNDMGCGSTIGPIL
Sbjct: 363 NHQPKMHGGLVIKHNANQRYATNAVTSFVFREIAEKHNLPVQDFVVRNDMGCGSTIGPIL 422

Query: 472 ASGVGIRTVDCGIPQLSMHSVREMCGKEDVDTTYKHFKAFFEMFSDIDRKLNVD 525
           AS VGIRTVD G PQLSMHS+REMC  +DV  +Y+HFKAFF+ F+ +D KL +D
Sbjct: 423 ASSVGIRTVDVGAPQLSMHSIREMCAADDVKHSYEHFKAFFQEFTHLDAKLTID 476



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.136    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,044,618
Number of extensions: 415959
Number of successful extensions: 875
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 872
Number of HSP's successfully gapped: 3
Length of query: 525
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 422
Effective length of database: 8,282,721
Effective search space: 3495308262
Effective search space used: 3495308262
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)