BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0957900 Os01g0957900|AK068334
(1176 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23540.1 | chr4:12280547-12286420 REVERSE LENGTH=1132 516 e-146
AT2G34357.1 | chr2:14499236-14505555 FORWARD LENGTH=1281 227 3e-59
>AT4G23540.1 | chr4:12280547-12286420 REVERSE LENGTH=1132
Length = 1131
Score = 516 bits (1328), Expect = e-146, Method: Compositional matrix adjust.
Identities = 346/1035 (33%), Positives = 556/1035 (53%), Gaps = 54/1035 (5%)
Query: 137 DASQLPTGTVRSVVKSLGHLAFHVDAAADWGSVASPLEALLAASVDQRAKVRRCAQESVE 196
+ ++L ++R+ VK +G L DW S+ LL ++D+R KVRRCAQE +E
Sbjct: 121 EGTKLGVASLRAGVKCIGTLLIGFCDLNDWESLQIGFALLLKFAIDKRPKVRRCAQECLE 180
Query: 197 KLFAHLKQCGCGKKVSNAAIGMFDKH------IASVKNHVNLNSDAS-EGKEMEAANMLS 249
KLF L+ K+ SN + ++ ++S K D++ + + EAA++L+
Sbjct: 181 KLFGSLRSSTVIKEASNTVYALLKEYKPVLSDLSSTKIEEGSKVDSTLKSENAEAAHVLN 240
Query: 250 AMVVVVPYLSKKAMKTVFSEVYQLLTPCFSPLTRHVLKLMETLLDHLKAENVESDLVNLI 309
+ +P+LS K VFSE+ L+ FSPLTR +LK ++T+ + + + V ++ L+
Sbjct: 241 VLSATIPFLSAKVSSRVFSELCGLMASQFSPLTRQILKGIDTIFKNSEDKIVVPEIEGLV 300
Query: 310 PLLLAYLNYDEKKPDDTIVAALKLMKNCLAKLVG-RPNLWMEVLPSAFEAVSGYLILDRK 368
L +YL+ +K P DTIV L+K+ L K P L + LP +++G L
Sbjct: 301 TTLTSYLSLHDKNPADTIVHVTTLLKDALEKAYSVEPTLCLSKLPLVCSSLAGLLTSTDD 360
Query: 369 CSEDIAGLLQDCIDSHIDRNIILTGSQLCDRDYESLS---DAAAVKSICSSINNMLCACA 425
+ + +L+D I SHID+ +LT L ++D ++++ + A + +CS ++L +C
Sbjct: 361 IASKASTILKDLISSHIDKKKLLTEGSLSNQDEDNVTSGDNINAARCVCSVFESVLNSCD 420
Query: 426 SPPNS-ILTTALVLFLKLGESSYAFMKNIILTLSQIAAKT-DKESERKNVEECIGAAVIA 483
PN ILT +L KLGE SY KNIIL L+ + S +++++CIG+AV+A
Sbjct: 421 GIPNEHILTVINLLIEKLGELSYILAKNIILKLADLMKNAIGDTSSSQDLQQCIGSAVVA 480
Query: 484 LGPDKILSLIPIGFDEDRLTCSNTWLLPILDKYIYGASPQQFLERIVPLAESVQQASNMA 543
+GP ++L+L+PI + +C+N WL+PIL KYI GAS +++ IVPLA+S+ AS A
Sbjct: 481 MGPVRLLTLLPITLHAESHSCTNAWLIPILRKYIIGASLAYYVDNIVPLAKSLMLASKGA 540
Query: 544 KSARKCEDLKSCSNQLWNLLPAFCRYPVDICQNFGSLSKLLLEMLKCDKYLYKSAVKALQ 603
K + ++L++C ++L LLPAFC YPVD+ FGSL+KL+++ +K +++++ +LQ
Sbjct: 541 KKSTHGKELRACGHELLRLLPAFCNYPVDVANKFGSLAKLMVKFIKKKSFMHEAVALSLQ 600
Query: 604 QLVDGTRRLSSSEQNREIYVELSTLFSSKIINLSCPSFE-----RCSKKDARKNMKVLAS 658
LV+ QN+ + + + +K I+ + E SKK + KNMK LAS
Sbjct: 601 MLVN---------QNKGMPKPSTDMGEAKAISEEDATTELERGFHYSKKASTKNMKALAS 651
Query: 659 HSVYLLSTVTDYFLDSSPEKRSHLKDALRCLAQLSGSTNICNLFLSLVKRFGLEDTQSEQ 718
S LL T+ D F S E + K A+ CLA S+ + +SL+ +F D E
Sbjct: 652 SSTELLQTLVDVFTVSGTEISADFKAAIGCLASTLDSSVRKKILISLLNKF---DPAGES 708
