Os01g0936700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0936700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.64 | 0.617 | 3.02 | -0.221 | 0.263 | 1.02 | -0.983 | -0.969 | 0.0577 | 5.02 | 1010 | 59 | -- | -- |
| 173.46 | 0.613 | 3.01 | -0.203 | 0.263 | 0.974 | -0.918 | -- | 0.041 | 4.89 | 1011 | 59 | -- | -- |
| 174.81 | 0.616 | 3.01 | -0.219 | 0.26 | 1.02 | -- | -0.866 | 0.0604 | 4 | 1010 | 55 | -- | -- |
| 175.44 | 0.617 | 3.02 | -0.205 | 0.272 | 0.943 | -- | -- | 0.0306 | 3.95 | 1010 | 55 | -- | -- |
| 178.52 | 0.622 | 3.02 | -0.206 | -- | 0.983 | -- | -0.831 | 0.0549 | -- | 1010 | 60 | -- | -- |
| 188.11 | 0.643 | 3.06 | -0.144 | 0.216 | -- | -0.982 | -- | -0.15 | 4.76 | -- | -- | -- | -- |
| 190.2 | 0.646 | 3.06 | -0.141 | 0.221 | -- | -- | -- | -0.145 | 3.28 | -- | -- | -- | -- |
| 179.13 | 0.623 | 3.02 | -0.187 | -- | 0.924 | -- | -- | 0.0336 | -- | 1011 | 60 | -- | -- |
| 176.46 | 0.619 | 3.01 | -- | 0.258 | 0.92 | -- | -- | 0.0581 | 3.95 | 1010 | 54 | -- | -- |
| 192.95 | 0.649 | 3.06 | -0.132 | -- | -- | -- | -- | -0.139 | -- | -- | -- | -- | -- |
| 190.72 | 0.646 | 3.05 | -- | 0.218 | -- | -- | -- | -0.129 | 3.28 | -- | -- | -- | -- |
| 180.04 | 0.625 | 3.01 | -- | -- | 0.902 | -- | -- | 0.052 | -- | 1011 | 59 | -- | -- |
| 193.41 | 0.649 | 3.05 | -- | -- | -- | -- | -- | -0.125 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 165.37 | wind | 3 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 2 | 165.89 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 23 | 12 |
| 3 | 166.08 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 23 | 13 |
| 6 | 166.28 | wind | 5 | 90 | > th | dose independent | rect. | 8 | 1 |
| 8 | 166.50 | wind | 3 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 13 | 167.32 | atmosphere | 1010 | 30 | < th | dose dependent | sin | 7 | NA |
| 14 | 167.34 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 23 | 12 |
| 21 | 167.54 | wind | 5 | 10 | > th | dose independent | rect. | 10 | 1 |
| 34 | 167.79 | wind | 7 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 35 | 167.81 | wind | 7 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 36 | 167.83 | atmosphere | 1005 | 30 | > th | dose independent | sin | 6 | NA |
| 63 | 168.20 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 23 | 12 |
| 72 | 168.45 | atmosphere | 995 | 30 | > th | dose dependent | sin | 6 | NA |
| 85 | 168.67 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 21 | 5 |
| 88 | 168.70 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 23 | 3 |
| 104 | 168.87 | wind | 5 | 90 | > th | dose independent | rect. | 3 | 7 |
| 105 | 168.88 | wind | 5 | 90 | > th | dose independent | rect. | 5 | 5 |
| 109 | 168.98 | humidity | 90 | 90 | > th | dose independent | rect. | 8 | 1 |
| 117 | 169.11 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 23 | 21 |
| 118 | 169.12 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 126 | 169.26 | atmosphere | 1005 | 30 | < th | dose independent | sin | 6 | NA |
| 131 | 169.29 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 136 | 169.35 | wind | 3 | 90 | > th | dose dependent | rect. | 3 | 7 |
| 142 | 169.39 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 148 | 169.46 | wind | 3 | 90 | > th | dose dependent | rect. | 5 | 5 |
| 170 | 169.67 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 23 | 18 |
| 172 | 169.69 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 19 | 16 |
| 186 | 169.77 | humidity | 90 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 193 | 169.83 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 22 | 14 |
| 215 | 170.09 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 24 | 2 |
| 255 | 170.46 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 257 | 170.48 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 19 | 18 |
| 279 | 170.61 | wind | 9 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 284 | 170.62 | wind | 9 | 90 | > th | dose dependent | rect. | 19 | 15 |
| 318 | 170.84 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 24 | 11 |
| 321 | 170.86 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 4 | 23 |
| 338 | 170.92 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 20 | 16 |
| 339 | 170.92 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 19 | 20 |
| 346 | 170.95 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 20 | 1 |
| 348 | 170.97 | atmosphere | 1000 | 30 | < th | dose dependent | sin | 11 | NA |
| 358 | 171.03 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 21 | 23 |
| 365 | 171.05 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 16 | 11 |
| 387 | 171.17 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 23 | 3 |
| 398 | 171.20 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 399 | 171.20 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 416 | 171.28 | wind | 5 | 1440 | > th | dose dependent | rect. | 14 | 4 |
| 426 | 171.31 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 19 | 22 |
| 433 | 171.35 | atmosphere | 1000 | 30 | < th | dose dependent | rect. | 21 | 11 |
| 445 | 171.39 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 21 | 19 |
| 464 | 171.44 | wind | 5 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 480 | 171.54 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 18 | 4 |
| 485 | 171.56 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 21 | 5 |
| 494 | 171.58 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 22 | 5 |
| 525 | 171.67 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 22 | 1 |
| 577 | 171.83 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 18 | 5 |
| 587 | 171.85 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 23 | 15 |
| 611 | 171.90 | atmosphere | 1010 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 629 | 171.95 | atmosphere | 1000 | 30 | > th | dose independent | sin | 11 | NA |
| 693 | 172.07 | atmosphere | 1000 | 30 | < th | dose dependent | rect. | 16 | 16 |
| 713 | 172.13 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 18 | 22 |
| 725 | 172.16 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 9 | 1 |
| 751 | 172.23 | atmosphere | 1010 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 758 | 172.26 | atmosphere | 1000 | 90 | > th | dose dependent | rect. | 23 | 12 |
| 808 | 172.36 | wind | 7 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 881 | 172.49 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 23 | 18 |
| 900 | 172.53 | wind | 7 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 903 | 172.53 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 918 | 172.54 | atmosphere | 1010 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 931 | 172.56 | atmosphere | 1010 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 958 | 172.61 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 18 | 23 |
| 979 | 172.64 | atmosphere | 1010 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 988 | 172.65 | atmosphere | 1010 | 30 | < th | dose dependent | rect. | 11 | 23 |