Os01g0954500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF702 family protein.
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Os01g0954500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF702 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 219.87 | 0.697 | 7.56 | 1.62 | 0.7 | -1.72 | 0.789 | 4.15 | -0.758 | 5.62 | 20.22 | 1406 | -- | -- |
| 221.33 | 0.693 | 7.65 | 0.963 | 0.671 | -2.17 | 0.647 | -- | -0.825 | 5.52 | 14.2 | 8401 | -- | -- |
| 220.98 | 0.692 | 7.56 | 1.65 | 0.735 | -1.77 | -- | 4.35 | -0.756 | 5.09 | 20.3 | 1321 | -- | -- |
| 222.67 | 0.695 | 7.64 | 1 | 0.685 | -2.21 | -- | -- | -0.804 | 5.43 | 12.87 | 8502 | -- | -- |
| 235.92 | 0.715 | 7.57 | 1.66 | -- | -1.89 | -- | 4.21 | -0.737 | -- | 20.46 | 1894 | -- | -- |
| 304.9 | 0.819 | 7.79 | -0.176 | 0.623 | -- | 0.957 | -- | -1.46 | 6.15 | -- | -- | -- | -- |
| 307.05 | 0.821 | 7.79 | -0.167 | 0.63 | -- | -- | -- | -1.46 | 5.9 | -- | -- | -- | -- |
| 243.51 | 0.727 | 7.66 | 1.01 | -- | -2.28 | -- | -- | -0.817 | -- | 9.231 | 7788 | -- | -- |
| 241.16 | 0.723 | 7.71 | -- | 0.692 | -1.69 | -- | -- | -1.1 | 5.41 | 12.25 | 6948 | -- | -- |
| 327.59 | 0.846 | 7.8 | -0.148 | -- | -- | -- | -- | -1.45 | -- | -- | -- | -- | -- |
| 307.79 | 0.821 | 7.79 | -- | 0.627 | -- | -- | -- | -1.44 | 5.91 | -- | -- | -- | -- |
| 261.74 | 0.754 | 7.73 | -- | -- | -1.69 | -- | -- | -1.12 | -- | 9.785 | 6320 | -- | -- |
| 328.18 | 0.846 | 7.8 | -- | -- | -- | -- | -- | -1.43 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 191.40 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 191.48 | radiation | 1 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 4 | 191.68 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 21 | 199.35 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 22 | 199.83 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 32 | 200.26 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 33 | 200.42 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 37 | 200.53 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 55 | 206.12 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 57 | 206.15 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 60 | 206.20 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 66 | 206.81 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 67 | 206.90 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 86 | 208.01 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 16 |
| 99 | 209.53 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 112 | 210.41 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 118 | 211.21 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 121 | 211.41 | humidity | 70 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 148 | 212.19 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 150 | 212.23 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 156 | 212.46 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 164 | 212.80 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 169 | 212.91 | radiation | 40 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 172 | 212.99 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 181 | 213.11 | radiation | 20 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 190 | 213.12 | radiation | 20 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 199 | 213.22 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 13 |
| 200 | 213.24 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 204 | 213.30 | radiation | 20 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 228 | 213.58 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 16 |
| 242 | 213.71 | humidity | 60 | 43200 | < th | dose independent | sin | 8 | NA |
| 244 | 213.71 | wind | 5 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 249 | 213.77 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 255 | 213.82 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 273 | 213.94 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 20 |
| 307 | 214.02 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 331 | 214.35 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 359 | 214.60 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 23 |
| 427 | 214.82 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 452 | 214.88 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 477 | 214.99 | radiation | 30 | 43200 | < th | dose independent | sin | 3 | NA |
| 504 | 215.09 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 507 | 215.10 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 512 | 215.17 | radiation | 20 | 43200 | < th | dose independent | rect. | 13 | 21 |
| 516 | 215.19 | radiation | 20 | 43200 | < th | dose independent | sin | 10 | NA |
| 533 | 215.23 | radiation | 40 | 43200 | < th | dose independent | sin | 21 | NA |
| 575 | 215.27 | radiation | 30 | 43200 | < th | dose independent | rect. | 6 | 15 |
| 605 | 215.28 | radiation | 30 | 43200 | < th | dose independent | no | NA | NA |
| 674 | 215.29 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 715 | 215.33 | radiation | 30 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 722 | 215.39 | humidity | 60 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 891 | 215.74 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 924 | 215.81 | radiation | 40 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 958 | 215.95 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 980 | 216.03 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |