BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0920000 Os01g0920000|AK069967
         (384 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G65320.1  | chr1:24260168-24262644 REVERSE LENGTH=426          363   e-101
AT5G53750.1  | chr5:21817416-21818723 FORWARD LENGTH=409           80   1e-15
AT4G27460.1  | chr4:13732939-13734263 FORWARD LENGTH=392           73   2e-13

>AT1G65320.1 | chr1:24260168-24262644 REVERSE LENGTH=426
          Length = 425

 Score =  363 bits (933), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 214/411 (52%), Positives = 271/411 (65%), Gaps = 41/411 (9%)

Query: 1   MAAVFFHHVVGDLTVGKPEVVELHDTDT--------------------PRAAPDEPP--- 37
           MA+VF +HVVGDLTVGKPE+VE ++T+T                     R  P  P    
Sbjct: 1   MASVFLYHVVGDLTVGKPEMVEFYETETVESAIRAIGESTECGIPVWRKRTTPSLPGFVE 60

Query: 38  ----SGARFLGMISALDIATFVAASGV--GDRAMAAVVGEVVQPNPGLLREVDPGTRLID 91
                  RF+G++++LDI  F+A +     ++AM   V EVV P+  LL++VDPGTRLID
Sbjct: 61  NSEMRQQRFVGILNSLDIVAFLAKTECLQEEKAMKIPVSEVVSPDNTLLKQVDPGTRLID 120

Query: 92  ALDLMKQGVKRFLVRKNGAWRGISKRFSVLYNGKWLKNMEAXXXXXXXXXXX----XXXX 147
           AL++MKQGV+R LV K+  WRG+SKRFS+LYNGKWLKN E                    
Sbjct: 121 ALEMMKQGVRRLLVPKSVVWRGMSKRFSILYNGKWLKNSENSSSSSGLSADSTNRPTTSM 180

Query: 148 XXXXYKFCCLSREDILRFLIGCLGALAPIPLSPISSLGAINPHYCHVDASVPAMEAIQKV 207
                KFCCLSRED++RFLIG LGALAP+PL+ IS+LG IN +Y  ++AS+PA+EA ++ 
Sbjct: 181 TSSRDKFCCLSREDVIRFLIGVLGALAPLPLTSISTLGIINQNYNFIEASLPAIEATRRP 240

Query: 208 PPDPSAVAVVETTPDGTR-KILGDISAYKLWKCDYVAAAWALINLSAGQFVIGADDNEST 266
             DPSA+AV+E T +  + KI+G+ISA KLWKCDY+AAAWAL NL AGQFV+G +DN S+
Sbjct: 241 LCDPSAIAVLEQTENEQQFKIIGEISASKLWKCDYLAAAWALANLYAGQFVMGVEDNMSS 300

Query: 267 XXXXXXXXXXXXXLVEEIGPGRSPRAKKFSSRSIGFLNSQAHQMAFGRMRSMYRGRSAPL 326
                          +    G +  AKKFSSRSIGF  +   +++ G  RSMYRGRSAPL
Sbjct: 301 RSFSDFLQTSFPGGEQN---GTATNAKKFSSRSIGFNPTSPTRLSIG--RSMYRGRSAPL 355

Query: 327 MCKSTSSLAAVMAQMLSHRATHVWVTDAESEEDGVLVGVVGYTDIFNAVTK 377
            CK++SSLAAVMAQMLSHRATHVWVT+A+S  D VLVGVVGY +I  AVTK
Sbjct: 356 TCKTSSSLAAVMAQMLSHRATHVWVTEADS--DDVLVGVVGYGEILTAVTK 404



>AT5G53750.1 | chr5:21817416-21818723 FORWARD LENGTH=409
          Length = 408

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 165/421 (39%), Gaps = 73/421 (17%)

Query: 1   MAAVFFHHVVGDLTVGKP--------------EVVELHDTDTP-----RAAPDEPPSG-- 39
           MA     H + DL +GKP               +  L  +D P         DE      
Sbjct: 1   MALTLLSHELSDLCIGKPPLRCLSVATATVADAIAALKSSDEPFLTVWSCNHDEKTDDND 60

Query: 40  -ARFLGMISALDIATFVAASGVG----DRAMAAVVGEVVQPNPGLLREVDPGTRLIDALD 94
               LG I   D+  +++           A  A V  ++  +  L+  V     LI+A+D
Sbjct: 61  KCECLGKICMADVICYLSKFDNNVLSLSSAFDASVSVLLPKSRALVVHVQSSCSLIEAID 120

Query: 95  LMKQGVKRFLVRKNGAWRGISKRFSVLYNGKWLKNMEAXXXXXXXXXXXXXXXXXXXYKF 154
           L+ +G +  +V  +   + I+KR       K LK                        +F
Sbjct: 121 LIIKGAQNLIVPIHT--KSITKRRQ---QQKLLKR-----NVVVSLTNATSTTHKNSREF 170

Query: 155 CCLSREDILRFLIGCLGALAPIPLSPISSLGAINPHYC-----HVDASVPAMEAIQKVPP 209
           C +++EDI+RFL+  +   +P+P   IS LG IN  +      +  ++  A+ AI +   
Sbjct: 171 CWITQEDIIRFLLDSISVFSPLPSLSISDLGVINSTHTILAVDYYSSAASAVSAISRAIL 230

Query: 210 DPSAVAVVET---TPDGTRKILGDISAYKLWKCDYVAAAWALINLSAGQ---FVIGADDN 263
           D  +VAVV       D    ++G+IS   L  CD  A A A+  LSAG    ++ G+   
Sbjct: 231 DNVSVAVVGKGCDQEDPCMVLIGEISPMTLACCDETAVA-AVATLSAGDLMSYIDGSGPP 289

Query: 264 ESTXXXXXXXXXXXXXL------------VEEIGPGRSPRAKKFSSRSIGFLNSQAHQMA 311
           ES              +                    SP  K   + S G   S A +MA
Sbjct: 290 ESLVGVVRNRLEDKGMVGLISLIDSLSLSSGSSSDEESPAGKTRMTSSYGRSVSSAARMA 349

Query: 312 FGRMRSMYRGRSAPLMCKSTSSLAAVMAQMLSHRATHVWVTDAESEEDGVLVGVVGYTDI 371
                     +S  ++C   SSL AVM Q ++HR ++VWV D    EDG L+G+V + DI
Sbjct: 350 ---------RKSVAIVCNRKSSLMAVMIQAIAHRVSYVWVID----EDGCLIGMVTFVDI 396

Query: 372 F 372
            
Sbjct: 397 L 397



>AT4G27460.1 | chr4:13732939-13734263 FORWARD LENGTH=392
          Length = 391

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 150/367 (40%), Gaps = 58/367 (15%)

Query: 34  DEPPSGARFLGMISALDIATFVAASGVGDRAMAAV---VGEVVQPNPGLLREVDPGTRLI 90
           D+  +    LG IS  D+   ++     D ++ A+   V  ++     ++  V P   LI
Sbjct: 54  DDNNTECECLGKISMADVICHLSKDH--DHSLCALNSSVSVLLPKTRSIVLHVQPSCSLI 111

Query: 91  DALDLMKQGVKRFLV--------RKNGAWRGISKRFSVLYNGKWLKNMEAXXXXXXXXXX 142
           +A+DL+ +G +  +V        +K      +S   +   NG+                 
Sbjct: 112 EAIDLIIKGAQNLIVPIHTKPYTKKKQHNDNVSVTTTTHSNGQ----------------- 154

Query: 143 XXXXXXXXXYKFCCLSREDILRFLIGCLGALAPIPLSPISSLGAINPHYC------HVDA 196
                     +FC +++EDI++FL+G + A +P+P   +S LG IN  +       H  A
Sbjct: 155 ----------RFCWITQEDIIQFLLGFIAAFSPLPAMSLSDLGVINSTHTVVAVDYHSSA 204

Query: 197 SVPAMEAIQKVPPDPSAVAVVETTPDGTRKILGDISAYKLWKCDYVAAAWALINLSAGQ- 255
           S         +    S   V     D    ++G+IS   L  CD  AAA A+  LSAG  
Sbjct: 205 SAVVSAVSNALAVQTSVAVVDGEGDDPFTSLIGEISPMTLTCCDETAAA-AVATLSAGDL 263

Query: 256 --FVIGADDNESTXXXXXXXXXXXXXLVEEIGPGRSPRAKKFSSRSIGFLNSQAHQMAFG 313
             ++ GA+  ES              L+  +    S  +   SS       +     ++G
Sbjct: 264 MAYIDGANPPES-LVQIVRNRLEDKGLIGLMSLFDSLSSYSTSSGYSSEEEAPVRTTSYG 322

Query: 314 R-MRSMYR--GRSAPLMCKSTSSLAAVMAQMLSHRATHVWVTDAESEEDGVLVGVVGYTD 370
           R M S  R   +S  ++C   SSL AVM Q ++HR  + WV     E+DG  VG+V + D
Sbjct: 323 RSMSSSARMARKSEAIVCNPKSSLMAVMIQAVAHRVNYAWVV----EKDGCFVGMVTFVD 378

Query: 371 IFNAVTK 377
           I     K
Sbjct: 379 ILKVFRK 385



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,651,152
Number of extensions: 287503
Number of successful extensions: 638
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 629
Number of HSP's successfully gapped: 4
Length of query: 384
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 284
Effective length of database: 8,364,969
Effective search space: 2375651196
Effective search space used: 2375651196
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)