Query: 719 ENIECQTNEV-DKKDEEGTDVDEEKNK-KRSLVMELISTFXXXXXXXXXXXXFGFVKSSL 776
E E Q N+ D DEE + K + KRS V++L S+F + V+ S
Sbjct: 709 ET-EGQVNQSNDSVDEEKENCSSTKTQLKRSAVLDLASSFVEGAKEDLIELIYNLVRQSF 767
Query: 777 LNNKQPCEGKALFALSIILKEHNEYSLARLDEIMMLLHGIKADLDNEVLEGQLLCYQYLL 836
+ A LS +L+EH + + E++ +L K D + C L+
Sbjct: 768 QATDEADLYGAYDTLSRVLQEHGWFCASHFAEVIEMLLSHKTPEDAASSRSRFACLHVLM 827
Query: 837 VHMIKANEENTSKKAFLILNELIVALK-SKKESRRLAYDVLLAIXXXXXXXXXXXXXXXX 895
H I+++ E ++KAFLILNE+I+ LK K+E R+ A D L+ +
Sbjct: 828 AHGIQSSTEEENEKAFLILNEMILTLKEGKEEHRKAACDTLVMVYTTLKNSSSITSDELC 887
Query: 896 QRLFTMVMGYLSSPAPHIVSGAIAALSLLIYNDANFCLEVPNLIPSVLVLLKHKAIEVIK 955
+L M+ GY+S +PHI SGA++ALS L+Y D CL P L+ SVL LL K+IE+IK
Sbjct: 888 PKLINMITGYISGTSPHIRSGAVSALSALVYKDPEICLSSPELLSSVLSLLHTKSIEIIK 947
Query: 956 ASLGFVKVLVTSLHSEKLLELQADIMSGILPWSSVTKHHFKGKVVLIMEILIRKCGFDAI 1015
A LGFVKVLV++ ++ L L +++ ILPWSSV++H+FK KV +I+EI++RKCG A+
Sbjct: 948 AVLGFVKVLVSTSQAQDLHSLLQNLLYEILPWSSVSRHYFKSKVTIIVEIMVRKCGTRAV 1007
Query: 1016 DLVTPEKYKAFVRSVEEGRKG---NHNPADGAESEAQQPTQHAAKRRKR-SDSDVGTGQE 1071
L TP+K+K+F+ +V E R G + + +++ + P++ KR R + S+ Q+
Sbjct: 1008 QLATPDKHKSFIETVLENRSGKSKDKEETNESQTTSIDPSRGPRKRNYREASSETTAKQD 1067
Query: 1072 GTHTRAPSRSLPAGKKEFFVKGARNARSPGVKSQRSKPSGRNGDRTNFKSKSEPRPGNGQ 1131
G + R+ ++ + + R+ P R G+R+ K R +G
Sbjct: 1068 GNKFKRQKRTY-----------QQHTPASDINQSRTGPQ-RPGNRSFGKQ----REASGN 1111
Query: 1132 NTKGDKPQGFNKRNR 1146
N K K ++NR
Sbjct: 1112 NHKSGKETRKPQKNR 1126
>AT2G34357.1 | chr2:14499236-14505555 FORWARD LENGTH=1281
Length = 1280
Score = 227 bits (578), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 218/867 (25%), Positives = 389/867 (44%), Gaps = 64/867 (7%)
Query: 185 AKVRRCAQESVEKLFAHLKQCGCGKKVSNAAIGMFDKHI-ASVKNHVNLNSDASEGKEME 243
KVR+ A + + + VS A MF ++ + K+ V A K++
Sbjct: 173 GKVRKLASSCLRDVLQKSHGTKAWQSVSGAITEMFQNYLDLAHKSEVGSTEGARGAKQV- 231
Query: 244 AANMLSAMVVVVPYLSKKAMKTVFSEVYQLLTPCFSP-LTRHVLKLMETLLDHLKAENVE 302
+LS + + +SKK + T+ E +++L P +TR V+ + + + +E
Sbjct: 232 -LYILSTLKECLALMSKKHIATLI-EGFKVLMILRDPYITRPVIDSLNAVCLNPTSEVPV 289
Query: 303 SDLVNLIPLLLAYLNYDEKKPDDTIVAALKLMKNCLAKLVGRPNLWMEVLPSAFEAVSGY 362
L+ ++ L + E D A L +L + LPS F ++
Sbjct: 290 EALLEVLSLAAGLFSGHETSADAMTFTARLLKVGMTRSFTLNRDLCVVKLPSVFNGLNDI 349
Query: 363 LILDRK-----CSEDIAGLLQDCIDSHIDRNII--LTGSQLCDRDYESLSDAAAVKSICS 415
+ + + ++ + L+ CID + R + + S L R ++ +C+
Sbjct: 350 IASEHEEAIFAATDALKSLIFSCIDESLIREGVNEIRNSNLNVRK----PSPTVIEKLCA 405
Query: 416 SINNML-CACASPPNSILTTALVLFLKLGESSYAFMKNIILTLSQIAAKTDKE-SERKNV 473
++ ++L + + +F KLGE S FM+N + LS + D+ RK +
Sbjct: 406 TVESLLDYKYHAVWDMAFQVVSAMFDKLGEHSAYFMRNTLQGLSDMQDLPDEGFPYRKQL 465
Query: 474 EECIGAAVIALGPDKILSLIPIGFDEDRLTCSNTWLLPILDKYIYGASPQQFLERIVPLA 533
EC+G+A+ A+GP+ LS++ + + + L+ WL PIL +Y G F E I +
Sbjct: 466 HECVGSALGAMGPETFLSIVRLNLEANDLSEVKVWLFPILKQYTVGGRLSFFTEAIFSMV 525
Query: 534 ESVQQASNMAK------SARKCEDLKSCSNQLWNLLPAFCRYPVDICQNFGSLSKLLLEM 587
E++ + K ++R + L LW LLP+FC YPVD ++F L ++L +
Sbjct: 526 ETMSHKAQKLKLQGLPVASRSVDSL---VYSLWALLPSFCNYPVDTVESFADLGRILCGV 582
Query: 588 LKCDKYLYKSAVKALQQLVDGTRRLSSSEQNREIYVELSTLFSSKIINLSCPSFERCSKK 647
L+ + +L L+ +QN+E+ VE + + N + P+ +R + +
Sbjct: 583 LQTQAETHGIICASLNILI---------QQNKEV-VEGKEVPT----NDASPAMQRATAR 628
Query: 648 ----DARKNMKVLASHSVYLLSTVTDYFLDSSPEKRSHLKDALRCLAQLSGSTNICNLFL 703
A N+KVL + LL ++ F + S + L+ A+ LA ++ + L
Sbjct: 629 YDSQHAAANLKVLRLCAPKLLDVLSRIFHECSKDDGGSLQSAIGNLASIAEKKTVSKLLF 688
Query: 704 SLVKRFGLEDTQSEQENIECQTNEVDKKDEEGTDVDEEKNKK-----RSLVMELISTFXX 758
++ LE T++ D+ G DVD +K R+ + +L+ +
Sbjct: 689 KTLQEL-LEATKTAIAQ--------DESPVSGMDVDNTADKNSSSNLRARLFDLLVSLLP 739
Query: 759 XXXXXXXXXXFGFVKSSLLNNKQPCEGKALFALSIILKEHNEYSLARLDEIMMLLHGIKA 818
F +K ++ ++K + KA LS+ILK + + L+E+++L+H I
Sbjct: 740 GLDGQEVDTIFSSLKPAMQDSKGLIQKKAYKVLSVILKSSDGFVSKNLEELLVLMHNI-- 797
Query: 819 DLDNEVLEGQLLCYQYLLVHMIKANEENTSKKAFL-ILNELIVALKS-KKESRRLAYDVL 876
+L C +LL H + ++ K L E+I+ALK K++R AYDVL
Sbjct: 798 -CHVSAKRHKLDCLYFLLAHASRTDDLKERKDIVSSFLPEVILALKEVNKKTRNRAYDVL 856
Query: 877 LAIXXXXXXXXXXXXXXXXQRLFTMVMGYLSSPAPHIVSGAIAALSLLIYNDANFCLEVP 936
+ I F MV+G L+ P ++S A+ ++ L Y ++
Sbjct: 857 VQIGHAYADEENGGDNEKLHGYFDMVVGCLAGEKPQMISAAVKGVARLTYEFSDLISSAY 916
Query: 937 NLIPSVLVLLKHKAIEVIKASLGFVKVLVTSLHSEKLLELQADIMSGILPWSSVTKHHFK 996
NL+PS +LL+ K E+ KA+LG +KVLV E L ++ G+L W TK+ FK
Sbjct: 917 NLLPSTFLLLQRKNKEITKANLGLLKVLVAKSPVEGLHANLKSMVEGLLKWPEGTKNLFK 976
Query: 997 GKVVLIMEILIRKCGFDAIDLVTPEKY 1023
KV L++E+LI+KCG +A+ V PE++
Sbjct: 977 AKVRLLLEMLIKKCGTEAVKSVMPEEH 1003
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.132 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 22,230,039
Number of extensions: 901356
Number of successful extensions: 3453
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3440
Number of HSP's successfully gapped: 2
Length of query: 1176
Length of database: 11,106,569
Length adjustment: 110
Effective length of query: 1066
Effective length of database: 8,090,809
Effective search space: 8624802394
Effective search space used: 8624802394
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 117 (49.7 bits)