FiT-DB / Search/ Help/ Sample detail

Os01g0932600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : BTB domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.08 (0.0175) R2 : 0.39
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.776 (0.0455) R2dC : 0.389 R2C : 0.385
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0632 (0.0369) R2dN8 : 0.00507 R2N8 : 0.00106
σ : 0.331
deviance : 50.05
__
_____
C
peak time of C : 4.76
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.54 0.299 9.07 0.377 0.713 -0.608 -0.428 0.0265 -0.0252 6.36 5.26 10 -- --
40.5 0.296 9.07 0.375 0.713 -0.609 -0.426 -- -0.0277 6.35 5.26 9 -- --
40.94 0.298 9.07 0.37 0.71 -0.602 -- -0.0263 -0.0262 6.3 5.751 9 -- --
40.94 0.298 9.07 0.369 0.71 -0.6 -- -- -0.0266 6.29 5.82 9 -- --
56.28 0.349 9.04 0.413 -- -0.787 -- 0.737 0.123 -- 0.001284 559 -- --
46.32 0.319 9.07 0.363 0.771 -- -0.298 -- -0.0241 4.82 -- -- -- --
46.55 0.319 9.07 0.364 0.769 -- -- -- -0.0227 4.78 -- -- -- --
57.31 0.353 9.07 0.419 -- -0.772 -- -- 0.0572 -- -10.79 475 -- --
44.54 0.311 9.08 -- 0.719 -0.6 -- -- -0.068 6.28 5.26 9 -- --
77.83 0.412 9.08 0.393 -- -- -- -- -0.00268 -- -- -- -- --
50.05 0.331 9.08 -- 0.776 -- -- -- -0.0632 4.76 -- -- -- --
61.9 0.366 9.08 -- -- -0.757 -- -- 0.00708 -- -9.195 438 -- --
81.91 0.422 9.09 -- -- -- -- -- -0.0463 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 37.61 humidity 90.0 10 < th dose independent rect. 9 7
3 37.80 humidity 50.0 270 > th dose independent rect. 6 21
4 37.85 wind 1.0 30 > th dose independent rect. 4 5
6 38.12 precipitation 0.1 30 < th dose independent rect. 16 17
7 38.12 precipitation 0.1 30 < th dose dependent rect. 16 17
8 38.15 temperature 10.0 270 > th dose dependent rect. 19 8
11 38.18 wind 7.0 10 < th dose independent rect. 9 7
12 38.22 humidity 70.0 270 > th dose independent rect. 17 10
13 38.22 temperature 20.0 30 > th dose independent rect. 9 19
16 38.27 wind 9.0 270 < th dose dependent rect. 7 8
17 38.28 temperature 20.0 270 > th dose independent rect. 20 16
21 38.33 wind 9.0 270 < th dose dependent rect. 6 21
24 38.35 temperature 30.0 270 < th dose independent rect. 17 10
25 38.39 wind 9.0 90 < th dose independent rect. 9 18
30 38.48 wind 1.0 270 > th dose independent rect. 3 15
32 38.48 wind 1.0 270 > th dose independent rect. 13 18
34 38.48 temperature 10.0 270 > th dose dependent rect. 20 16
35 38.49 wind 9.0 90 < th dose dependent rect. 9 18
36 38.50 atmosphere 1005.0 10 > th dose dependent rect. 4 5
39 38.53 radiation 1.0 10 > th dose independent rect. 9 7
41 38.59 wind 1.0 270 > th dose independent rect. 3 3
42 38.60 precipitation 0.1 90 < th dose independent rect. 3 6
45 38.60 precipitation 0.1 90 < th dose dependent rect. 3 6
49 38.62 radiation 1.0 10 > th dose dependent rect. 9 7
53 38.68 temperature 10.0 10 > th dose dependent rect. 9 19
55 38.70 atmosphere 995.0 10 > th dose independent rect. 16 17
58 38.72 wind 9.0 90 < th dose dependent rect. 9 7
60 38.74 radiation 30.0 90 < th dose independent rect. 3 6
63 38.76 wind 5.0 90 < th dose independent rect. 3 6
64 38.77 radiation 40.0 10 < th dose independent rect. 16 17
68 38.79 temperature 10.0 10 > th dose independent rect. 9 7
70 38.79 atmosphere 1015.0 10 < th dose independent rect. 9 7
71 38.79 precipitation 0.1 10 < th dose independent rect. 9 7
72 38.79 temperature 10.0 10 > th dose independent rect. 16 17
74 38.79 precipitation 0.1 10 < th dose dependent rect. 9 7
76 38.80 temperature 30.0 270 < th dose dependent rect. 3 3
78 38.81 temperature 30.0 90 < th dose independent rect. 3 6
90 38.84 wind 9.0 30 < th dose independent rect. 16 17
95 38.86 radiation 1.0 10 > th dose dependent rect. 9 3
109 38.90 temperature 10.0 90 > th dose independent rect. 3 6
111 38.90 humidity 50.0 90 > th dose independent rect. 3 6
113 38.90 atmosphere 995.0 90 > th dose independent rect. 3 6
114 38.90 atmosphere 1015.0 90 < th dose independent rect. 3 6
117 38.90 radiation 10.0 270 < th dose dependent rect. 17 10
121 38.93 precipitation 0.1 270 < th dose independent rect. 3 3
123 38.93 precipitation 0.1 270 < th dose dependent rect. 3 3
126 38.94 wind 9.0 270 < th dose independent rect. 6 21
130 38.96 wind 1.0 270 > th dose independent rect. 1 7
146 39.00 atmosphere 995.0 10 > th dose independent rect. 9 7
152 39.01 temperature 10.0 10 > th dose dependent rect. 9 7
155 39.03 temperature 30.0 270 < th dose dependent rect. 1 6
156 39.04 wind 5.0 270 < th dose independent rect. 3 3
160 39.05 wind 9.0 10 < th dose independent rect. 9 19
163 39.05 radiation 10.0 270 < th dose dependent rect. 3 11
165 39.06 temperature 15.0 270 > th dose independent rect. 7 6
176 39.09 temperature 10.0 1440 > th dose independent rect. 5 5
179 39.09 atmosphere 995.0 1440 > th dose independent rect. 5 5
180 39.09 atmosphere 1015.0 1440 < th dose independent rect. 5 5
181 39.09 wind 7.0 270 < th dose independent rect. 7 6
184 39.09 temperature 10.0 1440 > th dose independent rect. 10 7
188 39.09 temperature 10.0 1440 > th dose independent rect. 17 17
193 39.09 temperature 10.0 1440 > th dose independent rect. 10 19
212 39.14 temperature 20.0 270 > th dose independent rect. 9 1
219 39.15 wind 9.0 270 < th dose dependent rect. 9 1
224 39.17 radiation 1.0 270 < th dose independent rect. 18 9
229 39.19 radiation 30.0 90 < th dose independent rect. 3 8
240 39.21 radiation 20.0 10 < th dose independent rect. 3 23
252 39.25 radiation 20.0 10 < th dose independent rect. 4 16
260 39.25 radiation 40.0 10 < th dose dependent rect. 3 23
268 39.27 temperature 10.0 270 > th dose independent rect. 3 3
270 39.27 temperature 30.0 270 < th dose independent rect. 3 3
271 39.27 humidity 50.0 270 > th dose independent rect. 3 3
274 39.27 atmosphere 995.0 270 > th dose independent rect. 3 3
275 39.27 atmosphere 1015.0 270 < th dose independent rect. 3 3
276 39.27 radiation 20.0 270 < th dose independent rect. 3 3
281 39.27 radiation 40.0 10 < th dose independent rect. 4 16
282 39.27 wind 1.0 10 > th dose independent rect. 16 17
283 39.27 temperature 10.0 270 > th dose independent rect. 6 21
285 39.27 precipitation 0.1 270 < th dose independent rect. 10 23
286 39.27 radiation 20.0 270 < th dose dependent rect. 3 3
293 39.27 precipitation 0.1 270 < th dose dependent rect. 10 23
295 39.28 precipitation 0.1 270 < th dose independent rect. 3 15
297 39.28 precipitation 0.1 270 < th dose dependent rect. 3 15
298 39.29 radiation 1.0 270 > th dose independent rect. 7 7
310 39.31 temperature 20.0 270 > th dose independent rect. 6 21
321 39.32 radiation 20.0 10 < th dose independent rect. 4 18
329 39.34 radiation 30.0 90 < th dose independent rect. 12 21
331 39.35 wind 7.0 10 < th dose independent rect. 9 5
342 39.37 radiation 40.0 90 < th dose independent rect. 4 16
344 39.38 radiation 1.0 270 > th dose independent rect. 9 1
348 39.38 humidity 90.0 10 < th dose independent rect. 2 7
354 39.39 wind 1.0 30 > th dose independent rect. 12 21
364 39.40 precipitation 0.1 90 < th dose independent rect. 9 18
366 39.40 wind 5.0 270 < th dose independent rect. 7 20
370 39.40 precipitation 0.1 90 < th dose dependent rect. 9 18
393 39.43 humidity 50.0 270 > th dose dependent rect. 17 10
396 39.44 radiation 1.0 270 < th dose independent rect. 3 10
448 39.48 radiation 40.0 10 < th dose independent rect. 4 18
474 39.50 temperature 15.0 10 > th dose dependent rect. 20 8
477 39.51 wind 1.0 10 > th dose independent rect. 9 7
495 39.52 radiation 10.0 10 > th dose dependent rect. 13 23
521 39.54 humidity 90.0 10 < th dose dependent rect. 9 7
530 39.55 temperature 20.0 10 > th dose independent rect. 22 16
537 39.56 wind 9.0 270 < th dose independent rect. 18 9
547 39.56 radiation 40.0 10 < th dose dependent rect. 4 16
553 39.57 humidity 90.0 30 < th dose independent rect. 9 3
556 39.57 temperature 10.0 270 > th dose independent rect. 18 9
561 39.57 temperature 10.0 270 > th dose independent rect. 3 15
562 39.57 atmosphere 1015.0 270 < th dose independent rect. 3 15
567 39.58 temperature 20.0 30 > th dose independent rect. 9 3
577 39.59 wind 7.0 30 < th dose independent rect. 9 3
589 39.60 atmosphere 995.0 90 > th dose independent rect. 9 18
594 39.61 wind 7.0 270 < th dose independent rect. 9 1
606 39.61 atmosphere 995.0 270 > th dose independent rect. 18 9
607 39.61 atmosphere 995.0 270 > th dose independent rect. 3 15
624 39.63 temperature 20.0 10 > th dose independent rect. 20 19
636 39.64 wind 1.0 10 > th dose independent rect. 14 19
642 39.65 radiation 30.0 270 < th dose independent rect. 1 8
645 39.65 atmosphere 1015.0 90 < th dose independent rect. 9 18
661 39.66 humidity 90.0 10 < th dose dependent rect. 9 5
663 39.66 temperature 30.0 270 < th dose dependent rect. 23 8
699 39.69 atmosphere 995.0 270 > th dose independent rect. 13 18
713 39.70 wind 9.0 270 < th dose dependent rect. 20 16
728 39.72 precipitation 0.1 270 < th dose independent rect. 6 21
731 39.72 precipitation 0.1 270 < th dose dependent rect. 6 21
732 39.73 radiation 20.0 10 < th dose independent rect. 4 10
745 39.74 humidity 70.0 1440 > th dose independent rect. 10 1
750 39.74 precipitation 0.1 270 < th dose independent rect. 7 6
754 39.74 atmosphere 1005.0 270 > th dose dependent rect. 4 1
757 39.74 precipitation 0.1 270 < th dose dependent rect. 7 6
773 39.75 radiation 40.0 10 < th dose dependent rect. 4 18
781 39.76 atmosphere 995.0 270 > th dose dependent rect. 3 3
793 39.77 temperature 30.0 270 < th dose independent rect. 7 20
816 39.78 atmosphere 1015.0 30 < th dose independent rect. 16 17
824 39.79 atmosphere 995.0 270 > th dose independent rect. 7 6
825 39.79 atmosphere 1015.0 270 < th dose independent rect. 7 6
833 39.79 temperature 10.0 270 > th dose independent rect. 13 18
843 39.80 radiation 40.0 270 < th dose dependent rect. 2 7
851 39.81 precipitation 0.1 30 < th dose independent rect. 12 21
861 39.81 precipitation 0.1 30 < th dose dependent rect. 12 21
868 39.82 precipitation 0.1 270 < th dose independent rect. 1 7
872 39.82 temperature 10.0 10 > th dose dependent rect. 9 5
873 39.82 precipitation 0.1 270 < th dose dependent rect. 1 7
879 39.83 humidity 50.0 10 > th dose independent rect. 16 17
892 39.84 wind 1.0 270 > th dose independent rect. 12 9
894 39.84 wind 7.0 270 < th dose independent rect. 21 15
901 39.85 precipitation 0.1 270 < th dose independent rect. 9 1
905 39.85 precipitation 0.1 270 < th dose dependent rect. 9 1
949 39.89 humidity 70.0 1440 > th dose independent rect. 9 3
964 39.89 wind 9.0 270 < th dose independent rect. 13 18
968 39.90 humidity 90.0 270 < th dose independent rect. 9 1
978 39.90 wind 9.0 90 < th dose dependent rect. 3 6
985 39.91 atmosphere 995.0 270 > th dose independent rect. 9 1
986 39.91 atmosphere 1015.0 270 < th dose independent rect. 9 1
993 39.91 precipitation 0.1 10 < th dose independent rect. 9 18
995 39.91 temperature 10.0 270 > th dose independent rect. 10 23
996 39.91 temperature 10.0 30 > th dose dependent rect. 9 3
1000 39.91 precipitation 0.1 10 < th dose dependent rect. 9 18