Os01g0919700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Epoxide hydrolase family protein.
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Os01g0919700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Epoxide hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.76 | 0.325 | 12.5 | -1.72 | 0.588 | 1.08 | -0.438 | 0.281 | -0.417 | 21.1 | 29.8 | 294 | -- | -- |
| 47.76 | 0.322 | 12.5 | -1.7 | 0.59 | 1.11 | -0.444 | -- | -0.413 | 21 | 29.8 | 297 | -- | -- |
| 48.38 | 0.324 | 12.5 | -1.73 | 0.59 | 1.07 | -- | 0.461 | -0.42 | 21.2 | 29.8 | 297 | -- | -- |
| 48.41 | 0.324 | 12.5 | -1.68 | 0.593 | 1.12 | -- | -- | -0.412 | 21.2 | 29.8 | 297 | -- | -- |
| 66.23 | 0.379 | 12.5 | -1.75 | -- | 0.901 | -- | 0.502 | -0.42 | -- | 29.8 | 213 | -- | -- |
| 77.72 | 0.413 | 12.5 | -1.85 | 0.52 | -- | -0.0314 | -- | -0.384 | 0.1 | -- | -- | -- | -- |
| 77.73 | 0.413 | 12.5 | -1.85 | 0.521 | -- | -- | -- | -0.384 | 0.13 | -- | -- | -- | -- |
| 66.19 | 0.379 | 12.5 | -1.7 | -- | 0.941 | -- | -- | -0.411 | -- | 29.79 | 203 | -- | -- |
| 121.41 | 0.513 | 12.4 | -- | 0.625 | 1.32 | -- | -- | -0.252 | 21 | 29.8 | 303 | -- | -- |
| 94.79 | 0.455 | 12.5 | -1.84 | -- | -- | -- | -- | -0.376 | -- | -- | -- | -- | -- |
| 168.25 | 0.607 | 12.4 | -- | 0.496 | -- | -- | -- | -0.177 | 23.9 | -- | -- | -- | -- |
| 141.6 | 0.554 | 12.4 | -- | -- | 1.13 | -- | -- | -0.233 | -- | 29.79 | 203 | -- | -- |
| 183.77 | 0.633 | 12.4 | -- | -- | -- | -- | -- | -0.172 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.58 | temperature | 30 | 270 | < th | dose independent | rect. | 5 | 22 |
| 6 | 44.40 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 18 |
| 9 | 44.77 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 12 |
| 14 | 45.67 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 14 |
| 23 | 46.23 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 23 |
| 31 | 46.97 | temperature | 30 | 270 | < th | dose independent | sin | 22 | NA |
| 44 | 47.93 | temperature | 30 | 720 | < th | dose independent | rect. | 22 | 14 |
| 45 | 48.02 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 5 |
| 48 | 48.12 | temperature | 30 | 270 | > th | dose independent | sin | 22 | NA |
| 52 | 48.23 | temperature | 30 | 270 | < th | dose independent | rect. | 18 | 23 |
| 53 | 48.25 | temperature | 30 | 270 | < th | dose independent | no | NA | NA |
| 54 | 48.26 | temperature | 30 | 270 | > th | dose independent | rect. | 18 | 23 |
| 59 | 48.45 | temperature | 30 | 270 | > th | dose independent | rect. | 10 | 23 |
| 61 | 48.49 | temperature | 30 | 270 | > th | dose independent | rect. | 10 | 8 |
| 77 | 48.51 | temperature | 30 | 270 | < th | dose independent | rect. | 20 | 23 |
| 78 | 48.51 | temperature | 25 | 270 | > th | dose dependent | rect. | 10 | 10 |
| 80 | 48.58 | temperature | 30 | 270 | > th | dose independent | no | NA | NA |
| 256 | 49.29 | temperature | 25 | 270 | > th | dose dependent | sin | 22 | NA |
| 280 | 49.76 | temperature | 25 | 270 | > th | dose dependent | rect. | 3 | 17 |
| 292 | 49.92 | temperature | 30 | 270 | > th | dose independent | rect. | 15 | 23 |
| 338 | 50.51 | temperature | 25 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 400 | 50.92 | temperature | 25 | 90 | > th | dose dependent | sin | 18 | NA |
| 467 | 51.37 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 11 |
| 531 | 51.83 | temperature | 30 | 720 | < th | dose independent | sin | 6 | NA |
| 572 | 52.02 | temperature | 30 | 720 | < th | dose independent | sin | 8 | NA |
| 589 | 52.08 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 594 | 52.09 | temperature | 25 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 634 | 52.31 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 5 |
| 657 | 52.35 | temperature | 30 | 720 | > th | dose independent | rect. | 9 | 2 |
| 659 | 52.38 | temperature | 30 | 720 | > th | dose independent | sin | 7 | NA |
| 729 | 52.56 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 17 |
| 786 | 52.90 | temperature | 25 | 720 | > th | dose dependent | rect. | 4 | 10 |
| 832 | 53.19 | temperature | 30 | 720 | > th | dose dependent | rect. | 8 | 3 |
| 900 | 53.32 | temperature | 30 | 270 | > th | dose dependent | rect. | 15 | 23 |