Os01g0921200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Alpha-glucosidase I.
FiT-DB / Search/ Help/ Sample detail
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Os01g0921200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Alpha-glucosidase I.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 272.06 | 0.775 | 3.13 | 0.328 | 0.0969 | 0.366 | 0.387 | 2.94 | 0.00624 | 9.16 | 78.35 | 3949 | -- | -- |
| 279.06 | 0.778 | 3.14 | 0.163 | 0.123 | 0.478 | 0.123 | -- | -0.119 | 8.91 | 87 | 6801 | -- | -- |
| 272.49 | 0.769 | 3.13 | 0.328 | 0.0927 | 0.396 | -- | 2.8 | -0.00732 | 8.8 | 78.45 | 3999 | -- | -- |
| 278.12 | 0.777 | 3.16 | 0.0929 | 0.149 | 0.734 | -- | -- | -0.253 | 7.87 | 81.65 | 4809 | -- | -- |
| 272.98 | 0.77 | 3.13 | 0.337 | -- | 0.373 | -- | 2.82 | -0.00129 | -- | 78.41 | 3999 | -- | -- |
| 283.22 | 0.789 | 3.1 | 0.038 | 0.0761 | -- | 0.151 | -- | 0.0329 | 6.83 | -- | -- | -- | -- |
| 283.27 | 0.788 | 3.1 | 0.0408 | 0.0765 | -- | -- | -- | 0.0325 | 7.07 | -- | -- | -- | -- |
| 278.78 | 0.778 | 3.16 | 0.0887 | -- | 0.647 | -- | -- | -0.212 | -- | 82 | 4458 | -- | -- |
| 278.03 | 0.777 | 3.16 | -- | 0.167 | 0.692 | -- | -- | -0.254 | 6.23 | 81.41 | 4785 | -- | -- |
| 283.58 | 0.787 | 3.1 | 0.0423 | -- | -- | -- | -- | 0.0339 | -- | -- | -- | -- | -- |
| 283.32 | 0.787 | 3.1 | -- | 0.077 | -- | -- | -- | 0.028 | 7.03 | -- | -- | -- | -- |
| 278.96 | 0.778 | 3.16 | -- | -- | 0.633 | -- | -- | -0.221 | -- | 81.17 | 4471 | -- | -- |
| 283.63 | 0.786 | 3.1 | -- | -- | -- | -- | -- | 0.0292 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 262.23 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 4 | 264.60 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 9 | 8 |
| 17 | 266.33 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 18 | 266.33 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 21 | 266.40 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 43 | 266.61 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 12 | 4 |
| 45 | 266.65 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 58 | 267.34 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 3 | 5 |
| 59 | 267.41 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 3 | 5 |
| 65 | 268.00 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 3 | 5 |
| 72 | 268.31 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 20 | 12 |
| 73 | 268.35 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 20 | 12 |
| 81 | 268.63 | temperature | 20.0 | 90 | < th | dose independent | rect. | 12 | 4 |
| 84 | 268.75 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 87 | 268.87 | humidity | 80.0 | 4320 | < th | dose independent | sin | 10 | NA |
| 88 | 268.88 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 21 | 12 |
| 89 | 268.90 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 98 | 269.06 | humidity | 80.0 | 4320 | > th | dose independent | sin | 10 | NA |
| 101 | 269.11 | wind | 1.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 117 | 269.35 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 154 | 269.82 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 10 | NA |
| 186 | 270.16 | radiation | 1.0 | 10 | < th | dose independent | rect. | 15 | 2 |
| 234 | 270.53 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 4 | 4 |
| 301 | 271.12 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 21 | 12 |
| 304 | 271.14 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 341 | 271.33 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 10 | NA |
| 411 | 271.61 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 22 | 2 |
| 418 | 271.68 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 488 | 271.90 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 2 |
| 612 | 272.21 | atmosphere | 1010.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 684 | 272.37 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 728 | 272.49 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 746 | 272.53 | temperature | 20.0 | 90 | < th | dose independent | rect. | 8 | 8 |
| 789 | 272.62 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 816 | 272.68 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 817 | 272.68 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 820 | 272.68 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 824 | 272.68 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 833 | 272.68 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 834 | 272.68 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 854 | 272.68 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 859 | 272.68 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 891 | 272.75 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 897 | 272.76 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 903 | 272.76 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 930 | 272.83 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 959 | 272.91 | humidity | 80.0 | 4320 | < th | dose independent | no | NA | NA |
| 972 | 272.93 | wind | 7.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 977 | 272.94 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 992 | 272.96 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 994 | 272.96 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 995 | 272.96 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 999 | 272.96 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |