Os01g0942200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os01g0942200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 255.24 | 0.751 | 3.29 | -0.637 | 0.621 | 2.56 | -2.57 | 0.785 | -0.195 | 17.9 | 18.9 | 4431 | -- | -- |
| 255.44 | 0.744 | 3.28 | -0.612 | 0.62 | 2.27 | -2.49 | -- | -0.185 | 17.8 | 18.94 | 4440 | -- | -- |
| 269.03 | 0.764 | 3.28 | -0.603 | 0.625 | 2.4 | -- | 0.321 | -0.199 | 16.8 | 18.87 | 4306 | -- | -- |
| 269.05 | 0.764 | 3.28 | -0.6 | 0.626 | 2.28 | -- | -- | -0.196 | 16.8 | 18.9 | 4311 | -- | -- |
| 289.35 | 0.792 | 3.28 | -0.613 | -- | 2.53 | -- | 0.518 | -0.215 | -- | 18.85 | 4218 | -- | -- |
| 299.21 | 0.811 | 3.34 | -1.53 | 0.66 | -- | -2.77 | -- | -0.483 | 17.8 | -- | -- | -- | -- |
| 315.78 | 0.832 | 3.34 | -1.5 | 0.67 | -- | -- | -- | -0.492 | 16.7 | -- | -- | -- | -- |
| 285.74 | 0.787 | 3.28 | -0.729 | -- | 2.68 | -- | -- | -0.234 | -- | 18.72 | 2763 | -- | -- |
| 275.15 | 0.773 | 3.27 | -- | 0.618 | 2.65 | -- | -- | -0.0849 | 16.7 | 19.36 | 4376 | -- | -- |
| 339.59 | 0.861 | 3.34 | -1.53 | -- | -- | -- | -- | -0.509 | -- | -- | -- | -- | -- |
| 375.24 | 0.906 | 3.31 | -- | 0.698 | -- | -- | -- | -0.325 | 16.7 | -- | -- | -- | -- |
| 295.39 | 0.8 | 3.24 | -- | -- | 2.66 | -- | -- | -0.0676 | -- | 19.48 | 4236 | -- | -- |
| 401.12 | 0.935 | 3.3 | -- | -- | -- | -- | -- | -0.34 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 252.27 | humidity | 70 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 6 | 253.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 8 |
| 8 | 253.12 | humidity | 50 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 13 | 253.53 | humidity | 70 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 14 | 253.54 | humidity | 60 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 15 | 253.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 14 |
| 22 | 253.71 | temperature | 30 | 720 | < th | dose dependent | sin | 22 | NA |
| 26 | 253.80 | temperature | 20 | 4320 | < th | dose dependent | rect. | 2 | 2 |
| 28 | 253.84 | humidity | 60 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 29 | 253.85 | humidity | 50 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 35 | 253.98 | humidity | 70 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 40 | 254.13 | temperature | 20 | 4320 | < th | dose dependent | rect. | 2 | 6 |
| 54 | 254.24 | humidity | 60 | 43200 | < th | dose dependent | rect. | 22 | 12 |
| 101 | 254.78 | temperature | 15 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 118 | 255.03 | humidity | 50 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 140 | 255.22 | humidity | 60 | 43200 | < th | dose independent | rect. | 22 | 12 |
| 141 | 255.22 | temperature | 20 | 4320 | < th | dose dependent | sin | 9 | NA |
| 160 | 255.32 | temperature | 15 | 4320 | < th | dose dependent | rect. | 3 | 19 |
| 177 | 255.42 | temperature | 20 | 4320 | < th | dose dependent | rect. | 14 | 18 |
| 216 | 255.54 | humidity | 60 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 222 | 255.55 | temperature | 15 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 243 | 255.60 | temperature | 20 | 4320 | < th | dose dependent | rect. | 24 | 15 |
| 292 | 255.79 | humidity | 60 | 43200 | > th | dose independent | rect. | 22 | 12 |
| 349 | 255.97 | humidity | 60 | 43200 | > th | dose independent | rect. | 1 | 9 |
| 359 | 256.00 | temperature | 15 | 4320 | < th | dose dependent | rect. | 4 | 16 |
| 441 | 256.30 | temperature | 15 | 1440 | < th | dose independent | rect. | 2 | 5 |
| 504 | 256.50 | temperature | 20 | 4320 | < th | dose dependent | no | NA | NA |
| 525 | 256.61 | humidity | 60 | 43200 | < th | dose dependent | sin | 9 | NA |
| 550 | 256.76 | temperature | 15 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 596 | 256.93 | atmosphere | 1010 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 652 | 257.06 | temperature | 15 | 1440 | > th | dose independent | rect. | 2 | 5 |
| 699 | 257.19 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 13 |
| 752 | 257.33 | temperature | 15 | 4320 | < th | dose dependent | sin | 0 | NA |
| 761 | 257.35 | atmosphere | 1010 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 784 | 257.42 | temperature | 10 | 43200 | > th | dose independent | rect. | 7 | 10 |
| 826 | 257.53 | humidity | 50 | 43200 | < th | dose dependent | rect. | 14 | 19 |
| 867 | 257.61 | temperature | 15 | 1440 | > th | dose independent | rect. | 2 | 9 |
| 884 | 257.65 | humidity | 50 | 43200 | < th | dose independent | sin | 9 | NA |
| 911 | 257.77 | humidity | 50 | 43200 | > th | dose independent | sin | 9 | NA |
| 925 | 257.80 | humidity | 60 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 935 | 257.83 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 955 | 257.89 | humidity | 70 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 956 | 257.89 | temperature | 20 | 720 | < th | dose independent | rect. | 9 | 9 |
| 966 | 257.91 | humidity | 70 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 972 | 257.92 | temperature | 10 | 720 | > th | dose dependent | sin | 22 | NA |