Os01g0945600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid/polyamine transporter I family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0945600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Amino acid/polyamine transporter I family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 400.47 | 0.94 | 5.84 | 5.16 | 1.15 | -3.3 | 0.541 | -2.12 | 1.14 | 13.3 | 16.56 | 242 | -- | -- |
| 402.24 | 0.934 | 5.79 | 5.51 | 1.16 | -3.18 | 0.355 | -- | 1.24 | 13.3 | 18.05 | 242 | -- | -- |
| 400.65 | 0.932 | 5.82 | 5.32 | 1.13 | -3.15 | -- | -1.1 | 1.21 | 13.4 | 17.9 | 264 | -- | -- |
| 401.87 | 0.934 | 5.8 | 5.51 | 1.1 | -3.11 | -- | -- | 1.24 | 13.5 | 18.01 | 279 | -- | -- |
| 403.43 | 0.935 | 5.83 | 5.41 | -- | -2.85 | -- | -0.719 | 1.2 | -- | 18.79 | 745 | -- | -- |
| 544.26 | 1.09 | 5.9 | 4.73 | 0.914 | -- | 0.956 | -- | 0.716 | 8.95 | -- | -- | -- | -- |
| 547.26 | 1.1 | 5.9 | 4.76 | 0.908 | -- | -- | -- | 0.717 | 9.15 | -- | -- | -- | -- |
| 404.15 | 0.936 | 5.81 | 5.55 | -- | -2.83 | -- | -- | 1.24 | -- | 19.08 | 751 | -- | -- |
| 1117.07 | 1.56 | 6.02 | -- | 0.74 | -1.13 | -- | -- | 0.173 | 10.2 | 27.86 | 455 | -- | -- |
| 594.94 | 1.14 | 5.93 | 4.76 | -- | -- | -- | -- | 0.722 | -- | -- | -- | -- | -- |
| 1145.08 | 1.58 | 6.02 | -- | 0.915 | -- | -- | -- | 0.187 | 8.76 | -- | -- | -- | -- |
| 1134.86 | 1.57 | 6.06 | -- | -- | -1.48 | -- | -- | 0.143 | -- | 27.42 | 696 | -- | -- |
| 1192.6 | 1.61 | 6.05 | -- | -- | -- | -- | -- | 0.194 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 389.68 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 2 | 391.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 3 | 391.89 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 20 |
| 10 | 393.75 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 40 | 397.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 13 |
| 50 | 398.46 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 69 | 398.62 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 95 | 399.78 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 100 | 399.93 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 104 | 400.17 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 106 | 400.24 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 125 | 401.00 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 126 | 401.07 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 144 | 401.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 147 | 401.66 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 150 | 401.91 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 161 | 402.12 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 171 | 402.26 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 19 |
| 227 | 403.14 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 230 | 403.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 250 | 403.55 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 285 | 403.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 14 |
| 296 | 404.00 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 336 | 404.34 | temperature | 20 | 1440 | > th | dose dependent | sin | 6 | NA |
| 434 | 405.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 14 |
| 597 | 405.80 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 18 |
| 633 | 405.91 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 802 | 406.50 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 10 |
| 815 | 406.55 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 906 | 406.89 | radiation | 10 | 4320 | < th | dose independent | rect. | 16 | 15 |
| 925 | 406.97 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 982 | 407.20 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |