Os01g0929100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0929100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.78 | 0.369 | 14.7 | -1.15 | 2.13 | 1.13 | 0.785 | 1.26 | -0.744 | 22.4 | 1.51 | 8616 | -- | -- |
| 63.66 | 0.372 | 14.7 | -1.35 | 2.08 | 1.01 | 0.821 | -- | -0.799 | 22.5 | 1.589 | 8520 | -- | -- |
| 64.05 | 0.373 | 14.7 | -1.15 | 2.13 | 1.13 | -- | 1.33 | -0.747 | 22.4 | 1.5 | 8547 | -- | -- |
| 66.01 | 0.378 | 14.7 | -1.45 | 2.05 | 1.07 | -- | -- | -0.79 | 22.4 | 1.51 | 8520 | -- | -- |
| 164.85 | 0.601 | 14.6 | -1.22 | -- | -1.34 | -- | -0.378 | -0.477 | -- | 1.5 | 8547 | -- | -- |
| 80.66 | 0.421 | 14.6 | -1.23 | 2.16 | -- | 0.831 | -- | -0.525 | 22.5 | -- | -- | -- | -- |
| 83.48 | 0.428 | 14.6 | -1.27 | 2.16 | -- | -- | -- | -0.527 | 22.5 | -- | -- | -- | -- |
| 164.3 | 0.6 | 14.5 | -1.23 | -- | -1.35 | -- | -- | -0.467 | -- | 1.819 | 12593 | -- | -- |
| 104.73 | 0.477 | 14.6 | -- | 2.12 | 0.896 | -- | -- | -0.581 | 22.4 | 8.48 | 9886 | -- | -- |
| 369.62 | 0.898 | 14.6 | -1.23 | -- | -- | -- | -- | -0.519 | -- | -- | -- | -- | -- |
| 125.85 | 0.525 | 14.6 | -- | 2.15 | -- | -- | -- | -0.386 | 22.4 | -- | -- | -- | -- |
| 204.16 | 0.668 | 14.5 | -- | -- | -1.35 | -- | -- | -0.305 | -- | 2.48 | 6774 | -- | -- |
| 409.6 | 0.945 | 14.5 | -- | -- | -- | -- | -- | -0.382 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.02 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 9 | 9 |
| 10 | 59.52 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 7 |
| 21 | 60.55 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 19 | 8 |
| 22 | 60.55 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 26 | 60.66 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 20 | 5 |
| 37 | 60.86 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 50 | 61.08 | temperature | 20.0 | 270 | > th | dose dependent | sin | 21 | NA |
| 59 | 61.15 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 6 | 17 |
| 69 | 61.33 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 85 | 61.47 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 7 | 4 |
| 102 | 61.55 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 19 |
| 104 | 61.57 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 113 | 61.63 | temperature | 20.0 | 720 | > th | dose dependent | sin | 2 | NA |
| 115 | 61.63 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 19 |
| 119 | 61.66 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 131 | 61.70 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 146 | 61.74 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 153 | 61.77 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 158 | 61.79 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 15 |
| 160 | 61.80 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 5 | 13 |
| 162 | 61.81 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 164 | 61.82 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 183 | 61.86 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 15 |
| 208 | 61.98 | temperature | 25.0 | 270 | > th | dose independent | rect. | 10 | 8 |
| 212 | 61.99 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 223 | 62.01 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 9 | 19 |
| 224 | 62.02 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 238 | 62.06 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 261 | 62.11 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 279 | 62.14 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 280 | 62.14 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 316 | 62.21 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 331 | 62.23 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 334 | 62.23 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 343 | 62.23 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 4 |
| 367 | 62.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 384 | 62.29 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 388 | 62.30 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 420 | 62.34 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 7 | 7 |
| 429 | 62.35 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 464 | 62.41 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 471 | 62.42 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 552 | 62.54 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 558 | 62.55 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 587 | 62.57 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 631 | 62.63 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 632 | 62.63 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 640 | 62.64 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 644 | 62.64 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 7 |
| 650 | 62.65 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 681 | 62.68 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 22 |
| 706 | 62.71 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 709 | 62.71 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 718 | 62.72 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 749 | 62.75 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 9 | 3 |
| 778 | 62.79 | humidity | 90.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 815 | 62.82 | wind | 7.0 | 43200 | < th | dose independent | rect. | 6 | 6 |
| 819 | 62.82 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 820 | 62.82 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 5 |
| 829 | 62.83 | radiation | 1.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 841 | 62.84 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 852 | 62.85 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 14 | 14 |
| 866 | 62.86 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 21 | 3 |
| 868 | 62.86 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 6 |
| 877 | 62.87 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 17 | 22 |
| 915 | 62.90 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 928 | 62.91 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 931 | 62.91 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 989 | 62.95 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |