BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0936000 Os01g0936000|Os01g0936000
(125 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G62950.1 | chr3:23266303-23266614 FORWARD LENGTH=104 119 3e-28
AT2G47870.1 | chr2:19603339-19603650 FORWARD LENGTH=104 119 3e-28
AT3G21460.1 | chr3:7557567-7557875 REVERSE LENGTH=103 119 5e-28
AT2G30540.1 | chr2:13011259-13011567 REVERSE LENGTH=103 111 8e-26
AT4G15700.1 | chr4:8937545-8937853 FORWARD LENGTH=103 111 1e-25
AT4G15670.1 | chr4:8929237-8929545 FORWARD LENGTH=103 111 1e-25
AT4G15660.1 | chr4:8925928-8926236 FORWARD LENGTH=103 109 4e-25
AT1G06830.1 | chr1:2097189-2097488 FORWARD LENGTH=100 108 7e-25
AT4G15680.1 | chr4:8931813-8932121 FORWARD LENGTH=103 108 8e-25
AT4G15690.1 | chr4:8934444-8934752 FORWARD LENGTH=103 108 9e-25
AT2G47880.1 | chr2:19605124-19605432 FORWARD LENGTH=103 107 2e-24
AT3G02000.1 | chr3:332512-332922 REVERSE LENGTH=137 106 4e-24
AT5G14070.1 | chr5:4541915-4542337 FORWARD LENGTH=141 105 6e-24
AT3G62960.1 | chr3:23268780-23269088 FORWARD LENGTH=103 103 2e-23
AT5G18600.1 | chr5:6183466-6183774 REVERSE LENGTH=103 102 6e-23
AT3G62930.1 | chr3:23261538-23261846 REVERSE LENGTH=103 94 1e-20
AT1G03020.1 | chr1:698207-698515 REVERSE LENGTH=103 94 1e-20
AT1G28480.1 | chr1:10013634-10014047 REVERSE LENGTH=138 89 6e-19
AT4G33040.1 | chr4:15940779-15941213 REVERSE LENGTH=145 79 7e-16
AT5G63030.1 | chr5:25286352-25287517 FORWARD LENGTH=126 77 3e-15
AT5G11930.1 | chr5:3845165-3845611 REVERSE LENGTH=149 70 2e-13
AT5G40370.2 | chr5:16147826-16148900 REVERSE LENGTH=137 66 5e-12
AT5G20500.1 | chr5:6938652-6939665 FORWARD LENGTH=136 59 6e-10
AT4G28730.1 | chr4:14199174-14200712 FORWARD LENGTH=175 58 2e-09
AT1G77370.1 | chr1:29073916-29074642 FORWARD LENGTH=131 50 3e-07
>AT3G62950.1 | chr3:23266303-23266614 FORWARD LENGTH=104
Length = 103
Score = 119 bits (299), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 73/102 (71%)
Query: 3 ERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG 62
ER+ LSS++A VIF S+C MCH +KTLF ELG S A+HE+DKDP G+++ERAL +
Sbjct: 2 ERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERALRALGS 61
Query: 63 RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
P VPAVF+GG+ +G ++S H+ G L +L++A A+WL
Sbjct: 62 SNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIWL 103
>AT2G47870.1 | chr2:19603339-19603650 FORWARD LENGTH=104
Length = 103
Score = 119 bits (298), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 72/102 (70%)
Query: 3 ERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG 62
ERV L+S++A VIF S+C MCH +KTLF ELG S A+HE+DKDP G D+ERAL + G
Sbjct: 2 ERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVFG 61
Query: 63 RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
P VPAVF+GG+ VG V+S H+ G L +L+ + A+WL
Sbjct: 62 SNPAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLKASNAIWL 103
>AT3G21460.1 | chr3:7557567-7557875 REVERSE LENGTH=103
Length = 102
Score = 119 bits (297), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Query: 5 VARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVGRT 64
VARL+SQRAVVIF S C M H +K LF E GVS A+ E+D+D GKD+E ALA + G +
Sbjct: 4 VARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARL-GCS 62
Query: 65 PPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
P VPAVF+GGK VG + VM+LHL G L LL+EAGALWL
Sbjct: 63 PTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102
>AT2G30540.1 | chr2:13011259-13011567 REVERSE LENGTH=103
Length = 102
Score = 111 bits (278), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 3 ERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG 62
++V R+SS++ VVIF S+C M + V+ LF +LGV VHE+DKDP +++E+AL + G
Sbjct: 2 DKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRL-G 60
Query: 63 RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLR 97
