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Os01g0920000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : CBS domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.013) R2 : 0.631
β1 : 1.26 (0.0476) R2dD : 0.591 R2D : 0.43
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.378 (0.0278) R2dN8 : 0.201 R2N8 : 0.0402
σ : 0.244
deviance : 27.28
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.68 0.203 12.3 1.23 0.599 -0.333 -0.387 0.00714 0.348 1.7 5.821 7 -- --
18.51 0.202 12.3 1.23 0.597 -0.336 -0.376 -- 0.349 1.66 5.817 5 -- --
18.68 0.203 12.2 1.24 0.584 -0.323 -- -0.248 0.35 1.71 5.231 2 -- --
19.07 0.205 12.2 1.24 0.588 -0.326 -- -- 0.349 1.7 5.231 2 -- --
25.51 0.237 12.2 1.25 -- 0.219 -- -0.338 0.376 -- 69.09 2 -- --
20.89 0.214 12.2 1.25 0.336 -- -0.323 -- 0.367 3.97 -- -- -- --
21.17 0.215 12.2 1.25 0.336 -- -- -- 0.369 4.16 -- -- -- --
21.13 0.214 12.2 1.27 -- 0.41 -- -- 0.405 -- 73.7 362 -- --
59.11 0.36 12.3 -- 0.663 -0.376 -- -- 0.221 1.55 1.27 2 -- --
27.28 0.244 12.2 1.26 -- -- -- -- 0.378 -- -- -- -- --
62.34 0.369 12.3 -- 0.36 -- -- -- 0.23 4.1 -- -- -- --
63.83 0.372 12.3 -- -- 0.394 -- -- 0.261 -- 93.96 314 -- --
69.38 0.389 12.3 -- -- -- -- -- 0.238 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 14.98 wind 5.0 270 < th dose independent rect. 23 3
2 14.98 temperature 10.0 270 > th dose dependent rect. 23 3
3 14.99 wind 5.0 270 < th dose independent rect. 22 5
4 14.99 wind 9.0 270 < th dose dependent rect. 22 5
5 15.01 temperature 10.0 270 > th dose dependent rect. 22 5
6 15.15 wind 9.0 270 < th dose dependent rect. 23 3
10 15.21 precipitation 0.1 270 < th dose independent rect. 22 5
11 15.21 temperature 15.0 270 > th dose independent rect. 7 11
12 15.21 precipitation 0.1 270 < th dose dependent rect. 22 5
16 15.26 temperature 10.0 270 > th dose independent rect. 22 5
17 15.26 temperature 30.0 270 < th dose independent rect. 22 5
18 15.26 humidity 50.0 270 > th dose independent rect. 22 5
21 15.26 atmosphere 995.0 270 > th dose independent rect. 22 5
22 15.26 radiation 1.0 270 < th dose independent rect. 22 5
27 15.26 temperature 10.0 270 > th dose independent rect. 3 19
28 15.26 radiation 1.0 270 < th dose dependent rect. 22 5
33 15.28 precipitation 0.1 270 < th dose independent rect. 23 3
34 15.28 precipitation 0.1 270 < th dose dependent rect. 23 3
39 15.31 temperature 10.0 270 > th dose independent rect. 23 3
40 15.31 temperature 30.0 270 < th dose independent rect. 23 3
41 15.31 humidity 50.0 270 > th dose independent rect. 23 3
44 15.31 atmosphere 995.0 270 > th dose independent rect. 23 3
45 15.31 radiation 1.0 270 < th dose independent rect. 23 3
50 15.31 temperature 10.0 270 > th dose independent rect. 2 21
51 15.31 radiation 1.0 270 < th dose dependent rect. 23 3
58 15.33 precipitation 0.1 90 < th dose independent rect. 5 18
60 15.33 precipitation 0.1 90 < th dose dependent rect. 5 18
70 15.43 atmosphere 995.0 270 > th dose independent rect. 3 19
83 15.44 temperature 10.0 90 > th dose independent rect. 5 18
91 15.46 precipitation 0.1 270 < th dose independent rect. 3 19
93 15.46 precipitation 0.1 270 < th dose dependent rect. 3 19
95 15.48 atmosphere 1015.0 270 < th dose independent rect. 23 3
115 15.51 temperature 15.0 90 > th dose independent rect. 9 20
118 15.55 atmosphere 1015.0 270 < th dose independent rect. 3 19
119 15.57 atmosphere 1015.0 90 < th dose independent rect. 5 18
122 15.58 atmosphere 1015.0 270 < th dose independent rect. 22 5
123 15.58 wind 9.0 270 < th dose independent rect. 3 19
125 15.60 wind 9.0 10 < th dose dependent rect. 24 5
127 15.63 wind 9.0 270 < th dose independent rect. 7 11
131 15.66 atmosphere 995.0 270 > th dose independent rect. 2 21
132 15.66 humidity 50.0 90 > th dose dependent rect. 5 6
133 15.67 wind 9.0 90 < th dose independent rect. 9 20
