Os01g0936000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to AT.I.24-1 protein (Fragment).
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Os01g0936000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to AT.I.24-1 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 398.32 | 0.938 | 3.18 | 0.823 | 0.211 | 41.3 | 0.81 | 163 | -0.279 | 13.4 | 9.801 | 40 | 1.31 | -- |
| 406.27 | 0.939 | 3.08 | 0.378 | 0.198 | 4.8 | 1.21 | -- | -0.204 | 14.8 | 8.928 | 29 | 0.135 | -- |
| 400.98 | 0.933 | 3.18 | 0.851 | 0.212 | 41.3 | -- | 164 | -0.274 | 13.4 | 9.802 | 39 | 1.28 | -- |
| 400.31 | 0.932 | 3.08 | 0.409 | 0.214 | 5.62 | -- | -- | -0.273 | 12.7 | 10.3 | 18 | 1.64 | -- |
| 403.72 | 0.936 | 3.18 | 0.845 | -- | 41.3 | -- | 163 | -0.278 | -- | 9.8 | 39 | 1.28 | -- |
| 432.9 | 0.975 | 3.1 | 0.346 | 0.258 | -- | 0.667 | -- | -0.303 | 13.3 | -- | -- | -- | -- |
| 434.72 | 0.976 | 3.09 | 0.369 | 0.257 | -- | -- | -- | -0.299 | 13.3 | -- | -- | -- | -- |
| 402.62 | 0.935 | 3.09 | 0.414 | -- | 6.03 | -- | -- | -0.281 | -- | 10.51 | 20 | 2.08 | -- |
| 404.48 | 0.937 | 3.1 | -- | 0.208 | 5.83 | -- | -- | -0.325 | 13.4 | 10.53 | 21 | 2.08 | -- |
| 438.8 | 0.979 | 3.1 | 0.359 | -- | -- | -- | -- | -0.305 | -- | -- | -- | -- | -- |
| 438.31 | 0.979 | 3.1 | -- | 0.251 | -- | -- | -- | -0.34 | 13.2 | -- | -- | -- | -- |
| 407.14 | 0.94 | 3.1 | -- | -- | 5.93 | -- | -- | -0.328 | -- | 10.5 | 22 | 2.08 | -- |
| 442.2 | 0.982 | 3.11 | -- | -- | -- | -- | -- | -0.344 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 395.55 | humidity | 80 | 90 | < th | dose independent | rect. | 22 | 1 |
| 2 | 396.06 | humidity | 80 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 3 | 397.14 | wind | 9 | 30 | > th | dose dependent | rect. | 10 | 2 |
| 31 | 398.22 | wind | 5 | 30 | > th | dose dependent | rect. | 23 | 1 |
| 36 | 399.82 | wind | 9 | 30 | > th | dose independent | rect. | 10 | 2 |
| 58 | 400.20 | radiation | 40 | 90 | > th | dose independent | rect. | 12 | 1 |
| 73 | 401.03 | radiation | 40 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 76 | 401.58 | humidity | 80 | 90 | < th | dose dependent | rect. | 22 | 3 |
| 79 | 401.90 | humidity | 80 | 90 | < th | dose dependent | rect. | 22 | 8 |
| 85 | 402.26 | humidity | 80 | 90 | < th | dose independent | rect. | 22 | 7 |
| 89 | 402.31 | wind | 9 | 30 | > th | dose dependent | sin | 6 | NA |
| 125 | 404.47 | wind | 9 | 30 | < th | dose independent | sin | 6 | NA |
| 126 | 404.58 | wind | 5 | 90 | > th | dose independent | rect. | 23 | 1 |
| 156 | 405.34 | wind | 9 | 30 | > th | dose independent | sin | 6 | NA |
| 222 | 407.74 | humidity | 60 | 30 | > th | dose independent | rect. | 5 | 23 |
| 225 | 407.99 | radiation | 10 | 10 | < th | dose independent | rect. | 12 | 1 |
| 230 | 408.43 | wind | 9 | 270 | > th | dose independent | rect. | 22 | 4 |
| 238 | 408.43 | wind | 9 | 270 | > th | dose dependent | rect. | 22 | 4 |
| 250 | 408.48 | wind | 9 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 254 | 408.48 | wind | 9 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 328 | 409.24 | humidity | 60 | 90 | < th | dose dependent | rect. | 17 | 21 |
| 329 | 409.34 | humidity | 60 | 10 | < th | dose dependent | rect. | 12 | 2 |
| 330 | 409.35 | humidity | 50 | 90 | < th | dose dependent | rect. | 12 | 2 |
| 332 | 409.41 | humidity | 60 | 90 | < th | dose independent | rect. | 12 | 1 |
| 348 | 410.56 | humidity | 60 | 10 | > th | dose independent | rect. | 13 | 23 |
| 354 | 410.85 | humidity | 50 | 90 | < th | dose independent | rect. | 17 | 21 |
| 357 | 410.96 | humidity | 80 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 362 | 411.35 | wind | 3 | 90 | > th | dose independent | rect. | 12 | 1 |
| 367 | 411.39 | humidity | 60 | 90 | > th | dose independent | rect. | 5 | 11 |
| 368 | 411.41 | humidity | 50 | 30 | < th | dose independent | rect. | 12 | 3 |
| 505 | 412.27 | humidity | 60 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 693 | 413.28 | humidity | 50 | 10 | < th | dose dependent | rect. | 12 | 6 |
| 798 | 414.00 | wind | 5 | 270 | > th | dose independent | rect. | 20 | 4 |
| 841 | 414.47 | wind | 1 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 864 | 414.65 | humidity | 50 | 10 | < th | dose dependent | sin | 14 | NA |
| 865 | 414.67 | humidity | 60 | 10 | > th | dose independent | rect. | 18 | 23 |
| 874 | 414.85 | radiation | 20 | 90 | > th | dose independent | rect. | 12 | 1 |
| 913 | 414.97 | humidity | 50 | 10 | < th | dose independent | sin | 15 | NA |
| 931 | 415.20 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 996 | 415.46 | humidity | 60 | 30 | > th | dose independent | rect. | 5 | 19 |