+ PVPA+F+GGKL+G T++VMSLHL+G LVPL++
Sbjct: 61 CSTPVPAIFVGGKLIGSTNEVMSLHLSGSLVPLVK 95
>AT4G15700.1 | chr4:8937545-8937853 FORWARD LENGTH=103
Length = 102
Score = 111 bits (277), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Query: 3 ERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG 62
E + ++ S+++VVIF ++C M H +KTLF +LGV+ ++E+D+ GK++E ALA + G
Sbjct: 2 ENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQL-G 60
Query: 63 RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
+P VP VFIGG+LVG +QVMSLHL LVP+L+ AGALWL
Sbjct: 61 CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102
>AT4G15670.1 | chr4:8929237-8929545 FORWARD LENGTH=103
Length = 102
Score = 111 bits (277), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
Query: 3 ERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG 62
E++ +++S++++VIF ++C M H +KTLF +LGV+ ++E+D+ GK++E+ALA + G
Sbjct: 2 EKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQL-G 60
Query: 63 RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
+P VP VFIGG+LVG +QVMSLHL L+P+L+ GALWL
Sbjct: 61 CSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102
>AT4G15660.1 | chr4:8925928-8926236 FORWARD LENGTH=103
Length = 102
Score = 109 bits (272), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Query: 3 ERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG 62
E++ ++ S+++VVIF ++C M H +KTLF +LGV+ ++E+D+ GK++E ALA + G
Sbjct: 2 EKIQKMISEKSVVIFSNNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEYALAQL-G 60
Query: 63 RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
+P VP VFIGG+LVG +QVMSLHL L+P+L+ GALWL
Sbjct: 61 CSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRFGALWL 102
>AT1G06830.1 | chr1:2097189-2097488 FORWARD LENGTH=100
Length = 99
Score = 108 bits (270), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 3 ERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG 62
++V R+SS++ VVIF S+C + + V+ LF +LGV+ +HE+DKDP +++E+AL + G
Sbjct: 2 DKVMRMSSEKGVVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDPECREIEKALMRL-G 60
Query: 63 RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLR 97
+ PVPAVFIGGKLVG T++VMS+HL+ LVPL++
Sbjct: 61 CSKPVPAVFIGGKLVGSTNEVMSMHLSSSLVPLVK 95
>AT4G15680.1 | chr4:8931813-8932121 FORWARD LENGTH=103
Length = 102
Score = 108 bits (269), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Query: 3 ERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG 62
+++ ++ S+++VVIF ++C M H +KTLF + GV+ ++E+D+ GK++E+ALA + G
Sbjct: 2 DKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQL-G 60
Query: 63 RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
+P VP VFIGG+LVG +QVMSLHL LVP+L+ GALWL
Sbjct: 61 CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102
>AT4G15690.1 | chr4:8934444-8934752 FORWARD LENGTH=103
Length = 102
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Query: 3 ERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG 62
E + ++ S+++VVIF ++C M H +KTLF + GV+ ++E+D+ G+++E+ALA + G
Sbjct: 2 ENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQL-G 60
Query: 63 RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
+P VP VFIGG+LVG +QVMSLHL LVP+L+ AGALWL
Sbjct: 61 CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102
>AT2G47880.1 | chr2:19605124-19605432 FORWARD LENGTH=103
Length = 102
Score = 107 bits (267), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
Query: 3 ERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG 62
++V R+SS++ VVIF S+C +C+ V+ LF +L V +HE+D DP+ +++E+AL + G
Sbjct: 2 DKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRL-G 60
Query: 63 RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLR 97
+ VPAVF+GGKLVG T++VMSLHL+G LVPL++
Sbjct: 61 CSTAVPAVFVGGKLVGSTNEVMSLHLSGSLVPLIK 95
>AT3G02000.1 | chr3:332512-332922 REVERSE LENGTH=137
Length = 136
Score = 106 bits (264), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 71/106 (66%), Gaps = 5/106 (4%)
Query: 4 RVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGM--- 60
R+ L+S+ AVVIF S C MCH VK LF +GVS AVHE+D P G D++RAL +
Sbjct: 31 RIESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDLHPYGGDIQRALIRLLGC 90
Query: 61 --VGRTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
+P VFIGGKLVG D+VM+ H+ G LVPLL++AGALWL
Sbjct: 91 SGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGALWL 136
>AT5G14070.1 | chr5:4541915-4542337 FORWARD LENGTH=141
Length = 140
Score = 105 bits (262), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 74/108 (68%), Gaps = 7/108 (6%)
Query: 4 RVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMV-- 61
++ ++++ AVVIF S C MCH +K LF +GVS AVHE+D P G ++ RAL ++
Sbjct: 33 KIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLRLLGC 92
Query: 62 ---GRTPP--VPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
G T P +P VFIGGK+VG ++VM+ H+ G LVPLL++AGALWL
Sbjct: 93 SSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140
>AT3G62960.1 | chr3:23268780-23269088 FORWARD LENGTH=103
Length = 102
Score = 103 bits (257), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 3 ERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG 62
++V R+SS++ VVIF S+C +C+ V+ LF +L V +HE+D DP+ +++E+AL + G
Sbjct: 2 DKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRL-G 60
Query: 63 RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLR 97
VPAVF+ GKLVG T+ VMSLHL+G LVPL++
Sbjct: 61 CANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLIK 95
>AT5G18600.1 | chr5:6183466-6183774 REVERSE LENGTH=103
Length = 102
Score = 102 bits (253), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
Query: 3 ERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG 62
+ + ++ +R VVI+ S+C M H +KTL + G + AV+E+D+ G+++E+AL + G
Sbjct: 2 DMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRL-G 60
Query: 63 RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
+P VP VFIGG+LVG ++VMSLHL G L+P+L+ AGALW+
Sbjct: 61 CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102
>AT3G62930.1 | chr3:23261538-23261846 REVERSE LENGTH=103
Length = 102
Score = 94.4 bits (233), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 3 ERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG 62
E V L + VVIF S+C M H ++TL S G V+E+D+ NG+++E+AL M G
Sbjct: 2 ESVRSLVEDKPVVIFSKSSCCMSHSIQTLISGFGAKMTVYELDQFSNGQEIEKALVQM-G 60
Query: 63 RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
P VPAVFIG + +G +QVM+L + +L +LR AGA+W+
Sbjct: 61 CKPSVPAVFIGQQFIGGANQVMTLQVKNQLAAMLRRAGAIWV 102
>AT1G03020.1 | chr1:698207-698515 REVERSE LENGTH=103
Length = 102
Score = 94.4 bits (233), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 3 ERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG 62
E+++ L + VVIF ++C M H +K+L S G + V+E+D+ NG ++ERAL + G
Sbjct: 2 EKISNLLEDKPVVIFSKTSCCMSHSIKSLISGYGANSTVYELDEMSNGPEIERALVEL-G 60
Query: 63 RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
P VPAVFIG +LVG +Q+MSL + +L LLR AGA+W+
Sbjct: 61 CKPTVPAVFIGQELVGGANQLMSLQVRNQLASLLRRAGAIWI 102
>AT1G28480.1 | chr1:10013634-10014047 REVERSE LENGTH=138
Length = 137
Score = 89.0 bits (219), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 2 AERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGK---DVERALA 58
ERV + + AV++ G C MCHVV+ L LGV+ AV E+D++ + ++E
Sbjct: 32 GERVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGV 91
Query: 59 GMVGRTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
G T +PAV++GG+L G D+VM+ H++G+LVP+L+E GALWL
Sbjct: 92 QGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137
>AT4G33040.1 | chr4:15940779-15941213 REVERSE LENGTH=145
Length = 144
Score = 79.0 bits (193), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 64/106 (60%), Gaps = 7/106 (6%)
Query: 4 RVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAV-----HEVDKDPNGKDVERALA 58
++ RL S+ V+IF S+C MCHV+K L + +GV V HEV P ++ +
Sbjct: 41 KIRRLISEHPVIIFSRSSCCMCHVMKRLLATIGVIPTVIELDDHEVSSLPTA--LQDEYS 98
Query: 59 GMVGRTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
G V P PAVFIG + VG + +++LHL+G+LVP L + GALW+
Sbjct: 99 GGVSVVGPPPAVFIGRECVGGLESLVALHLSGQLVPKLVQVGALWV 144
>AT5G63030.1 | chr5:25286352-25287517 FORWARD LENGTH=126
Length = 125
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 4 RVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVGR 63
+ + S VV+F + C C VK L ++LG ++ V E+D+ +G +++ AL+ G+
Sbjct: 21 KAKEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSEWTGQ 80
Query: 64 TPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGAL 102
T VP VFI G +G D+VM + GKLVPLL EAGA+
Sbjct: 81 TT-VPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEAGAI 118
>AT5G11930.1 | chr5:3845165-3845611 REVERSE LENGTH=149
Length = 148
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 11/101 (10%)
Query: 4 RVARLSSQRAVVIFGA-SNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG 62
++ RL S+ V+IF S+C MCHV+K L S +GV V E+D D E A +
Sbjct: 57 KIGRLISEHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEID------DGEIAYLAV-- 108
Query: 63 RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALW 103
P +FIGG VG + +++LHL+G+L+P L E GALW
Sbjct: 109 --EAAPVLFIGGTCVGGFESLVALHLSGQLIPRLVEVGALW 147
>AT5G40370.2 | chr5:16147826-16148900 REVERSE LENGTH=137
Length = 136
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 16 IFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVGRTPPVPAVFIGGK 75
I + C C VK L +LG + E+D + +G ++ LA G+ VP VFIGG
Sbjct: 42 ICSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQ-RTVPNVFIGGN 100
Query: 76 LVGPTDQVMSLHLAGKLVPLLREAGAL 102
+G D +LH GKLVPLL EAGA+
Sbjct: 101 HIGGCDATSNLHKDGKLVPLLTEAGAI 127
>AT5G20500.1 | chr5:6938652-6939665 FORWARD LENGTH=136
Length = 135
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 2 AERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMV 61
A+ V + S +VIF S C C K++F EL V E+D+ +G ++ AL +V
Sbjct: 32 ADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELDEREDGWSIQTALGEIV 91
Query: 62 GRTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAG 100
GR VP VFI GK +G +D + + +G+L LL +G
Sbjct: 92 GRR-TVPQVFINGKHLGGSDDTVDAYESGELAKLLGVSG 129
>AT4G28730.1 | chr4:14199174-14200712 FORWARD LENGTH=175
Length = 174
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 1 MAERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDK-DPNGKDVERALAG 59
M E + + ++ VVI+ + C C VKTLF LGV V E+D+ P G +++ L
Sbjct: 69 MEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLER 128
Query: 60 MVGRTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGA 101
+ G+ VP VF+ GK +G + L+ G L +L EA
Sbjct: 129 LTGQH-TVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAEANG 169
>AT1G77370.1 | chr1:29073916-29074642 FORWARD LENGTH=131
Length = 130
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 14 VVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVGRTPPVPAVFIG 73
+VIF S C C K +FS+L V E+D+ +G ++ L VGR VP VF+
Sbjct: 46 IVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQREDGDQIQYELLEFVGRR-TVPQVFVN 104
Query: 74 GKLVGPTDQVMSLHLAGKLVPLL 96
GK +G +D + + +G+L LL
Sbjct: 105 GKHIGGSDDLGAALESGQLQKLL 127
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,724,979
Number of extensions: 106922
Number of successful extensions: 277
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 256
Number of HSP's successfully gapped: 26
Length of query: 125
Length of database: 11,106,569
Length adjustment: 86
Effective length of query: 39
Effective length of database: 8,748,793
Effective search space: 341202927
Effective search space used: 341202927
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 105 (45.1 bits)