Os01g0958800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0958800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.84 | 0.269 | 9.52 | -1.5 | 0.599 | -0.953 | 0.219 | 0.183 | -0.212 | 3.16 | 23 | 275 | -- | -- |
| 32.87 | 0.267 | 9.52 | -1.48 | 0.601 | -0.98 | 0.264 | -- | -0.206 | 3.14 | 22.96 | 271 | -- | -- |
| 32.98 | 0.267 | 9.52 | -1.51 | 0.595 | -0.929 | -- | 0.284 | -0.212 | 3.13 | 23 | 274 | -- | -- |
| 33.07 | 0.268 | 9.52 | -1.49 | 0.608 | -0.991 | -- | -- | -0.209 | 3.09 | 22.92 | 251 | -- | -- |
| 46.79 | 0.319 | 9.54 | -1.59 | -- | -0.996 | -- | 0.299 | -0.237 | -- | 23.08 | 1154 | -- | -- |
| 43.96 | 0.311 | 9.49 | -1.26 | 0.513 | -- | 0.291 | -- | -0.0724 | 3.13 | -- | -- | -- | -- |
| 44.24 | 0.311 | 9.49 | -1.26 | 0.513 | -- | -- | -- | -0.0741 | 3.08 | -- | -- | -- | -- |
| 46.8 | 0.319 | 9.53 | -1.52 | -- | -0.895 | -- | -- | -0.227 | -- | 25.41 | 1113 | -- | -- |
| 84.66 | 0.431 | 9.47 | -- | 0.529 | -0.343 | -- | -- | 0.0322 | 2.88 | 22.66 | 23 | -- | -- |
| 59.29 | 0.36 | 9.49 | -1.24 | -- | -- | -- | -- | -0.0607 | -- | -- | -- | -- | -- |
| 86.15 | 0.434 | 9.46 | -- | 0.488 | -- | -- | -- | 0.0664 | 3.07 | -- | -- | -- | -- |
| 96.49 | 0.458 | 9.45 | -- | -- | 0.469 | -- | -- | 0.13 | -- | 36.31 | 21 | -- | -- |
| 99.8 | 0.466 | 9.46 | -- | -- | -- | -- | -- | 0.0768 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.82 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 21 |
| 12 | 33.47 | temperature | 25 | 270 | < th | dose dependent | rect. | 16 | 21 |
| 25 | 33.55 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 42 | 33.67 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 47 | 33.74 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 85 | 34.11 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 95 | 34.17 | temperature | 25 | 90 | < th | dose dependent | rect. | 22 | 23 |
| 96 | 34.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 3 |
| 99 | 34.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 107 | 34.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 16 |
| 110 | 34.30 | temperature | 20 | 1440 | < th | dose dependent | rect. | 2 | 12 |
| 119 | 34.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 7 |
| 135 | 34.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 10 |
| 151 | 34.38 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 8 |
| 169 | 34.40 | temperature | 20 | 1440 | < th | dose dependent | sin | 4 | NA |
| 177 | 34.41 | temperature | 25 | 1440 | < th | dose dependent | sin | 1 | NA |
| 456 | 34.64 | temperature | 20 | 1440 | < th | dose dependent | no | NA | NA |
| 457 | 34.64 | temperature | 20 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 513 | 34.66 | temperature | 20 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 543 | 34.69 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 4 |
| 672 | 34.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 780 | 34.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 11 |
| 792 | 34.89 | temperature | 25 | 90 | < th | dose dependent | rect. | 9 | 16 |
| 911 | 34.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 969 | 35.04 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 6 |