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Os01g0946200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : No apical meristem (NAM) protein domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0209) R2 : 0.0694
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.257 (0.0441) R2dN8 : 0.0896 R2N8 : 0.0694
σ : 0.394
deviance : 71.38
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
50.19 0.333 12.7 -0.343 0.179 1.07 -0.653 -0.254 0.07 23.9 18.3 3433 -- --
49.91 0.329 12.6 -0.278 0.173 1.08 -0.654 -- 0.0856 23.2 18.3 2748 -- --
51.34 0.334 12.7 -0.28 0.169 1.01 -- -0.318 0.0709 23.6 18.4 2646 -- --
51.46 0.334 12.6 -0.249 0.161 1.09 -- -- 0.0941 23.6 18.3 2651 -- --
52.38 0.337 12.6 -0.27 -- 1.03 -- -0.272 0.0897 -- 18.4 2386 -- --
65.45 0.379 12.6 0.207 0.2 -- -0.653 -- 0.278 0.0881 -- -- -- --
67.26 0.384 12.6 0.232 0.204 -- -- -- 0.28 0.587 -- -- -- --
52.56 0.338 12.6 -0.253 -- 1.09 -- -- 0.092 -- 18.3 2408 -- --
52.31 0.337 12.6 -- 0.15 1.04 -- -- 0.14 23.8 18 2490 -- --
69.87 0.391 12.6 0.239 -- -- -- -- 0.283 -- -- -- -- --
68.68 0.388 12.6 -- 0.208 -- -- -- 0.254 0.641 -- -- -- --
53.54 0.341 12.6 -- -- 1.05 -- -- 0.14 -- 17.91 2398 -- --
71.38 0.394 12.6 -- -- -- -- -- 0.257 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.29 wind 9 43200 < th dose independent rect. 16 4
2 47.83 wind 9 43200 > th dose independent rect. 16 4
5 48.26 humidity 70 43200 > th dose independent rect. 4 9
6 48.26 wind 7 43200 < th dose independent rect. 16 14
8 48.27 humidity 70 43200 < th dose independent rect. 3 10
10 48.28 humidity 70 43200 < th dose independent rect. 2 12
12 48.28 wind 7 43200 > th dose independent rect. 16 14
14 48.29 humidity 70 43200 < th dose independent rect. 24 15
17 48.31 humidity 70 43200 < th dose independent sin 4 NA
27 48.36 humidity 70 43200 > th dose independent sin 4 NA
36 48.38 wind 7 43200 > th dose dependent rect. 15 16
40 48.39 wind 7 43200 > th dose dependent rect. 16 4
45 48.40 wind 9 43200 < th dose independent rect. 14 18
60 48.44 wind 9 43200 > th dose independent rect. 13 19
66 48.45 humidity 70 43200 < th dose independent rect. 19 21
87 48.49 humidity 70 43200 > th dose independent rect. 10 1
88 48.49 humidity 70 43200 < th dose independent rect. 10 2
91 48.49 wind 9 43200 > th dose independent rect. 8 12
98 48.50 wind 9 43200 < th dose independent rect. 8 12
101 48.50 wind 9 43200 > th dose independent rect. 11 22
120 48.52 wind 1 14400 < th dose dependent rect. 22 4
133 48.54 humidity 70 43200 < th dose independent rect. 5 21
134 48.54 humidity 70 43200 < th dose independent rect. 7 21
141 48.54 humidity 70 43200 < th dose independent rect. 9 23
144 48.55 humidity 70 43200 < th dose independent no NA NA
148 48.55 humidity 70 43200 < th dose independent rect. 9 19
168 48.56 humidity 70 43200 > th dose independent rect. 18 22
169 48.56 humidity 70 43200 > th dose independent rect. 22 22
175 48.57 humidity 70 43200 < th dose independent rect. 10 16
182 48.57 wind 9 43200 > th dose independent rect. 9 21
183 48.57 wind 9 43200 < th dose independent rect. 11 22
198 48.58 humidity 70 43200 > th dose independent rect. 6 20
222 48.59 humidity 70 43200 < th dose independent rect. 14 23
227 48.60 humidity 70 43200 > th dose independent rect. 9 17
257 48.61 humidity 70 43200 > th dose independent rect. 9 23
258 48.61 humidity 70 43200 > th dose independent rect. 16 23
260 48.62 humidity 70 43200 > th dose independent no NA NA
288 48.63 wind 7 43200 > th dose dependent rect. 13 20
316 48.65 wind 7 43200 > th dose dependent rect. 18 2
319 48.66 radiation 30 43200 < th dose independent rect. 9 1
343 48.67 wind 9 43200 < th dose independent rect. 9 21
347 48.68 wind 9 43200 > th dose independent sin 22 NA
392 48.71 wind 7 43200 > th dose dependent rect. 8 11
394 48.71 wind 7 43200 > th dose dependent rect. 11 22
395 48.72 radiation 20 43200 < th dose independent rect. 13 1
410 48.72 radiation 20 43200 < th dose dependent rect. 13 1
472 48.77 wind 7 43200 > th dose dependent rect. 9 21
473 48.78 wind 9 43200 < th dose independent sin 22 NA
493 48.79 wind 9 43200 < th dose independent rect. 24 20
494 48.79 humidity 90 43200 < th dose dependent rect. 19 1
514 48.81 humidity 70 43200 < th dose independent sin 17 NA
515 48.81 radiation 10 43200 < th dose independent rect. 5 2
525 48.81 radiation 1 43200 > th dose dependent rect. 18 12
527 48.82 wind 7 43200 < th dose independent sin 13 NA
532 48.82 wind 9 43200 < th dose independent rect. 8 15
540 48.82 wind 7 43200 > th dose dependent sin 22 NA
562 48.84 radiation 10 43200 < th dose independent rect. 17 14
580 48.85 wind 7 43200 > th dose independent sin 13 NA
594 48.86 radiation 10 43200 < th dose independent rect. 17 1
620 48.86 wind 9 43200 < th dose independent rect. 21 23
634 48.88 humidity 70 43200 > th dose independent sin 17 NA
669 48.90 wind 7 43200 > th dose dependent rect. 4 15
698 48.92 wind 9 43200 > th dose independent rect. 21 23
727 48.94 humidity 50 43200 > th dose dependent rect. 19 2
764 48.96 wind 7 43200 > th dose dependent rect. 21 22
780 48.97 wind 7 43200 > th dose dependent sin 14 NA
848 49.02 wind 9 43200 < th dose independent rect. 5 18
864 49.03 radiation 30 43200 < th dose independent rect. 24 9
865 49.03 radiation 30 43200 < th dose independent rect. 22 11
872 49.03 radiation 30 43200 < th dose independent rect. 18 15
890 49.04 radiation 30 43200 < th dose independent rect. 6 3
898 49.04 humidity 70 43200 > th dose independent rect. 14 11
927 49.05 wind 9 43200 < th dose independent rect. 24 23
928 49.05 humidity 80 43200 < th dose dependent rect. 10 1
934 49.06 humidity 70 43200 > th dose independent rect. 18 1
970 49.07 wind 9 43200 > th dose independent rect. 24 23
976 49.08 humidity 80 43200 < th dose independent rect. 19 6
990 49.08 radiation 1 43200 > th dose dependent rect. 13 1
991 49.08 radiation 1 43200 > th dose dependent rect. 4 2