Os01g0958400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CRS1/YhbY domain containing protein.
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Os01g0958400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : CRS1/YhbY domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.06 | 0.182 | 8.28 | 1.04 | 0.287 | -0.434 | 0.378 | 1.51 | 0.187 | 18.8 | 21.22 | 1267 | -- | -- |
| 17.46 | 0.195 | 8.33 | 0.703 | 0.265 | -0.412 | 0.336 | -- | 0.113 | 18.2 | 13.64 | 8538 | -- | -- |
| 15.38 | 0.183 | 8.28 | 1.03 | 0.289 | -0.449 | -- | 1.48 | 0.187 | 19.1 | 21.1 | 1216 | -- | -- |
| 17.05 | 0.192 | 8.33 | 0.613 | 0.289 | -0.442 | -- | -- | 0.0879 | 19.4 | 17.06 | 1171 | -- | -- |
| 19.69 | 0.207 | 8.28 | 1.03 | -- | -0.445 | -- | 1.48 | 0.184 | -- | 21.47 | 1316 | -- | -- |
| 20.26 | 0.211 | 8.35 | 0.481 | 0.294 | -- | 0.431 | -- | -0.0126 | 18.3 | -- | -- | -- | -- |
| 20.71 | 0.213 | 8.35 | 0.476 | 0.296 | -- | -- | -- | -0.0113 | 18.4 | -- | -- | -- | -- |
| 21.09 | 0.214 | 8.33 | 0.623 | -- | -0.494 | -- | -- | 0.0727 | -- | 13.38 | 1333 | -- | -- |
| 25.79 | 0.237 | 8.36 | -- | 0.288 | -0.221 | -- | -- | -0.0332 | 18.9 | 9.439 | 1151 | -- | -- |
| 25.27 | 0.235 | 8.35 | 0.468 | -- | -- | -- | -- | -0.0175 | -- | -- | -- | -- | -- |
| 26.68 | 0.242 | 8.36 | -- | 0.29 | -- | -- | -- | -0.0643 | 18.5 | -- | -- | -- | -- |
| 29.98 | 0.255 | 8.35 | -- | -- | -0.234 | -- | -- | -0.0351 | -- | 13.73 | 1304 | -- | -- |
| 31.05 | 0.26 | 8.36 | -- | -- | -- | -- | -- | -0.0695 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 9 |
| 62 | 14.83 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 68 | 14.84 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 179 | 14.93 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 19 |
| 188 | 14.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 9 |
| 263 | 15.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 377 | 15.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 18 |
| 459 | 15.11 | temperature | 30 | 1440 | < th | dose dependent | sin | 17 | NA |
| 615 | 15.17 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 649 | 15.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 680 | 15.20 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 844 | 15.26 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 845 | 15.26 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 888 | 15.27 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 958 | 15.29 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 3 |