Os01g0916200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0916200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Armadillo-like helical domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.18 | 0.2 | 11.1 | 1.36 | 0.138 | -0.977 | 0.0379 | 0.0692 | 0.445 | 20.6 | 20.4 | 12 | -- | -- |
| 18.18 | 0.199 | 11.1 | 1.35 | 0.141 | -0.972 | 0.0266 | -- | 0.442 | 20.6 | 20.45 | 14 | -- | -- |
| 18.18 | 0.199 | 11.1 | 1.36 | 0.14 | -0.974 | -- | 0.0697 | 0.445 | 20.6 | 20.51 | 13 | -- | -- |
| 18.18 | 0.199 | 11.1 | 1.35 | 0.141 | -0.969 | -- | -- | 0.441 | 20.7 | 20.45 | 14 | -- | -- |
| 19.21 | 0.204 | 11.1 | 1.36 | -- | -0.993 | -- | 0.0489 | 0.444 | -- | 20.37 | 6 | -- | -- |
| 32.31 | 0.266 | 11.1 | 1.15 | 0.395 | -- | 0.0872 | -- | 0.275 | 1.11 | -- | -- | -- | -- |
| 32.34 | 0.266 | 11.1 | 1.14 | 0.395 | -- | -- | -- | 0.275 | 1.11 | -- | -- | -- | -- |
| 19.19 | 0.204 | 11.1 | 1.35 | -- | -0.989 | -- | -- | 0.441 | -- | 20.33 | 5 | -- | -- |
| 62.39 | 0.37 | 11.1 | -- | 0.238 | -0.521 | -- | -- | 0.222 | 0.256 | 21.08 | 4 | -- | -- |
| 42.02 | 0.303 | 11.1 | 1.16 | -- | -- | -- | -- | 0.282 | -- | -- | -- | -- | -- |
| 66.79 | 0.382 | 11.2 | -- | 0.414 | -- | -- | -- | 0.147 | 1.23 | -- | -- | -- | -- |
| 65.07 | 0.377 | 11.1 | -- | -- | -0.713 | -- | -- | 0.25 | -- | 21.1 | 3 | -- | -- |
| 77.4 | 0.411 | 11.2 | -- | -- | -- | -- | -- | 0.154 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.25 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 2 | 18.29 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 5 | 18.59 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 14 | 18.94 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 15 | 18.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 23 | 19.24 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 25 | 19.25 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 26 | 19.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 33 | 19.41 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 39 | 19.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 47 | 19.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 50 | 19.68 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 52 | 19.70 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 53 | 19.71 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 54 | 19.71 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 55 | 19.71 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 61 | 19.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 62 | 19.75 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 65 | 19.79 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 66 | 19.80 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 69 | 19.83 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 74 | 19.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 98 | 20.03 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 114 | 20.18 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 119 | 20.20 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 126 | 20.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 171 | 20.45 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 205 | 20.67 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 10 |
| 207 | 20.68 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 10 |
| 231 | 20.74 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 233 | 20.75 | temperature | 25 | 1440 | > th | dose independent | sin | 16 | NA |
| 237 | 20.76 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 246 | 20.79 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 295 | 20.92 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 305 | 20.94 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 372 | 21.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 459 | 21.18 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 564 | 21.30 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 716 | 21.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 737 | 21.45 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 3 |
| 888 | 21.56 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 22 |
| 907 | 21.57 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 965 | 21.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |