BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0955000 Os01g0955000|AK101291
(520 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G26870.1 | chr2:11457117-11459355 REVERSE LENGTH=515 708 0.0
AT1G07230.1 | chr1:2220509-2222778 REVERSE LENGTH=534 630 0.0
AT3G48610.1 | chr3:18011653-18013959 REVERSE LENGTH=521 594 e-170
AT3G03530.1 | chr3:842686-844970 REVERSE LENGTH=539 575 e-164
AT3G03540.1 | chr3:846350-848297 REVERSE LENGTH=522 571 e-163
AT3G03520.1 | chr3:837972-840511 REVERSE LENGTH=524 567 e-162
>AT2G26870.1 | chr2:11457117-11459355 REVERSE LENGTH=515
Length = 514
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/488 (68%), Positives = 394/488 (80%), Gaps = 3/488 (0%)
Query: 28 SPIKTVVVVVMENRSFDHMLGWMKRLNPEIDGVTGGEWNPTNASDPSSGRVYFGEGAEYV 87
SPIKT+VVVVMENRSFDHMLGWMK+LNPEI+GV G E NP + SDPSS ++ FG G+ YV
Sbjct: 25 SPIKTIVVVVMENRSFDHMLGWMKKLNPEINGVDGSESNPVSVSDPSSRKIKFGSGSHYV 84
Query: 88 DPDPGHSFQEIRQQIFGSDDAS-GPARMDGFVQQARSL--GDNMTAAVMNGFSPDSVAVY 144
DPDPGHSFQ IR+Q+FGS+D S P M+GFVQQA S NM+A+VMNGF PD V VY
Sbjct: 85 DPDPGHSFQAIREQVFGSNDTSMDPPPMNGFVQQAYSEDPSGNMSASVMNGFEPDKVPVY 144
Query: 145 RELVGEFAVFDRWFASVPSSTQPNRLFVHSATSGGATSNNPELLAKGYPQRTIFDNVHDA 204
+ LV EFAVFDRWFASVPSSTQPNR+FVHS TS GATSNNP LAKGYPQRTIFDN+ D
Sbjct: 145 KSLVSEFAVFDRWFASVPSSTQPNRMFVHSGTSAGATSNNPISLAKGYPQRTIFDNLDDE 204
Query: 205 GLSFGVYYQDVPAVLFYRNLRKLKYLTKFHPFHGAFRDHAARGSLPNYAVVEQHYMDSKS 264
SFG+YYQ++PAVLFY++LRKLKY+ KFH + +F+DHA +G LP Y V+EQ YMD+
Sbjct: 205 EFSFGIYYQNIPAVLFYQSLRKLKYVFKFHSYGNSFKDHAKQGKLPAYTVIEQRYMDTLL 264
Query: 265 HPANDDHPSHDVFQGQMLVKEVYETLRASPQWNQTLMVVTYDEHGGFYDHVPTPVTGVPS 324
PA+DDHPSHDV+QGQ +KEVYETLRASPQWN+TL+++TYDEHGG++DHVPTPV VPS
Sbjct: 265 EPASDDHPSHDVYQGQKFIKEVYETLRASPQWNETLLIITYDEHGGYFDHVPTPVRNVPS 324
Query: 325 PDGIVGPPPYNFAFDRLGVRVPAIVISPWINKGTVVHGPNGSPTATSEYEHSSIPATVKK 384
PDGIVGP P+ F F+RLG+RVP I +SPWI KGTVVHGPNGSP +SEYEHSSIPATVKK
Sbjct: 325 PDGIVGPDPFLFQFNRLGIRVPTIAVSPWIEKGTVVHGPNGSPFPSSEYEHSSIPATVKK 384
Query: 385 LFDLPQDFLTKRDAWAGTFESVVQGRTEPRTDCPEQLPMPMRIRLTEANEEAKLSEFQQE 444
LF+L FLTKRD WAGTFE+++Q R EPRTDCPE LP P++IR+ EANE+A L+EFQQE
Sbjct: 385 LFNLSSPFLTKRDEWAGTFENILQIRKEPRTDCPETLPEPVKIRMGEANEKALLTEFQQE 444
Query: 445 LVQLASVLNGDHQLSSLQDTIRDRMNVREGIAYMRGAVKRFFETGMSAKRMGVDDEQIVK 504
LVQLA+VL GD+ L++ I M V EG YM A+KRF E G A MG + E++V
Sbjct: 445 LVQLAAVLKGDNMLTTFPKEISKGMTVIEGKRYMEDAMKRFLEAGRMALSMGANKEELVH 504
Query: 505 MRPSLTTR 512
M+ SLT R
Sbjct: 505 MKTSLTGR 512
>AT1G07230.1 | chr1:2220509-2222778 REVERSE LENGTH=534
Length = 533
Score = 630 bits (1624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/489 (61%), Positives = 368/489 (75%), Gaps = 3/489 (0%)
Query: 29 PIKTVVVVVMENRSFDHMLGWMKRLNPEIDGVTGGEWNPTNASDPSSGRVYFGEGAEYVD 88
PIKT+VVVVMENRSFDH+LGW+K PEIDG+TG E NP N SDP+S +++ + A +VD
Sbjct: 37 PIKTIVVVVMENRSFDHILGWLKSTRPEIDGLTGKESNPLNVSDPNSKKIFVSDDAVFVD 96
Query: 89 PDPGHSFQEIRQQIFGSDDASGPARMDGFVQQARSLGDNMTAAVMNGFSPDSVAVYRELV 148
DPGHSFQ IR+QIFGS+D SG +M+GF QQ+ S+ M VM+GF P+ + VY EL
Sbjct: 97 MDPGHSFQAIREQIFGSNDTSGDPKMNGFAQQSESMEPGMAKNVMSGFKPEVLPVYTELA 156
Query: 149 GEFAVFDRWFASVPSSTQPNRLFVHSATSGGATSNNPELLAKGYPQRTIFDNVHDAGLSF 208
EF VFDRWFASVP+STQPNR +VHSATS G +SN + L KG+PQ+TIFD++ + GLSF
Sbjct: 157 NEFGVFDRWFASVPTSTQPNRFYVHSATSHGCSSNVKKDLVKGFPQKTIFDSLDENGLSF 216
Query: 209 GVYYQDVPAVLFYRNLRKLKYLTKFHPFHGAFRDHAARGSLPNYAVVEQHYMDSKSHPAN 268
G+YYQ++PA F+++LR+LK+L KFH + F+ A G LPNY+VVEQ Y D PAN
Sbjct: 217 GIYYQNIPATFFFKSLRRLKHLVKFHSYALKFKLDAKLGKLPNYSVVEQRYFDIDLFPAN 276
Query: 269 DDHPSHDVFQGQMLVKEVYETLRASPQWNQTLMVVTYDEHGGFYDHVPTPVTGVPSPDGI 328
DDHPSHDV GQ VKEVYETLR+SPQW + +++TYDEHGGFYDHVPTPV GVP+PDGI
Sbjct: 277 DDHPSHDVAAGQRFVKEVYETLRSSPQWKEMALLITYDEHGGFYDHVPTPVKGVPNPDGI 336
Query: 329 VGPPPYNFAFDRLGVRVPAIVISPWINKGTVVHGPNGSPTATSEYEHSSIPATVKKLFDL 388
+GP P+ F FDRLGVRVP +ISPWI KGTV+H P G PT S++EHSSIPATVKKLF+L
Sbjct: 337 IGPDPFYFGFDRLGVRVPTFLISPWIEKGTVIHEPEG-PTPHSQFEHSSIPATVKKLFNL 395
Query: 389 PQDFLTKRDAWAGTFESVVQGRTEPRTDCPEQLP-MPMRIRLTEANEEAKLSEFQQELVQ 447
FLTKRDAWAGTFE + R PR DCPE+LP + + +R A E++KLSEFQ EL+Q
Sbjct: 396 KSHFLTKRDAWAGTFEKYFRIRDSPRQDCPEKLPEVKLSLRPWGAKEDSKLSEFQVELIQ 455
Query: 448 LASVLNGDHQLSSLQDTIRDRMNVREGIAYMRGAVKRFFETGMSAKRMGVDDEQIVKMRP 507
LAS L GDH L+S D I M V EG Y AV++F E GM+A G D+ IV MRP
Sbjct: 456 LASQLVGDHLLNSYPD-IGKNMTVSEGNKYAEDAVQKFLEAGMAALEAGADENTIVTMRP 514
Query: 508 SLTTRTSPA 516
SLTTRTSP+
Sbjct: 515 SLTTRTSPS 523
>AT3G48610.1 | chr3:18011653-18013959 REVERSE LENGTH=521
Length = 520
Score = 594 bits (1532), Expect = e-170, Method: Compositional matrix adjust.
Identities = 290/486 (59%), Positives = 354/486 (72%), Gaps = 6/486 (1%)
Query: 28 SPIKTVVVVVMENRSFDHMLGWMKR-LNPEIDGVTGGEWNPTNASDPSSGRVYFGEGAEY 86
SPIKTVVV+V+ENRSFDH+LGWMK +NP I+GVTG E NP S + + F AE+
Sbjct: 37 SPIKTVVVLVLENRSFDHLLGWMKNSVNPTINGVTGQECNPVPNS---TQTICFTSDAEF 93
Query: 87 VDPDPGHSFQEIRQQIFGSDDASGPARMDGFVQQARSLGDNMTAAVMNGFSPDSVAVYRE 146
VDPDPGHSF+ + QQ+FGS P+ M GFV+QA S+ N++ VM GF P++V VY E
Sbjct: 94 VDPDPGHSFEAVEQQVFGSGPGQIPSMM-GFVEQALSMPGNLSETVMKGFRPEAVPVYAE 152
Query: 147 LVGEFAVFDRWFASVPSSTQPNRLFVHSATSGGATSNNPELLAKGYPQRTIFDNVHDAGL 206
LV EFAVFDRWF+S+P TQPNRLFV+SATS G+TS+ + LA+GYPQ+TIFD++H +
Sbjct: 153 LVKEFAVFDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKKQLAQGYPQKTIFDSLHSNDI 212
Query: 207 SFGVYYQDVPAVLFYRNLRKLKYLTKFHPFHGAFRDHAARGSLPNYAVVEQHYMDSKSHP 266
FG+Y+Q++P LFYRNLR+LKY+ H + F+ AA+G LP+ V+E Y D K P
Sbjct: 213 DFGIYFQNIPTTLFYRNLRQLKYIFNLHQYDLKFKKDAAKGKLPSLTVIEPRYFDLKGLP 272
Query: 267 ANDDHPSHDVFQGQMLVKEVYETLRASPQWNQTLMVVTYDEHGGFYDHVPTPVTGVPSPD 326
ANDDHPSHDV GQ LVKEVYE LR+SPQWN+TL+V+TYDEHGGFYDHV TP G+P+PD
Sbjct: 273 ANDDHPSHDVANGQKLVKEVYEALRSSPQWNETLLVITYDEHGGFYDHVKTPYVGIPNPD 332
Query: 327 GIVGPPPYNFAFDRLGVRVPAIVISPWINKGTVVHGPNGSPTATSEYEHSSIPATVKKLF 386
G GP P F FDRLGVRVP I++SPWI KGTVV G PT +SEYEHSSIPAT+KKLF
Sbjct: 333 GNTGPAPGFFKFDRLGVRVPTIMVSPWIQKGTVVSEAKG-PTESSEYEHSSIPATIKKLF 391
Query: 387 DLPQDFLTKRDAWAGTFESVVQGRTEPRTDCPEQLPMPMRIRLTEANEEAKLSEFQQELV 446
+L +FLT RDAWA TFE VV T PRTDCP LP +R TE E+A LSEFQ E+V
Sbjct: 392 NLSSNFLTHRDAWAATFEDVVSHLTTPRTDCPMTLPEVAPMRATEPKEDAALSEFQGEVV 451
Query: 447 QLASVLNGDHQLSSLQDTIRDRMNVREGIAYMRGAVKRFFETGMSAKRMGVDDEQIVKMR 506
QLA+VLNGDH LSS + I +M V++ Y++GA RF A ++G D IV MR
Sbjct: 452 QLAAVLNGDHFLSSFPEEIGKKMTVKQAHEYVKGATSRFIRASKEAMKLGADKSAIVDMR 511
Query: 507 PSLTTR 512
SLTTR
Sbjct: 512 SSLTTR 517
>AT3G03530.1 | chr3:842686-844970 REVERSE LENGTH=539
Length = 538
Score = 575 bits (1483), Expect = e-164, Method: Compositional matrix adjust.
