Os01g0926300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Transaldolase (EC 2.2.1.2).
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Os01g0926300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Transaldolase (EC 2.2.1.2).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.88 | 0.345 | 13.5 | 0.647 | 1.52 | -0.595 | 0.943 | -1.4 | 0.293 | 19.7 | 26.1 | 5368 | -- | -- |
| 55.31 | 0.346 | 13.4 | 0.999 | 1.51 | -0.593 | 0.888 | -- | 0.367 | 19.6 | 27.2 | 5429 | -- | -- |
| 56.37 | 0.35 | 13.5 | 0.647 | 1.51 | -0.6 | -- | -1.33 | 0.298 | 19.7 | 26.1 | 5430 | -- | -- |
| 57.43 | 0.353 | 13.4 | 0.963 | 1.51 | -0.589 | -- | -- | 0.372 | 19.7 | 27.54 | 5549 | -- | -- |
| 178.22 | 0.622 | 13.4 | 0.867 | -- | -0.564 | -- | -0.998 | 0.357 | -- | 25.9 | 18711 | -- | -- |
| 67.52 | 0.385 | 13.5 | 0.759 | 1.5 | -- | 0.918 | -- | 0.27 | 19.6 | -- | -- | -- | -- |
| 69.86 | 0.391 | 13.5 | 0.737 | 1.5 | -- | -- | -- | 0.271 | 19.6 | -- | -- | -- | -- |
| 177.13 | 0.62 | 13.4 | 0.945 | -- | -0.592 | -- | -- | 0.355 | -- | 27.91 | 5713 | -- | -- |
| 78.45 | 0.413 | 13.5 | -- | 1.49 | -0.357 | -- | -- | 0.216 | 19.7 | 28.74 | 5527 | -- | -- |
| 190.65 | 0.645 | 13.4 | 0.715 | -- | -- | -- | -- | 0.248 | -- | -- | -- | -- | -- |
| 84.16 | 0.429 | 13.5 | -- | 1.49 | -- | -- | -- | 0.189 | 19.6 | -- | -- | -- | -- |
| 196.24 | 0.652 | 13.5 | -- | -- | -0.397 | -- | -- | 0.115 | -- | 29.85 | 5706 | -- | -- |
| 204.15 | 0.667 | 13.4 | -- | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.65 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 2 | 52.78 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 5 | 52.89 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 22 | 53.18 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 24 | 53.25 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 82 | 53.57 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 90 | 53.60 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 106 | 53.65 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 109 | 53.66 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 135 | 53.73 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 137 | 53.74 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 150 | 53.78 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 165 | 53.81 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 8 |
| 232 | 53.90 | temperature | 25.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 234 | 53.90 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 246 | 53.91 | temperature | 25.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 316 | 53.97 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 326 | 53.97 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 332 | 53.98 | temperature | 30.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 359 | 53.99 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 404 | 54.01 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 2 | 5 |
| 455 | 54.03 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 462 | 54.03 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 10 | 13 |
| 464 | 54.03 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 519 | 54.06 | temperature | 30.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 527 | 54.06 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 10 | 13 |
| 582 | 54.08 | temperature | 20.0 | 43200 | > th | dose dependent | sin | 11 | NA |
| 598 | 54.09 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 601 | 54.09 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 620 | 54.09 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 23 | 13 |
| 634 | 54.09 | temperature | 25.0 | 43200 | < th | dose dependent | sin | 17 | NA |
| 653 | 54.10 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 654 | 54.10 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 4 |
| 656 | 54.10 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 718 | 54.11 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 780 | 54.11 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 18 | 21 |
| 871 | 54.14 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 873 | 54.14 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 918 | 54.14 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 921 | 54.14 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 946 | 54.14 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 14 |