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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0937900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.83 (0.0233) R2 : 0.00384
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.065 (0.0491) R2dN8 : 0.00495 R2N8 : 0.00384
σ : 0.439
deviance : 88.46
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
83.96 0.431 2.84 -0.0411 0.0478 -0.359 -0.561 0.262 0.0623 5.18 1.074 12 -- --
83.91 0.427 2.83 -0.0367 0.0481 -0.356 -0.598 -- 0.0637 5.09 1.091 16 -- --
84.71 0.429 2.84 -0.0482 0.0468 -0.363 -- 0.501 0.0596 4.64 1 13 -- --
84.8 0.429 2.83 -0.0349 0.0484 -0.344 -- -- 0.0663 4.16 1.095 16 -- --
84.61 0.428 2.84 -0.0594 -- -0.412 -- 0.592 0.061 -- 1.055 16 -- --
86.66 0.436 2.83 0.005 0.146 -- -0.531 -- 0.06 4.81 -- -- -- --
87.37 0.438 2.83 0.00674 0.142 -- -- -- 0.0626 4.28 -- -- -- --
84.91 0.429 2.83 -0.0366 -- -0.372 -- -- 0.0676 -- 1.05 16 -- --
84.83 0.429 2.83 -- 0.0491 -0.339 -- -- 0.0701 4.18 1.078 16 -- --
88.46 0.439 2.83 0.0124 -- -- -- -- 0.0664 -- -- -- -- --
87.37 0.437 2.83 -- 0.143 -- -- -- 0.0619 4.28 -- -- -- --
84.94 0.429 2.83 -- -- -0.367 -- -- 0.0717 -- 1.088 16 -- --
88.46 0.439 2.83 -- -- -- -- -- 0.065 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 77.96 wind 1.0 10 < th dose independent rect. 21 1
8 77.96 wind 1.0 10 < th dose dependent rect. 21 1
17 79.96 temperature 25.0 90 > th dose dependent rect. 1 3
18 80.03 wind 9.0 1440 < th dose independent rect. 3 1
19 80.03 temperature 10.0 1440 > th dose independent rect. 3 1
22 80.03 temperature 30.0 1440 < th dose independent rect. 3 1
26 80.03 humidity 50.0 1440 > th dose independent rect. 3 1
35 80.03 atmosphere 995.0 1440 > th dose independent rect. 3 1
36 80.03 radiation 1.0 1440 < th dose independent rect. 3 1
56 80.03 temperature 10.0 1440 > th dose independent rect. 4 23
59 80.03 radiation 1.0 1440 < th dose dependent rect. 3 1
77 80.09 temperature 20.0 30 > th dose dependent rect. 2 1
78 80.10 wind 3.0 30 < th dose dependent rect. 2 1
79 80.10 atmosphere 1005.0 30 > th dose dependent rect. 2 1
80 80.12 temperature 25.0 90 > th dose independent rect. 2 1
83 80.14 atmosphere 1005.0 30 > th dose independent rect. 2 1
85 80.15 wind 3.0 30 < th dose independent rect. 2 1
94 80.18 humidity 80.0 30 > th dose independent rect. 2 1
99 80.19 humidity 80.0 30 > th dose dependent rect. 2 1
101 80.20 temperature 10.0 30 > th dose independent rect. 2 1
103 80.20 temperature 30.0 30 < th dose independent rect. 2 1
104 80.20 humidity 50.0 30 > th dose independent rect. 2 1
107 80.20 atmosphere 995.0 30 > th dose independent rect. 2 1
109 80.20 atmosphere 1010.0 30 < th dose independent rect. 2 1
111 80.20 radiation 1.0 30 < th dose independent rect. 2 1
116 80.20 precipitation 0.1 30 < th dose independent rect. 2 1
117 80.20 temperature 10.0 30 > th dose independent rect. 3 23
119 80.20 humidity 50.0 30 > th dose dependent rect. 2 1
122 80.20 radiation 1.0 30 < th dose dependent rect. 2 1
127 80.20 precipitation 0.1 30 < th dose dependent rect. 2 1
131 80.26 precipitation 0.1 30 < th dose independent rect. 3 23
132 80.26 precipitation 0.1 30 < th dose dependent rect. 3 23
133 80.27 atmosphere 995.0 30 > th dose independent rect. 3 23
136 80.29 atmosphere 1015.0 30 < th dose dependent rect. 2 1
140 80.38 temperature 30.0 30 < th dose dependent rect. 2 1
149 80.47 wind 1.0 30 > th dose independent rect. 2 1
