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Os01g0957900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Armadillo-like helical domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.85 (0.0285) R2 : 0.751
β1 : 1.3 (0.105) R2dD : 0.0877 R2D : 0.0912
β2 : 1.25 (0.081) R2dC : 0.18 R2C : 0.389
β3 : 1.83 (0.0991) R2dE : 0.257 R2E : 0.492
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.172 (0.061) R2dN8 : 0.00581 R2N8 : -0.00397
σ : 0.534
deviance : 131.21
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_____
C
peak time of C : 14.2
E
wheather : temperature
threshold : 4.19
memory length : 107
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 8.1
open length of G : 19

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
129.7 0.535 7.85 1.33 1.24 1.83 -0.0151 1.18 0.167 14.4 7.232 99 8.17 19.1
130.84 0.533 7.86 1.28 1.26 1.82 0.339 -- 0.169 14.4 5.953 89 8.27 19
129.35 0.53 7.86 1.34 1.26 1.8 -- 1.07 0.166 14.3 4.568 113 8.08 19
131.21 0.534 7.85 1.3 1.25 1.83 -- -- 0.172 14.2 4.19 107 8.1 19
163.82 0.596 7.85 1.28 -- 2.6 -- 2.12 0.198 -- 11.64 23 8.82 17
181.81 0.632 7.87 1.47 2.29 -- 1 -- 0.221 15.8 -- -- -- --
184.8 0.637 7.86 1.49 2.29 -- -- -- 0.226 15.8 -- -- -- --
156.25 0.582 7.82 1.27 -- 2.68 -- -- 0.203 -- 12.32 31 8.92 14.9
171.77 0.61 7.9 -- 1.07 2.13 -- -- -0.0307 14.2 11.05 79 8.3 19.1
474.99 1.02 7.86 1.39 -- -- -- -- 0.165 -- -- -- -- --
242.99 0.729 7.9 -- 2.26 -- -- -- 0.061 15.8 -- -- -- --
186.22 0.636 7.89 -- -- 2.67 -- -- 0.0292 -- 10.72 27 8.82 15
526 1.07 7.89 -- -- -- -- -- 0.011 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 131.51 temperature 10.0 90 > th dose dependent rect. 8 19
3 134.32 temperature 10.0 10 > th dose dependent rect. 9 17
4 134.41 temperature 10.0 10 > th dose dependent rect. 9 19
11 135.64 temperature 10.0 270 > th dose dependent rect. 6 7
12 135.64 temperature 10.0 90 > th dose dependent rect. 8 7
26 137.98 temperature 15.0 270 > th dose dependent rect. 9 1
32 138.32 temperature 15.0 10 > th dose dependent rect. 8 7
45 138.81 radiation 40.0 270 < th dose dependent rect. 2 15
65 139.54 radiation 20.0 270 < th dose dependent rect. 2 13
81 140.22 temperature 10.0 270 > th dose dependent rect. 20 15
101 140.80 wind 5.0 270 < th dose independent rect. 3 2
118 141.01 radiation 30.0 270 < th dose dependent sin 7 NA
120 141.04 radiation 1.0 270 > th dose dependent rect. 8 2
127 141.22 radiation 40.0 90 < th dose dependent rect. 13 19
128 141.26 radiation 40.0 270 < th dose independent rect. 11 20
139 141.52 wind 1.0 270 > th dose independent rect. 1 6
140 141.53 atmosphere 1000.0 90 > th dose dependent rect. 3 5
147 141.62 wind 9.0 270 < th dose independent rect. 5 22
152 141.77 radiation 20.0 270 < th dose dependent rect. 2 9
154 141.79 radiation 10.0 270 < th dose independent rect. 2 6
161 141.88 radiation 20.0 270 < th dose dependent rect. 2 7
167 141.98 wind 1.0 270 > th dose independent rect. 3 2
170 141.99 temperature 30.0 90 < th dose dependent rect. 3 16
171 142.01 wind 5.0 270 < th dose independent rect. 1 6
195 142.46 radiation 40.0 90 < th dose independent rect. 13 19
200 142.51 radiation 40.0 90 < th dose dependent rect. 4 15
208 142.64 precipitation 0.1 270 < th dose independent rect. 3 2
209 142.64 precipitation 0.1 270 < th dose dependent rect. 3 2
215 142.68 radiation 40.0 90 < th dose independent rect. 4 15
222 142.73 wind 9.0 90 < th dose independent rect. 8 19
229 142.83 wind 9.0 270 < th dose dependent rect. 7 6
240 142.94 radiation 10.0 270 > th dose independent sin 6 NA
242 142.95 radiation 1.0 270 > th dose dependent sin 8 NA
243 142.96 temperature 30.0 270 < th dose dependent rect. 3 2
249 143.08 radiation 40.0 10 < th dose dependent rect. 12 21
258 143.18 precipitation 0.1 90 < th dose independent rect. 3 5
259 143.18 precipitation 0.1 90 < th dose dependent rect. 3 5
263 143.32 radiation 10.0 270 < th dose independent rect. 2 15
267 143.37 radiation 40.0 270 < th dose independent rect. 2 15
273 143.40 atmosphere 995.0 270 > th dose dependent rect. 3 3
287 143.63 radiation 10.0 270 < th dose independent rect. 2 13
297 143.70 atmosphere 1010.0 270 < th dose independent rect. 3 3
311 143.81 temperature 10.0 270 > th dose independent rect. 3 3
313 143.81 temperature 30.0 270 < th dose independent rect. 3 3
314 143.81 humidity 50.0 270 > th dose independent rect. 3 3
317 143.81 atmosphere 995.0 270 > th dose independent rect. 3 3
319 143.81 radiation 20.0 270 < th dose independent rect. 3 3
322 143.81 radiation 30.0 90 < th dose independent rect. 3 6
323 143.81 temperature 10.0 270 > th dose independent rect. 6 21
341 143.86 radiation 10.0 90 > th dose independent rect. 8 6
353 143.93 radiation 40.0 90 < th dose dependent sin 3 NA
357 143.96 atmosphere 995.0 270 > th dose dependent rect. 4 1
364 144.02 radiation 1.0 270 < th dose independent rect. 3 2
373 144.07 temperature 10.0 90 > th dose independent rect. 3 5
375 144.07 temperature 30.0 90 < th dose independent rect. 3 5
376 144.07 humidity 50.0 90 > th dose independent rect. 3 5
378 144.07 atmosphere 995.0 90 > th dose independent rect. 3 5
379 144.07 atmosphere 1015.0 90 < th dose independent rect. 3 5
380 144.07 temperature 10.0 90 > th dose independent rect. 8 19
383 144.09 precipitation 0.1 90 < th dose independent rect. 8 19
384 144.09 precipitation 0.1 90 < th dose dependent rect. 8 19
410 144.22 temperature 15.0 90 > th dose independent rect. 8 7
411 144.23 wind 7.0 270 < th dose independent rect. 6 8
440 144.41 radiation 40.0 90 < th dose dependent rect. 15 17
443 144.44 radiation 10.0 270 > th dose independent rect. 17 20
446 144.47 humidity 90.0 90 < th dose independent rect. 8 7
449 144.48 precipitation 0.1 90 < th dose independent rect. 8 7
451 144.48 precipitation 0.1 90 < th dose dependent rect. 8 7
452 144.49 wind 9.0 90 < th dose independent rect. 8 7
455 144.51 radiation 10.0 270 > th dose independent rect. 6 7
479 144.63 wind 5.0 270 < th dose independent rect. 8 2
514 144.80 temperature 30.0 10 < th dose dependent rect. 4 16
522 144.86 radiation 1.0 90 > th dose dependent rect. 8 6
564 145.04 atmosphere 1015.0 90 < th dose independent rect. 8 7
565 145.04 temperature 10.0 90 > th dose independent rect. 15 17
580 145.11 radiation 1.0 270 < th dose independent rect. 3 9
605 145.22 radiation 40.0 10 < th dose independent rect. 12 21
608 145.24 radiation 10.0 10 > th dose independent rect. 9 6
609 145.24 radiation 40.0 90 < th dose independent rect. 15 17
635 145.33 precipitation 0.1 270 < th dose independent rect. 6 21
636 145.33 precipitation 0.1 270 < th dose dependent rect. 6 21
662 145.47 radiation 20.0 90 < th dose independent rect. 15 17
665 145.48 atmosphere 995.0 90 > th dose independent rect. 8 7
667 145.49 radiation 10.0 270 > th dose independent rect. 8 2
720 145.65 wind 9.0 10 < th dose independent rect. 9 19
721 145.65 wind 9.0 270 < th dose dependent rect. 3 3
737 145.73 radiation 40.0 10 < th dose independent rect. 4 16
749 145.79 radiation 40.0 10 < th dose dependent rect. 5 15
759 145.88 wind 5.0 270 < th dose independent rect. 7 4
762 145.89 wind 1.0 90 > th dose independent rect. 8 7
763 145.89 humidity 50.0 90 > th dose independent rect. 8 7
767 145.91 atmosphere 995.0 90 > th dose independent rect. 15 17
783 145.95 radiation 20.0 90 < th dose independent rect. 4 15
788 145.97 wind 9.0 270 < th dose dependent rect. 8 2
825 146.12 atmosphere 1000.0 10 > th dose dependent rect. 3 6
827 146.14 wind 9.0 90 < th dose independent rect. 15 17
829 146.15 wind 9.0 90 < th dose dependent rect. 3 5
839 146.25 radiation 40.0 10 < th dose dependent sin 1 NA
843 146.27 radiation 1.0 90 > th dose dependent sin 3 NA
846 146.27 temperature 30.0 90 < th dose dependent rect. 3 6
856 146.33 precipitation 0.1 90 < th dose independent rect. 15 17
858 146.33 precipitation 0.1 90 < th dose dependent rect. 15 17
861 146.37 humidity 90.0 10 < th dose independent rect. 9 6
881 146.49 radiation 20.0 10 < th dose independent rect. 4 16
882 146.50 temperature 15.0 270 > th dose independent rect. 6 7
887 146.52 radiation 30.0 90 < th dose independent rect. 3 8
935 146.73 radiation 1.0 10 > th dose dependent rect. 8 11
962 146.76 radiation 1.0 90 > th dose dependent rect. 8 9
991 146.84 radiation 10.0 270 < th dose independent sin 6 NA