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Os01g0915900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0391) R2 : 0.828
β1 : 3.65 (0.156) R2dD : 0.285 R2D : 0.323
β2 : 0.656 (0.0904) R2dC : 0.0196 R2C : -0.0156
β3 : 1.86 (0.107) R2dE : 0.175 R2E : 0.427
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.48 (0.094) R2dN8 : 0.173 R2N8 : 0.187
σ : 0.701
deviance : 226.59
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C
peak time of C : 13.4
E
wheather : temperature
threshold : 20.85
memory length : 6748
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 4.4
open length of G : 1.2

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
214.95 0.689 10.3 3.11 0.634 1.72 0.54 -2.28 1.27 13.4 21.26 5321 4.25 1.36
226.86 0.702 10.2 3.68 0.651 1.87 0.191 -- 1.4 13.5 20.8 6756 4.38 1.22
214.91 0.683 10.4 3.12 0.625 1.72 -- -2.34 1.28 13.4 21.25 5291 4.83 0.985
226.59 0.701 10.2 3.65 0.656 1.86 -- -- 1.48 13.4 20.85 6748 4.4 1.2
237.72 0.718 10.4 3.13 -- 1.8 -- -2.14 1.25 -- 21.26 5287 4.85 1.02
364.97 0.896 10.1 4.99 0.833 -- 0.476 -- 2.34 13.3 -- -- -- --
365.9 0.896 10.1 5.01 0.833 -- -- -- 2.34 13.3 -- -- -- --
251.64 0.739 10.3 3.99 -- 1.81 -- -- 1.27 -- 21.23 5285 4.87 1.03
262.04 0.754 10.4 -- 0.868 4.11 -- -- 0.7 13.1 18 47520 2.68 0.517
408.63 0.945 10.1 4.97 -- -- -- -- 2.33 -- -- -- -- --
1026.55 1.5 10.2 -- 0.747 -- -- -- 1.79 13.1 -- -- -- --
310.16 0.82 10.4 -- -- 4 -- -- 0.695 -- 18.06 47520 2.67 0.316
1061.23 1.52 10.2 -- -- -- -- -- 1.77 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 216.13 radiation 1 14400 < th dose dependent rect. 1 4
2 217.30 radiation 1 14400 < th dose dependent rect. 3 2
6 220.22 humidity 90 43200 > th dose independent rect. 23 1
11 221.77 radiation 1 43200 > th dose dependent rect. 18 1
23 221.98 radiation 10 43200 < th dose dependent rect. 18 13
76 224.97 wind 1 43200 < th dose dependent rect. 18 10
77 225.04 radiation 30 43200 < th dose independent rect. 16 9
80 225.16 radiation 30 43200 < th dose independent rect. 16 1
85 225.29 radiation 30 43200 < th dose independent rect. 16 6
93 225.53 humidity 90 43200 > th dose dependent rect. 23 1
94 225.71 radiation 1 43200 > th dose dependent rect. 17 13
95 225.94 radiation 10 43200 < th dose independent rect. 18 13
99 226.33 radiation 40 43200 < th dose independent rect. 14 11
101 226.35 radiation 40 43200 < th dose independent rect. 14 6
102 226.35 radiation 40 43200 < th dose independent rect. 14 8
103 226.35 radiation 40 43200 < th dose independent rect. 14 15
104 226.36 radiation 40 43200 < th dose independent rect. 14 4
123 226.77 radiation 10 43200 < th dose independent rect. 24 7
126 226.78 radiation 10 43200 < th dose independent rect. 4 3
128 226.78 radiation 10 43200 < th dose independent rect. 21 10
148 227.04 radiation 1 43200 > th dose dependent rect. 16 15
173 227.34 radiation 1 43200 < th dose independent rect. 4 1
225 227.73 radiation 1 43200 > th dose independent rect. 4 1
236 227.73 radiation 1 43200 > th dose dependent rect. 4 1
313 228.21 wind 1 43200 < th dose dependent rect. 20 8
366 229.22 wind 1 43200 < th dose dependent rect. 22 5
388 229.88 radiation 30 43200 > th dose dependent rect. 14 18
436 230.59 humidity 60 43200 < th dose independent rect. 10 1
470 230.84 temperature 20 4320 > th dose independent rect. 4 1
475 230.91 wind 7 43200 > th dose independent rect. 13 2
478 230.98 temperature 20 4320 < th dose independent rect. 4 1
480 231.09 radiation 10 43200 < th dose dependent sin 11 NA
481 231.09 radiation 30 43200 > th dose dependent rect. 14 3
508 231.31 radiation 40 43200 < th dose independent sin 13 NA
529 231.52 radiation 10 43200 < th dose independent sin 12 NA
530 231.54 wind 7 43200 < th dose independent rect. 13 2
540 231.70 wind 1 43200 < th dose independent rect. 19 9
573 232.28 wind 1 43200 < th dose dependent rect. 20 1
662 233.15 wind 7 43200 > th dose dependent rect. 14 1
675 233.52 humidity 60 43200 > th dose independent rect. 10 1
780 234.47 radiation 40 43200 > th dose dependent sin 13 NA
820 234.75 temperature 25 4320 > th dose independent rect. 10 1
828 234.89 wind 1 43200 > th dose independent rect. 19 9
854 235.21 wind 1 43200 < th dose independent rect. 20 7
864 235.40 radiation 1 43200 > th dose dependent sin 13 NA
882 235.73 radiation 10 14400 < th dose dependent rect. 18 2
886 235.74 radiation 10 14400 < th dose dependent rect. 18 4
902 235.80 radiation 10 14400 < th dose dependent rect. 18 7
903 235.81 wind 1 43200 < th dose dependent sin 14 NA
910 235.88 temperature 25 4320 < th dose independent rect. 9 2
917 235.94 radiation 40 43200 < th dose dependent sin 13 NA
939 236.16 humidity 60 43200 < th dose independent rect. 18 18
940 236.17 radiation 30 43200 < th dose dependent rect. 16 2