Os01g0955000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphoesterase family protein.
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Os01g0955000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphoesterase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 240.16 | 0.728 | 9.2 | -3.96 | 1.27 | 1.14 | -0.538 | 1.75 | -0.916 | 13 | 31.2 | 1310 | -- | -- |
| 241.16 | 0.723 | 9.21 | -4.1 | 1.29 | 1.33 | -0.669 | -- | -0.895 | 12.9 | 31.01 | 1293 | -- | -- |
| 241.27 | 0.723 | 9.19 | -3.95 | 1.27 | 1.13 | -- | 1.95 | -0.919 | 12.9 | 31.2 | 1293 | -- | -- |
| 241.4 | 0.724 | 9.23 | -4.28 | 1.27 | 1.35 | -- | -- | -0.919 | 12.9 | 31.2 | 1294 | -- | -- |
| 337 | 0.855 | 9.22 | -3.94 | -- | 1.1 | -- | 2.36 | -0.969 | -- | 30.84 | 1560 | -- | -- |
| 327.66 | 0.849 | 9.29 | -3.89 | 1.09 | -- | -0.834 | -- | -1.17 | 13 | -- | -- | -- | -- |
| 330.37 | 0.851 | 9.29 | -3.93 | 1.09 | -- | -- | -- | -1.18 | 12.8 | -- | -- | -- | -- |
| 335.22 | 0.853 | 9.36 | -4.37 | -- | 1.45 | -- | -- | -1.21 | -- | 27.93 | 1639 | -- | -- |
| 703.36 | 1.24 | 9.15 | -- | 1.26 | 0.823 | -- | -- | -0.583 | 13 | 33.57 | 1357 | -- | -- |
| 404.35 | 0.94 | 9.31 | -3.97 | -- | -- | -- | -- | -1.2 | -- | -- | -- | -- | -- |
| 736.69 | 1.27 | 9.19 | -- | 1.15 | -- | -- | -- | -0.74 | 12.9 | -- | -- | -- | -- |
| 798.28 | 1.32 | 9.2 | -- | -- | 1.16 | -- | -- | -0.728 | -- | 27.93 | 1639 | -- | -- |
| 819.24 | 1.34 | 9.21 | -- | -- | -- | -- | -- | -0.757 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 238.97 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 3 | 240.15 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 4 | 241.23 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 5 | 241.34 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 6 | 241.40 | radiation | 30 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 7 | 241.66 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 7 |
| 11 | 241.80 | radiation | 20 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 14 | 241.93 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 29 | 241.99 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 33 | 242.15 | temperature | 30 | 1440 | > th | dose dependent | sin | 15 | NA |
| 36 | 242.23 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 55 | 242.36 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 79 | 242.66 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 109 | 243.02 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 130 | 243.17 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 173 | 243.53 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 273 | 243.65 | radiation | 30 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 290 | 243.69 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 293 | 243.70 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 311 | 243.75 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 327 | 243.76 | radiation | 30 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 339 | 243.93 | temperature | 30 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 374 | 244.39 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 440 | 244.65 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 496 | 245.07 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 534 | 245.24 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 543 | 245.29 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 572 | 245.35 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 9 |
| 591 | 245.40 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 627 | 245.55 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 636 | 245.57 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 679 | 245.73 | radiation | 10 | 1440 | > th | dose independent | sin | 13 | NA |
| 722 | 245.98 | temperature | 30 | 14400 | > th | dose dependent | rect. | 16 | 3 |
| 811 | 246.40 | humidity | 70 | 1440 | < th | dose independent | sin | 14 | NA |
| 841 | 246.67 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 860 | 246.89 | wind | 5 | 43200 | > th | dose independent | rect. | 23 | 15 |
| 864 | 246.96 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 865 | 246.96 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 866 | 246.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 916 | 247.09 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 920 | 247.14 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 15 |
| 922 | 247.15 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 943 | 247.22 | wind | 5 | 43200 | > th | dose independent | sin | 6 | NA |
| 949 | 247.29 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 978 | 247.37 | humidity | 80 | 1440 | < th | dose dependent | sin | 15 | NA |
| 989 | 247.46 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 994 | 247.51 | wind | 5 | 43200 | < th | dose independent | sin | 6 | NA |