BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0921200 Os01g0921200|Os01g0921200
(967 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G67490.1 | chr1:25280633-25286581 REVERSE LENGTH=853 991 0.0
AT1G24320.1 | chr1:8626437-8630935 REVERSE LENGTH=790 939 0.0
>AT1G67490.1 | chr1:25280633-25286581 REVERSE LENGTH=853
Length = 852
Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/789 (58%), Positives = 602/789 (76%), Gaps = 23/789 (2%)
Query: 102 RSVTPLDAPRMMDLPQFQGDHKESLYWGTYRPNVYLGIRARTPLSLIAGIMWIGAKNGQY 161
R +TP AP++MDL FQG+HKESLYWGTYRP+VY G+RARTPLSL+AG+MW+G K+ Y
Sbjct: 85 RVITPFPAPKVMDLSMFQGEHKESLYWGTYRPHVYFGVRARTPLSLVAGLMWLGVKDEMY 144
Query: 162 FLRHVCQDSDELSTYGWTDHNGRDYGHQVLVDHGLLLTTSFLKEKGEGSGYGGDWAVRLN 221
+RH C++SD+LST+GW +HNGRDYG Q LV++ +++ TSF+K KG+G GYGGDWAVR++
Sbjct: 145 VMRHFCENSDDLSTFGWREHNGRDYGRQELVENDMVIETSFVKSKGDGLGYGGDWAVRID 204
Query: 222 AKTDGPSLSEDQESTTHLFFYIADEAGNSITMDSHIPSSRGHVLLASGSREEIGDWKVYL 281
K G L++D + + HLFFY+ADE GN + + +G LL SGSRE++GDW+++L
Sbjct: 205 VKNKG--LNDDVKRSAHLFFYLADEGGNVLNLGQDGLDFQGSSLLVSGSREDVGDWQIHL 262
Query: 282 RSEENLEIHRAGFKSISMHNLSDLVQQALATNAMQSGNLNLPDMAEDSSNVIVYQVSMKR 341
+S+ LE H +GFK+ ++NLSDLVQQ LA A + G L L D +EDSSN+ ++Q+S +
Sbjct: 263 KSQNQLETHYSGFKTPHIYNLSDLVQQNLALQARKFGRLQLSDTSEDSSNIYIFQISGRL 322
Query: 342 SAEVDIVFLSGAASENPMIEERINRLTGPVLSTRLESKQKDFEKRYDQIFNANNKINPKE 401
+DI F+SG E+ +E+R+ LTG LS L+ K ++F+ ++++ F + K + +
Sbjct: 323 PFTIDIPFISGIKGESSNVEKRLTSLTGLPLSDLLKKKHQEFDAKFNECFKLSEKHDSET 382
Query: 402 LSVGVAALSNLLGGIGYFYGQSKIALPKGFTAITHHTQTKSNASRVSLQQKNGDKYIPYW 461
L VG A++N+LGGIGYFYGQSKI +PK S Q + D ++ YW
Sbjct: 383 LGVGRTAIANMLGGIGYFYGQSKIYVPK------------------STQPGSRDNFLLYW 424
Query: 462 PAALYTAVPSRSFFPRGFLWDEGFHQLVIWRWDVHISMDIIGHWLDLINADGWIPREQIL 521
PA LYTAVPSR FFPRGFLWDEGFHQL+IWRWD+ I++DI+GHWLDL+N DGWIPREQIL
Sbjct: 425 PAELYTAVPSRPFFPRGFLWDEGFHQLLIWRWDIRITLDIVGHWLDLLNIDGWIPREQIL 484
Query: 522 GAEALSKVPEEFVLQYPSNGNPPTLFLALRDLASGIHANQFSDEESEKISTFLKRAYVRL 581
GAEALSKVPEEFV+QYPSNGNPPTLFL +RDL I +F E +++ +FL+RA VRL
Sbjct: 485 GAEALSKVPEEFVVQYPSNGNPPTLFLVIRDLIDAIRMEKFVASEKDEVLSFLERASVRL 544
Query: 582 NSWFQWFNSTQTGKYEGTFYWHGRDSMATRELNPKTLTSGLDDYPRASHPNDEERHVDLR 641
++WFQWFN++Q GK G+++WHGRD+ T+ELNPKTL+SGLDDYPRASHP+++ERHVDLR