Identities = 281/480 (58%), Positives = 349/480 (72%), Gaps = 12/480 (2%)
Query: 29 PIKTVVVVVMENRSFDHMLGWMKRLNPEIDGVTGGE--WNPTNASDPSSGRVYFGEGAEY 86
PIKT+VV+V ENRSFDH LGW K LN EIDGVT + N ++SD +S RV FG+ ++Y
Sbjct: 13 PIKTIVVLVQENRSFDHTLGWFKELNREIDGVTKSDPKSNTVSSSDTNSLRVVFGDQSQY 72
Query: 87 VDPDPGHSFQEIRQQIFGS-------DDASGPARMDGFVQQARSLGDNMTAAVMNGFSPD 139
V+PDPGHS Q+I +Q+FG D G M GF Q A M++AVMNGF P+
Sbjct: 73 VNPDPGHSIQDIYEQVFGKPWDSGKPDPNPGHPNMSGFAQNAERNKKGMSSAVMNGFKPN 132
Query: 140 SVAVYRELVGEFAVFDRWFASVPSSTQPNRLFVHSATSGGATSNNPELLAKGYPQRTIFD 199
++ VY+ELV FA+ DRWFASVP+STQPNRL+VHSATS GATSN+ +LL +G+PQ+TIF+
Sbjct: 133 ALPVYKELVQNFAICDRWFASVPASTQPNRLYVHSATSHGATSNDKKLLLEGFPQKTIFE 192
Query: 200 NVHDAGLSFGVYYQDVPAVLFYRNLRKLKYLTKFHPFHGAFRDHAARGSLPNYAVVEQHY 259
++ +AG SFG+YYQ P+ LFYRNLRKLKYLT FH + F+ G LPNY VVEQ +
Sbjct: 193 SLDEAGFSFGIYYQFPPSTLFYRNLRKLKYLTHFHQYGIQFKKDCKEGKLPNYVVVEQRW 252
Query: 260 MDSKSHPANDDHPSHDVFQGQMLVKEVYETLRASPQWNQTLMVVTYDEHGGFYDHVPTPV 319
D S PANDDHPSHDV +GQ LVKEVYE LR+SPQWN+ L ++TYDEHGGFYDHVPTPV
Sbjct: 253 FDLLSTPANDDHPSHDVSEGQKLVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPV 312
Query: 320 TGVPSPDGIVGPPPYNFAFDRLGVRVPAIVISPWINKGTVVHGPNGSPTATSEYEHSSIP 379
GVP+PDGI+GPPPYNF F+RLGVRVP ISPWI GTV+HGPNG P S+YEHSSIP
Sbjct: 313 DGVPNPDGILGPPPYNFEFNRLGVRVPTFFISPWIEPGTVIHGPNG-PYPRSQYEHSSIP 371
Query: 380 ATVKKLFDLPQDFLTKRDAWAGTFESVVQGRTEPRTDCPEQLPMPMRIRLTEANEEAKLS 439
ATVK +F L +DFL+KRD+WAGTFESV+ R PR DCPE L P+++R T A E A+LS
Sbjct: 372 ATVKTIFKL-KDFLSKRDSWAGTFESVIT-RDSPRQDCPETLSTPIKLRGTMAKENAQLS 429
Query: 440 EFQQELVQLASVLNGDHQLSSLQDTIRDRMNVREGIAYMRGAVKRFFETGMSAKRMGVDD 499
EFQ++LV +A+ L GD++ L + V + Y+ A ++F E A+ G D+
Sbjct: 430 EFQEDLVIMAAGLKGDYKNEELIHKLCKETCVADASKYVTNAFEKFLEESRKARDRGCDE 489
>AT3G03540.1 | chr3:846350-848297 REVERSE LENGTH=522
Length = 521
Score = 571 bits (1472), Expect = e-163, Method: Compositional matrix adjust.
Identities = 279/484 (57%), Positives = 350/484 (72%), Gaps = 12/484 (2%)
Query: 29 PIKTVVVVVMENRSFDHMLGWMKRLNPEIDGVTGGE--WNPTNASDPSSGRVYFGEGAEY 86
PIKT+VV+V ENRSFDH LGW K LN EIDGV + +NP +SD +S V FG+ ++Y
Sbjct: 12 PIKTIVVLVQENRSFDHTLGWFKELNREIDGVMKSDQKFNPGFSSDLNSHNVVFGDQSQY 71
Query: 87 VDPDPGHSFQEIRQQIFGS-------DDASGPARMDGFVQQARSLGDNMTAAVMNGFSPD 139
VDP+PGHS ++I +Q+FG D GPA M GF Q A M++AVMNGF PD
Sbjct: 72 VDPNPGHSIRDIYEQVFGKPWDSGHPDPNPGPATMSGFAQNAERKMKGMSSAVMNGFKPD 131
Query: 140 SVAVYRELVGEFAVFDRWFASVPSSTQPNRLFVHSATSGGATSNNPELLAKGYPQRTIFD 199
++ VY+ELV FA+ DRWFASVP +TQPNRLF+HSATS G T+N +LL +G+PQ+TIF+
Sbjct: 132 ALPVYKELVQNFAICDRWFASVPGATQPNRLFIHSATSHGTTNNERKLLIEGFPQKTIFE 191
Query: 200 NVHDAGLSFGVYYQDVPAVLFYRNLRKLKYLTKFHPFHGAFRDHAARGSLPNYAVVEQHY 259
++ +AG +FG+YYQ P LFYRNLRKLKYLT+FH + F+ G+LPNY VVEQ +
Sbjct: 192 SLDEAGFTFGIYYQCFPTTLFYRNLRKLKYLTRFHDYGLQFKKDCKEGNLPNYVVVEQRW 251
Query: 260 MDSKSHPANDDHPSHDVFQGQMLVKEVYETLRASPQWNQTLMVVTYDEHGGFYDHVPTPV 319
D +PANDDHPSHDV +GQ LVKEVYE LR+SPQWN+ L ++TYDEHGGFYDHVPTP+
Sbjct: 252 YDLLLNPANDDHPSHDVSEGQKLVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPL 311
Query: 320 TGVPSPDGIVGPPPYNFAFDRLGVRVPAIVISPWINKGTVVHGPNGSPTATSEYEHSSIP 379
GVP+PDGI+GPPPYNF F+RLGVRVP ISPWI GTV+HG NG P S+YEHSSIP
Sbjct: 312 DGVPNPDGILGPPPYNFEFNRLGVRVPTFFISPWIEPGTVLHGSNG-PYLMSQYEHSSIP 370
Query: 380 ATVKKLFDLPQDFLTKRDAWAGTFESVVQGRTEPRTDCPEQLPMPMRIRLTEANEEAKLS 439
ATVKK+F L +DFLTKRD+WAGTFESV+ R PR DCPE L P+++R T A E A+LS
Sbjct: 371 ATVKKIFKL-KDFLTKRDSWAGTFESVIT-RNSPRQDCPETLSNPVKMRGTVAKENAELS 428
Query: 440 EFQQELVQLASVLNGDHQLSSLQDTIRDRMNVREGIAYMRGAVKRFFETGMSAKRMGVDD 499
+FQ+ELV +A+ L GD++ L + + V + Y+ A +F E A+ G D+
Sbjct: 429 DFQEELVIVAAGLKGDYKNEELLYKLCKKTCVSDASKYVTKAFDKFVEESKKARERGGDE 488
Query: 500 EQIV 503
IV
Sbjct: 489 NDIV 492
>AT3G03520.1 | chr3:837972-840511 REVERSE LENGTH=524
Length = 523
Score = 567 bits (1462), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/497 (55%), Positives = 356/497 (71%), Gaps = 13/497 (2%)
Query: 29 PIKTVVVVVMENRSFDHMLGWMKRLNPEIDGVTGGE--WNPTNASDPSSGRVYFGEGAEY 86
PIKT+VV+V ENRSFDHMLGW K LNPEIDGV+ E NP + SDP+S +++FG+ ++
Sbjct: 15 PIKTIVVLVQENRSFDHMLGWFKELNPEIDGVSESEPRSNPLSTSDPNSAQIFFGKESQN 74
Query: 87 VDPDPGHSFQEIRQQIFG---SDDASGP-ARMDGFVQQARSLGDNMT-AAVMNGFSPDSV 141
+DPDPGHSFQ I +Q+FG SD++ P +M+GFVQ A ++ M+ VM GF P+ +
Sbjct: 75 IDPDPGHSFQAIYEQVFGKPFSDESPYPDPKMNGFVQNAEAITKGMSEKVVMQGFPPEKL 134
Query: 142 AVYRELVGEFAVFDRWFASVPSSTQPNRLFVHSATSGGATSNNPELLAKGYPQRTIFDNV 201
V++ELV EFAV DRWF+S+PSSTQPNRL+VH+ATS GA SN+ L +G+PQRT+F+++
Sbjct: 135 PVFKELVQEFAVCDRWFSSLPSSTQPNRLYVHAATSNGAFSNDTNTLVRGFPQRTVFESL 194
Query: 202 HDAGLSFGVYYQDVPAVLFYRNLRKLKYLTKFHPFHGAFRDHAARGSLPNYAVVEQHYMD 261
++G +FG+YYQ P LFYRN+RKLKY+ FH +H +F+ H G LPNY V+E Y
Sbjct: 195 EESGFTFGIYYQSFPNCLFYRNMRKLKYVDNFHQYHLSFKRHCKEGKLPNYVVIEPRYFK 254
Query: 262 SKSHPANDDHPSHDVFQGQMLVKEVYETLRASPQWNQTLMVVTYDEHGGFYDHVPTPVTG 321
S PANDDHP +DV +GQ LVKE+YE LRASPQWN+ L VV YDEHGG+YDHVPTPV G
Sbjct: 255 ILSAPANDDHPKNDVVEGQNLVKEIYEALRASPQWNEILFVVVYDEHGGYYDHVPTPVIG 314
Query: 322 VPSPDGIVGPPPYNFAFDRLGVRVPAIVISPWINKGTVVHGPNGSPTATSEYEHSSIPAT 381
VP+PDG+VGP PYNF FDRLGVRVPA++ISPWI GTV+H PNG P TS++EHSSIPAT
Sbjct: 315 VPNPDGLVGPEPYNFKFDRLGVRVPALLISPWIEPGTVLHEPNG-PEPTSQFEHSSIPAT 373
Query: 382 VKKLFDLPQDFLTKRDAWAGTFESVVQGRTEPRTDCPEQLPMPMRIR---LTEANEEAKL 438
+KK+F+L + FLTKRD WAGT ++V+ RT PRTDCP LP R R + E+ L
Sbjct: 374 LKKIFNL-KSFLTKRDEWAGTLDAVI-NRTSPRTDCPVTLPELPRARDIDIGTQEEDEDL 431
Query: 439 SEFQQELVQLASVLNGDHQLSSLQDTIRDRMNVREGIAYMRGAVKRFFETGMSAKRMGVD 498
++FQ EL+Q A+VL GDH + D+M V + Y+ A RF AK G D
Sbjct: 432 TDFQIELIQAAAVLKGDHIKDIYPFKLADKMKVLDAARYVEEAFTRFHGESKKAKEEGRD 491
Query: 499 DEQIVKMRPSLTTRTSP 515
+ +IV + T ++P
Sbjct: 492 EHEIVDLSKGSTRHSTP 508
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,644,749
Number of extensions: 538446
Number of successful extensions: 1244
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1217
Number of HSP's successfully gapped: 6
Length of query: 520
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 417
Effective length of database: 8,282,721
Effective search space: 3453894657
Effective search space used: 3453894657
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)