197 81.11 wind 9.0 30 < th dose independent rect. 3 23
203 81.53 wind 1.0 10 < th dose independent rect. 21 7
217 81.77 humidity 50.0 30 > th dose independent rect. 3 23
224 81.86 wind 1.0 10 < th dose independent rect. 11 17
239 82.12 wind 1.0 10 > th dose independent sin 16 NA
257 82.35 precipitation 0.1 1440 > th dose independent rect. 8 1
258 82.35 precipitation 0.1 1440 > th dose independent rect. 8 3
260 82.35 precipitation 0.1 1440 > th dose dependent rect. 8 1
261 82.35 precipitation 0.1 1440 > th dose dependent rect. 8 3
270 82.43 precipitation 0.1 1440 > th dose independent rect. 6 1
273 82.43 precipitation 0.1 1440 > th dose dependent rect. 6 1
275 82.44 precipitation 0.1 270 > th dose independent rect. 20 1
276 82.44 precipitation 0.1 270 > th dose dependent rect. 20 1
282 82.49 temperature 30.0 30 < th dose independent rect. 3 23
284 82.54 temperature 25.0 270 > th dose independent rect. 22 5
295 82.75 humidity 90.0 1440 > th dose independent rect. 9 2
299 82.78 humidity 90.0 1440 > th dose independent rect. 9 4
301 82.79 humidity 90.0 1440 < th dose independent rect. 9 2
304 82.82 wind 1.0 10 < th dose independent sin 16 NA
315 82.93 precipitation 0.1 1440 < th dose independent rect. 6 1
318 82.93 precipitation 0.1 1440 < th dose dependent rect. 6 1
328 82.97 atmosphere 1005.0 10 > th dose dependent rect. 2 4
334 82.99 wind 1.0 10 > th dose independent rect. 23 23
352 83.00 precipitation 0.1 1440 < th dose independent rect. 8 2
366 83.00 precipitation 0.1 1440 < th dose dependent rect. 8 2
380 83.06 humidity 90.0 1440 > th dose dependent rect. 10 1
381 83.07 wind 3.0 30 < th dose dependent rect. 2 3
409 83.26 radiation 10.0 1440 < th dose dependent rect. 8 1
427 83.36 wind 1.0 30 < th dose dependent rect. 21 6
451 83.46 atmosphere 1015.0 30 < th dose independent rect. 3 23
466 83.52 temperature 25.0 30 > th dose independent rect. 22 1
469 83.53 wind 9.0 1440 < th dose independent rect. 23 1
470 83.53 temperature 10.0 1440 > th dose independent rect. 23 1
473 83.53 temperature 30.0 1440 < th dose independent rect. 23 1
477 83.53 humidity 50.0 1440 > th dose independent rect. 23 1
487 83.53 atmosphere 995.0 1440 > th dose independent rect. 23 1
488 83.53 radiation 1.0 1440 < th dose independent rect. 23 1
508 83.53 temperature 10.0 1440 > th dose independent rect. 24 23
511 83.53 radiation 1.0 1440 < th dose dependent rect. 23 1
516 83.53 wind 1.0 720 < th dose dependent rect. 11 2
518 83.54 precipitation 0.1 1440 < th dose independent rect. 8 4
521 83.54 precipitation 0.1 1440 < th dose dependent rect. 8 4
523 83.56 humidity 90.0 30 < th dose independent rect. 22 1
524 83.56 temperature 25.0 30 > th dose dependent rect. 22 1
534 83.61 temperature 10.0 720 > th dose independent rect. 15 8
537 83.61 temperature 10.0 720 > th dose independent rect. 23 16
539 83.62 radiation 10.0 1440 < th dose independent rect. 8 1
544 83.62 humidity 90.0 1440 > th dose dependent rect. 9 4
551 83.64 wind 3.0 30 < th dose dependent rect. 2 7
557 83.66 atmosphere 995.0 720 > th dose independent rect. 15 8
563 83.68 atmosphere 995.0 720 > th dose independent rect. 23 16
564 83.68 wind 1.0 30 > th dose independent rect. 3 23
570 83.69 precipitation 0.1 1440 < th dose independent rect. 6 6
571 83.69 humidity 90.0 30 < th dose dependent rect. 22 1
572 83.69 precipitation 0.1 1440 < th dose dependent rect. 6 6
576 83.70 precipitation 0.1 720 < th dose independent rect. 15 8
580 83.70 precipitation 0.1 720 < th dose dependent rect. 15 8
581 83.70 wind 1.0 30 < th dose dependent rect. 11 16
587 83.72 precipitation 0.1 1440 < th dose independent rect. 6 4
592 83.72 precipitation 0.1 1440 < th dose dependent rect. 6 4
595 83.73 humidity 50.0 720 > th dose independent rect. 3 8
600 83.74 temperature 10.0 720 > th dose independent rect. 3 8
601 83.74 atmosphere 995.0 720 > th dose independent rect. 3 8
602 83.74 temperature 10.0 720 > th dose independent rect. 11 16
607 83.76 wind 1.0 720 > th dose independent rect. 15 8
610 83.77 wind 1.0 720 < th dose independent rect. 11 2
632 83.83 atmosphere 995.0 720 > th dose independent rect. 11 16
633 83.83 wind 1.0 30 > th dose dependent rect. 22 1
637 83.84 temperature 25.0 30 < th dose independent rect. 21 16
659 83.89 radiation 10.0 1440 > th dose independent rect. 8 2
669 83.91 wind 9.0 720 < th dose independent rect. 3 8
671 83.91 precipitation 0.1 720 < th dose independent rect. 11 16
673 83.91 precipitation 0.1 720 < th dose dependent rect. 11 16
686 83.96 atmosphere 1005.0 30 > th dose dependent rect. 22 1
696 83.99 humidity 80.0 30 > th dose independent rect. 22 1
697 83.99 precipitation 0.1 1440 > th dose independent rect. 2 1
699 83.99 atmosphere 995.0 30 > th dose dependent rect. 22 1
701 83.99 precipitation 0.1 1440 > th dose dependent rect. 2 1
708 84.01 wind 5.0 30 < th dose independent rect. 22 1
711 84.01 temperature 10.0 30 > th dose independent rect. 22 1
713 84.01 temperature 30.0 30 < th dose independent rect. 22 1
714 84.01 humidity 50.0 30 > th dose independent rect. 22 1
717 84.01 humidity 90.0 90 < th dose independent rect. 2 1
718 84.01 atmosphere 995.0 30 > th dose independent rect. 22 1
719 84.01 atmosphere 1010.0 30 < th dose independent rect. 22 1
721 84.01 radiation 1.0 30 < th dose independent rect. 22 1
726 84.01 temperature 10.0 30 > th dose independent rect. 23 23
727 84.01 radiation 1.0 30 < th dose dependent rect. 22 1
735 84.02 precipitation 0.1 30 < th dose independent rect. 22 1
737 84.02 precipitation 0.1 1440 > th dose independent rect. 6 4
743 84.02 precipitation 0.1 30 < th dose dependent rect. 22 1
745 84.02 precipitation 0.1 1440 > th dose dependent rect. 6 4
755 84.04 wind 1.0 30 > th dose independent rect. 22 1
757 84.04 radiation 10.0 1440 < th dose dependent rect. 22 12
761 84.05 temperature 25.0 720 > th dose independent rect. 22 1
765 84.05 radiation 10.0 1440 < th dose dependent rect. 3 7
776 84.07 wind 9.0 30 < th dose dependent rect. 22 1
778 84.08 wind 1.0 1440 > th dose independent rect. 11 1
792 84.09 temperature 25.0 720 > th dose dependent rect. 22 1
794 84.09 atmosphere 1015.0 30 < th dose dependent rect. 22 1
805 84.11 humidity 50.0 30 > th dose dependent rect. 22 1
809 84.13 wind 1.0 10 > th dose independent no NA NA
850 84.19 wind 1.0 720 > th dose independent rect. 11 8
904 84.24 temperature 20.0 1440 > th dose dependent rect. 8 2
907 84.25 temperature 30.0 30 < th dose dependent rect. 22 1
912 84.25 temperature 20.0 30 > th dose dependent rect. 22 7
918 84.27 precipitation 0.1 720 < th dose independent rect. 3 8
919 84.27 wind 1.0 10 > th dose independent rect. 15 13
924 84.27 precipitation 0.1 720 < th dose dependent rect. 3 8
940 84.30 wind 1.0 10 > th dose independent rect. 16 15
965 84.34 temperature 25.0 1440 < th dose dependent rect. 9 1
976 84.35 temperature 20.0 14400 > th dose dependent rect. 5 1