Sbjct: 545 DAWFQWFNTSQKGKEIGSYFWHGRDNTTTQELNPKTLSSGLDDYPRASHPSEDERHVDLR 604
Query: 642 CWMLLATNCMCSIAEFLKTDSSLEKDYYKMSNQ-LSDFGILNKMHLDDKTGAYFDYGNHT 700
CWM LA +CM SI E L + L K+ Y + + LS+F +LN+MH D GAYFD+GNHT
Sbjct: 605 CWMYLAADCMHSITELLGKEDKLSKENYNSTVKLLSNFNLLNQMHYDSDYGAYFDFGNHT 664
Query: 701 EKVRLRWYEV-RENDVMRRELLRETLQPPQLQLVPHVGYVSMFPFMMGAIPPESWVLEKQ 759
EKV+L W EV +EN + R+L+R+T P+L+LVPH+GYVS FPFM IPP+S +LEKQ
Sbjct: 665 EKVKLIWKEVIQENGQLSRQLVRKTFGKPKLKLVPHLGYVSFFPFMSRIIPPDSPILEKQ 724
Query: 760 LDLISNSSILWTNYGLRSLSRTSSIYMKRNTEHDPPYWRGAIWINMNYMILSGLHHYAHE 819
LDLISN SILW++YGL SL++TSS+YMKRNTEHD PYWRG IW+NMNYMILS L+HY+
Sbjct: 725 LDLISNRSILWSDYGLVSLAKTSSMYMKRNTEHDAPYWRGPIWMNMNYMILSSLYHYSIV 784
Query: 820 DGPYKDRAKELYDELRSNLIRNIVKNYHETGFFWENYDQKNKGKGKGARSFTGWTSLVVL 879
DGPY++++K +Y ELRSNLIRN+V+NY+ETG+ WE YDQ KG GKG R FTGW++L +L
Sbjct: 785 DGPYREKSKAIYTELRSNLIRNVVRNYYETGYIWEQYDQV-KGTGKGTRLFTGWSALTLL 843
Query: 880 IMGESYPTL 888
IM E YP
Sbjct: 844 IMSEDYPIF 852
>AT1G24320.1 | chr1:8626437-8630935 REVERSE LENGTH=790
Length = 789
Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/788 (55%), Positives = 591/788 (75%), Gaps = 25/788 (3%)
Query: 102 RSVTPLDAPRMMDLPQFQGDHKESLYWGTYRPNVYLGIRARTPLSLIAGIMWIGAKNGQY 161
R +TP +P++ DL FQG+HKESLYWGTYRP +Y G+RARTP SL+AG+MW+ K+G+
Sbjct: 22 RVITPFPSPKLTDLSMFQGEHKESLYWGTYRPQMYFGVRARTPKSLVAGLMWLVMKDGKP 81
Query: 162 FLRHVCQDSDELSTYGWTDHNGRDYGHQVLVDHGLLLTTSFLKEKGEGSGYGGDWAVRLN 221
+RH C++S++L ++GW +HNGRD+G Q L + ++L TSF+K + GYGGDW++R+N
Sbjct: 82 VMRHFCENSNDLKSFGWKEHNGRDFGRQELFEQNMVLETSFVKSEEGSLGYGGDWSIRIN 141
Query: 222 AKTDGPSLSEDQ-ESTTHLFFYIADEAGNSITMDSHIPSSRGHVLLASGSREEIGDWKVY 280
+ L++D+ + +THLFFY+ADE N + + + + +LASGSR+++G+W+++
Sbjct: 142 VQN---MLNDDEVKRSTHLFFYLADEGCNGVNLGKDVLRLKESSVLASGSRQDVGNWQMH 198
Query: 281 LRSEENLEIHRAGFKSISMHNLSDLVQQALATNAMQSGNLNLPDMAEDSSNVIVYQVSMK 340
L+S+ +LE H GFK+ + NLS LVQQ L +SG L L D +EDSSN+ V+Q+S
Sbjct: 199 LKSQNHLETHYCGFKTPDIVNLSGLVQQNLTAQEEKSGLLQLSDSSEDSSNIYVFQISTT 258
Query: 341 RSAEVDIVFLSGAASENPMIEERINRLTGPVLSTRLESKQKDFEKRYDQIFNANNKINPK 400
+ +DI F+SG E +E RI LTG LS+ LE K F ++++ FN ++K++P+
Sbjct: 259 NQSTIDIAFVSGIKEETSNMENRIMSLTGLPLSSLLEEKHIAFNAKFNECFNLSDKLDPE 318
Query: 401 ELSVGVAALSNLLGGIGYFYGQSKIALPKGFTAITHHTQTKSNASRVSLQQKNGDKYIPY 460
L VG AA+ N+LGGIGYFYGQSKI PK A K+ D ++ Y
Sbjct: 319 TLVVGKAAIGNMLGGIGYFYGQSKIHFPKSPLA------------------KSEDDFLLY 360
Query: 461 WPAALYTAVPSRSFFPRGFLWDEGFHQLVIWRWDVHISMDIIGHWLDLINADGWIPREQI 520
WPA LYTAVPSR FPRGFLWDEGFHQL+IWRWDVHI+++I+G+WLDL+N DGWIPREQ+
Sbjct: 361 WPAELYTAVPSRPRFPRGFLWDEGFHQLLIWRWDVHITLEIVGNWLDLMNIDGWIPREQV 420
Query: 521 LGAEALSKVPEEFVLQYPSNGNPPTLFLALRDLASGIHANQFSDEESEKISTFLKRAYVR 580
LGAEALSK+P+++V+Q+PSNGNPPTL L +RDL +GI +F++ + +KI +FL RA+VR
Sbjct: 421 LGAEALSKIPKQYVVQFPSNGNPPTLLLVIRDLINGIRTEKFNEADRDKILSFLDRAFVR 480
Query: 581 LNSWFQWFNSTQTGKYEGTFYWHGRDSMATRELNPKTLTSGLDDYPRASHPNDEERHVDL 640
L++WF+WFN++Q GK +G++YWHGRD++ RELNP++L+SGLDDYPRASHPN++ERHVDL
Sbjct: 481 LDAWFKWFNTSQIGKEKGSYYWHGRDNITNRELNPQSLSSGLDDYPRASHPNEDERHVDL 540
Query: 641 RCWMLLATNCMCSIAEFL-KTDSSLEKDYYKMSNQLSDFGILNKMHLDDKTGAYFDYGNH 699
RCWM LA + M SI EF+ K D + +DY ++ LSDF +LN+MH D GAY D+GNH
Sbjct: 541 RCWMYLAADSMNSIQEFMGKNDILVTEDYSSIAKLLSDFTLLNQMHYDKDHGAYLDFGNH 600
Query: 700 TEKVRLRWYEV-RENDVMRRELLRETLQPPQLQLVPHVGYVSMFPFMMGAIPPESWVLEK 758
TE+VRL W EV E+ + REL+RET P+L+LVPH+GYVS FPFM IP +S +L+K
Sbjct: 601 TEEVRLVWKEVIHEDGHLSRELVRETYGKPELRLVPHIGYVSFFPFMFRIIPADSSILDK 660
Query: 759 QLDLISNSSILWTNYGLRSLSRTSSIYMKRNTEHDPPYWRGAIWINMNYMILSGLHHYAH 818
QLDLISN +I+W++YGL SL++TSS+YMK N+EH PYWRGAIW+NMNYMILS LHHY+
Sbjct: 661 QLDLISNGNIVWSDYGLLSLAKTSSLYMKYNSEHQAPYWRGAIWMNMNYMILSSLHHYST 720
Query: 819 EDGPYKDRAKELYDELRSNLIRNIVKNYHETGFFWENYDQKNKGKGKGARSFTGWTSLVV 878
DGPY +A+ +Y+ELRSNLIRN+V+NY +TG WE+YDQ KG G+GAR FTGW++L++
Sbjct: 721 VDGPYNSKARTIYEELRSNLIRNVVRNYDQTGIIWEHYDQ-TKGTGEGARVFTGWSALIL 779
Query: 879 LIMGESYP 886
LIM E YP
Sbjct: 780 LIMSEEYP 787
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 21,435,447
Number of extensions: 962387
Number of successful extensions: 1995
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1985
Number of HSP's successfully gapped: 2
Length of query: 967
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 859
Effective length of database: 8,145,641
Effective search space: 6997105619
Effective search space used: 6997105619
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 117 (49.7 bits)