134 15.67 precipitation 0.1 270 < th dose independent rect. 2 21
135 15.67 precipitation 0.1 270 < th dose dependent rect. 2 21
138 15.70 atmosphere 995.0 90 > th dose independent rect. 5 18
143 15.71 humidity 50.0 270 > th dose dependent rect. 3 8
145 15.73 wind 1.0 270 > th dose independent rect. 23 3
147 15.73 wind 9.0 270 < th dose independent rect. 2 21
152 15.74 temperature 15.0 270 > th dose independent rect. 7 21
157 15.76 wind 5.0 270 < th dose independent rect. 24 1
169 15.78 wind 9.0 270 < th dose independent rect. 9 18
183 15.79 wind 9.0 90 < th dose independent rect. 5 18
185 15.79 wind 9.0 270 < th dose independent rect. 6 23
191 15.79 radiation 1.0 10 < th dose dependent rect. 24 16
196 15.80 atmosphere 995.0 270 > th dose independent rect. 18 13
198 15.80 wind 9.0 270 < th dose independent rect. 7 21
201 15.81 temperature 15.0 270 > th dose independent rect. 9 18
202 15.81 humidity 50.0 270 > th dose dependent rect. 23 3
219 15.82 radiation 20.0 270 < th dose independent rect. 18 14
230 15.83 radiation 1.0 10 < th dose dependent rect. 24 14
234 15.84 humidity 50.0 270 > th dose dependent rect. 22 5
245 15.86 atmosphere 1015.0 270 < th dose independent rect. 7 11
246 15.86 temperature 10.0 270 > th dose independent rect. 18 13
247 15.86 humidity 50.0 270 > th dose independent rect. 18 13
252 15.87 radiation 1.0 10 < th dose dependent rect. 24 12
254 15.88 temperature 30.0 90 < th dose independent rect. 5 4
256 15.88 temperature 30.0 90 < th dose independent rect. 5 6
259 15.89 radiation 40.0 90 < th dose independent rect. 5 6
261 15.89 wind 9.0 270 < th dose independent rect. 18 13
266 15.90 temperature 30.0 270 < th dose independent rect. 3 6
270 15.90 temperature 15.0 270 > th dose independent rect. 23 14
272 15.91 wind 7.0 90 < th dose independent rect. 5 4
273 15.91 precipitation 0.1 90 < th dose independent rect. 5 4
274 15.91 precipitation 0.1 90 < th dose dependent rect. 5 4
278 15.92 temperature 10.0 90 > th dose independent rect. 5 4
280 15.92 humidity 50.0 90 > th dose independent rect. 5 4
281 15.92 atmosphere 995.0 90 > th dose independent rect. 5 4
282 15.92 atmosphere 1015.0 90 < th dose independent rect. 5 4
283 15.92 precipitation 0.1 270 < th dose independent rect. 9 18
291 15.92 precipitation 0.1 270 < th dose dependent rect. 9 18
294 15.93 precipitation 0.1 270 < th dose independent rect. 7 21
296 15.93 precipitation 0.1 270 < th dose dependent rect. 7 21
312 15.96 humidity 60.0 270 > th dose independent rect. 3 6
324 15.97 radiation 30.0 270 < th dose independent rect. 4 3
327 15.97 wind 9.0 270 < th dose independent rect. 3 6
329 15.97 temperature 10.0 270 > th dose independent rect. 3 6
337 15.97 atmosphere 995.0 270 > th dose independent rect. 3 6
339 15.97 atmosphere 1015.0 270 < th dose independent rect. 3 6
360 15.98 wind 9.0 270 < th dose dependent rect. 24 1
364 15.99 radiation 30.0 270 < th dose independent rect. 3 6
365 15.99 radiation 30.0 270 < th dose dependent rect. 5 1
383 16.00 radiation 40.0 270 < th dose dependent rect. 4 5
390 16.01 wind 7.0 270 < th dose independent rect. 5 1
392 16.01 temperature 10.0 270 > th dose independent rect. 5 1
394 16.01 temperature 30.0 270 < th dose independent rect. 5 1
395 16.01 humidity 50.0 270 > th dose independent rect. 5 1
398 16.01 atmosphere 995.0 270 > th dose independent rect. 5 1
399 16.01 atmosphere 1015.0 270 < th dose independent rect. 5 1
400 16.01 radiation 20.0 270 < th dose independent rect. 5 1
403 16.01 precipitation 0.1 270 < th dose independent rect. 5 1
408 16.01 temperature 10.0 270 > th dose independent rect. 6 23
409 16.01 precipitation 0.1 270 < th dose dependent rect. 5 1
421 16.03 precipitation 0.1 270 < th dose independent rect. 3 6
422 16.03 wind 9.0 90 < th dose independent rect. 11 18
423 16.03 precipitation 0.1 270 < th dose dependent rect. 3 6
427 16.04 precipitation 0.1 270 < th dose independent rect. 24 1
428 16.04 precipitation 0.1 270 < th dose dependent rect. 24 1
435 16.05 temperature 10.0 270 > th dose independent rect. 24 1
437 16.05 temperature 30.0 270 < th dose independent rect. 24 1
438 16.05 humidity 50.0 270 > th dose independent rect. 24 1
441 16.05 atmosphere 995.0 270 > th dose independent rect. 24 1
442 16.05 atmosphere 1010.0 270 < th dose independent rect. 24 1
444 16.05 radiation 1.0 270 < th dose independent rect. 24 1
453 16.05 temperature 10.0 270 > th dose independent rect. 1 23
454 16.05 radiation 1.0 270 < th dose dependent rect. 24 1
463 16.06 radiation 1.0 10 < th dose independent rect. 24 14
469 16.06 wind 9.0 90 < th dose dependent rect. 5 4
501 16.08 radiation 1.0 90 < th dose dependent rect. 23 8
508 16.09 radiation 1.0 90 < th dose dependent rect. 23 11
540 16.10 precipitation 0.1 270 < th dose independent rect. 7 11
541 16.10 radiation 1.0 10 < th dose independent rect. 24 12
547 16.10 radiation 40.0 90 < th dose independent rect. 5 19
560 16.10 precipitation 0.1 270 < th dose dependent rect. 7 11
567 16.11 temperature 15.0 90 > th dose independent rect. 11 18
569 16.11 radiation 1.0 10 < th dose dependent sin 5 NA
610 16.14 wind 1.0 270 > th dose independent rect. 24 1
632 16.14 radiation 40.0 270 < th dose dependent rect. 18 14
638 16.15 humidity 50.0 270 > th dose dependent rect. 5 1
658 16.18 wind 9.0 270 < th dose independent rect. 23 14
670 16.20 radiation 1.0 90 < th dose dependent sin 8 NA
673 16.20 atmosphere 995.0 30 > th dose dependent rect. 24 5
684 16.22 atmosphere 995.0 270 > th dose dependent rect. 23 3
689 16.24 wind 1.0 90 > th dose independent rect. 5 4
690 16.24 humidity 50.0 90 > th dose independent rect. 5 6
696 16.25 temperature 10.0 1440 > th dose independent rect. 1 5
699 16.25 temperature 30.0 1440 < th dose independent rect. 1 5
703 16.25 humidity 50.0 1440 > th dose independent rect. 1 5
712 16.25 atmosphere 995.0 1440 > th dose independent rect. 1 5
713 16.25 radiation 20.0 1440 < th dose independent rect. 1 5
722 16.25 temperature 10.0 90 > th dose independent rect. 5 6
723 16.25 atmosphere 995.0 90 > th dose independent rect. 5 6
724 16.25 atmosphere 1015.0 90 < th dose independent rect. 5 6
727 16.25 temperature 10.0 1440 > th dose independent rect. 6 19
736 16.26 precipitation 0.1 90 < th dose independent rect. 5 6
740 16.26 wind 9.0 270 < th dose dependent rect. 5 1
743 16.26 precipitation 0.1 90 < th dose dependent rect. 5 6
745 16.27 humidity 70.0 90 > th dose independent rect. 5 6
757 16.28 atmosphere 995.0 270 > th dose dependent rect. 5 1
793 16.30 temperature 10.0 90 > th dose dependent rect. 5 4
794 16.30 atmosphere 995.0 90 > th dose dependent rect. 5 4
800 16.31 wind 9.0 90 < th dose independent rect. 5 6
809 16.32 radiation 1.0 10 > th dose independent sin 6 NA
813 16.32 atmosphere 995.0 270 > th dose dependent rect. 24 1
859 16.34 radiation 1.0 90 < th dose independent rect. 23 8
886 16.36 humidity 90.0 270 < th dose independent rect. 8 9
898 16.38 radiation 1.0 90 > th dose independent sin 8 NA
903 16.39 wind 1.0 270 > th dose independent rect. 5 1
905 16.39 wind 1.0 270 > th dose independent rect. 3 6
907 16.39 temperature 10.0 270 > th dose dependent rect. 5 1
917 16.40 radiation 1.0 90 < th dose independent rect. 23 16
923 16.40 temperature 10.0 90 > th dose dependent rect. 9 20
927 16.41 wind 1.0 270 > th dose independent rect. 3 19
930 16.41 humidity 50.0 270 > th dose dependent rect. 24 1
956 16.44 radiation 1.0 90 < th dose independent rect. 23 11
972 16.45 atmosphere 1015.0 90 < th dose independent rect. 9 20
978 16.46 precipitation 0.1 270 < th dose independent rect. 23 14
981 16.46 precipitation 0.1 270 < th dose dependent rect. 23 14
997 16.47 radiation 40.0 10 < th dose independent rect. 5 19
999 16.47 radiation 1.0 270 < th dose independent rect. 3 20