Os01g0916300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to PQBP-1 protein (Nuclear protein containing a WW domain) (Npw38) (JM26 protein).
FiT-DB / Search/ Help/ Sample detail
|
Os01g0916300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to PQBP-1 protein (Nuclear protein containing a WW domain) (Npw38) (JM26 protein).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.99 | 0.169 | 10.1 | -0.193 | 0.134 | 0.241 | -0.0105 | -0.118 | 0.00575 | 11.9 | 20.7 | 2624 | -- | -- |
| 13.01 | 0.168 | 10.1 | -0.165 | 0.124 | 0.251 | 0.0135 | -- | -0.00018 | 11.9 | 21.2 | 2660 | -- | -- |
| 12.99 | 0.168 | 10.1 | -0.194 | 0.134 | 0.241 | -- | -0.117 | 0.00576 | 11.9 | 20.7 | 2625 | -- | -- |
| 13 | 0.168 | 10.1 | -0.158 | 0.134 | 0.245 | -- | -- | 0.00926 | 11.9 | 21.2 | 2610 | -- | -- |
| 14.01 | 0.174 | 10.1 | -0.187 | -- | 0.228 | -- | -0.101 | 0.0054 | -- | 21.22 | 2976 | -- | -- |
| 14.55 | 0.179 | 10.1 | -0.0321 | 0.119 | -- | 0.00492 | -- | 0.0822 | 11.6 | -- | -- | -- | -- |
| 14.55 | 0.179 | 10.1 | -0.0319 | 0.119 | -- | -- | -- | 0.0822 | 11.6 | -- | -- | -- | -- |
| 14.04 | 0.174 | 10.1 | -0.163 | -- | 0.234 | -- | -- | 0.0105 | -- | 21.2 | 2986 | -- | -- |
| 13.53 | 0.171 | 10.1 | -- | 0.13 | 0.157 | -- | -- | 0.0447 | 11.5 | 22 | 2590 | -- | -- |
| 15.44 | 0.184 | 10.1 | -0.0353 | -- | -- | -- | -- | 0.0808 | -- | -- | -- | -- | -- |
| 14.58 | 0.179 | 10.1 | -- | 0.119 | -- | -- | -- | 0.0858 | 11.7 | -- | -- | -- | -- |
| 14.21 | 0.176 | 10.1 | -- | -- | 0.159 | -- | -- | 0.058 | -- | 20.66 | 1613 | -- | -- |
| 15.47 | 0.184 | 10.1 | -- | -- | -- | -- | -- | 0.0847 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.75 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 9 | 12.19 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 11 | 12.27 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 9 |
| 17 | 12.40 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 20 | 12.42 | temperature | 20.0 | 90 | > th | dose independent | rect. | 18 | 11 |
| 22 | 12.44 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 58 | 12.66 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 15 | 16 |
| 87 | 12.75 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 99 | 12.76 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 183 | 12.84 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 19 | 12 |
| 195 | 12.85 | wind | 9.0 | 10 | < th | dose independent | rect. | 7 | 23 |
| 207 | 12.86 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 212 | 12.87 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 19 | 4 |
| 250 | 12.89 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 7 | 16 |
| 254 | 12.90 | wind | 9.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 258 | 12.90 | radiation | 10.0 | 720 | < th | dose independent | rect. | 15 | 4 |
| 309 | 12.93 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 311 | 12.93 | humidity | 90.0 | 30 | < th | dose independent | rect. | 5 | 2 |
| 319 | 12.93 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 340 | 12.94 | humidity | 50.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 341 | 12.94 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 343 | 12.94 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 344 | 12.94 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 5 | 2 |
| 359 | 12.95 | temperature | 20.0 | 1440 | > th | dose independent | sin | 11 | NA |
| 361 | 12.95 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 375 | 12.96 | temperature | 20.0 | 1440 | < th | dose independent | sin | 11 | NA |
| 376 | 12.96 | wind | 3.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 380 | 12.96 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 382 | 12.96 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 383 | 12.96 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 386 | 12.96 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 388 | 12.96 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 392 | 12.96 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 393 | 12.96 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 1 |
| 408 | 12.96 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 409 | 12.96 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 410 | 12.96 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 413 | 12.96 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 420 | 12.96 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 11 | 20 |
| 424 | 12.97 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 440 | 12.97 | wind | 7.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 442 | 12.97 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 443 | 12.97 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 444 | 12.97 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 516 | 12.99 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 16 | 9 |
| 531 | 12.99 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 547 | 13.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 551 | 13.00 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 557 | 13.00 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 562 | 13.00 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 563 | 13.00 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 564 | 13.00 | radiation | 1.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 583 | 13.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 586 | 13.00 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 23 |
| 609 | 13.00 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 11 | 22 |
| 622 | 13.01 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 623 | 13.01 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 23 |
| 649 | 13.01 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 670 | 13.02 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 673 | 13.02 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 723 | 13.03 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 23 | 8 |
| 737 | 13.04 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 785 | 13.04 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 848 | 13.06 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 898 | 13.07 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 906 | 13.07 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 960 | 13.08 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 4 |
| 975 | 13.08 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 10 | NA |
| 976 | 13.08 | atmosphere | 1010.0 | 30 | < th | dose dependent | sin | 10 | NA |