Os01g0926200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to RING-H2 finger protein RHF1a (Fragment).
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Os01g0926200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to RING-H2 finger protein RHF1a (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.55 | 0.347 | 9.58 | 0.185 | 0.637 | 0.109 | -0.0724 | 3.59 | -0.191 | 9.29 | 31.11 | 3697 | -- | -- |
| 53.42 | 0.34 | 9.65 | -0.293 | 0.603 | 0.489 | -0.0413 | -- | -0.188 | 9.18 | 30.4 | 5852 | -- | -- |
| 54.56 | 0.344 | 9.58 | 0.183 | 0.638 | 0.11 | -- | 3.59 | -0.191 | 9.28 | 31.11 | 3696 | -- | -- |
| 53.21 | 0.34 | 9.65 | -0.359 | 0.603 | 0.473 | -- | -- | -0.223 | 9.16 | 30.32 | 5853 | -- | -- |
| 77.38 | 0.41 | 9.56 | 0.535 | -- | -0.166 | -- | 5.03 | -0.198 | -- | 31 | 2923 | -- | -- |
| 64.51 | 0.377 | 9.66 | -0.216 | 0.617 | -- | -0.108 | -- | -0.279 | 9.06 | -- | -- | -- | -- |
| 64.55 | 0.376 | 9.66 | -0.22 | 0.618 | -- | -- | -- | -0.279 | 9.04 | -- | -- | -- | -- |
| 74.24 | 0.401 | 9.67 | -0.372 | -- | 0.478 | -- | -- | -0.244 | -- | 30.4 | 5841 | -- | -- |
| 56.56 | 0.35 | 9.64 | -- | 0.593 | 0.425 | -- | -- | -0.196 | 9.22 | 30.6 | 5864 | -- | -- |
| 86.5 | 0.435 | 9.68 | -0.221 | -- | -- | -- | -- | -0.275 | -- | -- | -- | -- | -- |
| 65.82 | 0.38 | 9.66 | -- | 0.617 | -- | -- | -- | -0.255 | 9.07 | -- | -- | -- | -- |
| 77.61 | 0.41 | 9.66 | -- | -- | 0.441 | -- | -- | -0.189 | -- | 30.59 | 5864 | -- | -- |
| 87.79 | 0.437 | 9.68 | -- | -- | -- | -- | -- | -0.251 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.53 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 2 | 53.89 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 3 | 53.92 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 7 | 53.94 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 10 | 53.94 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 11 |
| 11 | 53.95 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 14 | 53.96 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 25 | 53.96 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 16 |
| 30 | 53.97 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 72 | 54.22 | temperature | 30.0 | 1440 | > th | dose independent | sin | 7 | NA |
| 74 | 54.22 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 80 | 54.24 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 118 | 54.30 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 133 | 54.43 | temperature | 30.0 | 1440 | < th | dose independent | sin | 7 | NA |
| 168 | 54.55 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 8 | 5 |
| 287 | 54.67 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 324 | 54.79 | temperature | 30.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 338 | 54.84 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 339 | 54.85 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 429 | 54.95 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 443 | 54.95 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 22 |
| 543 | 54.99 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 635 | 55.07 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 713 | 55.10 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 22 |
| 786 | 55.13 | temperature | 30.0 | 4320 | > th | dose dependent | no | NA | NA |