Os01g0912700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0912700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.5 | 0.337 | 15.2 | -0.767 | 1.36 | -1.21 | 0.561 | -0.915 | -0.287 | 5.99 | 29.62 | 11 | -- | -- |
| 52.33 | 0.34 | 15.3 | -0.905 | 1.36 | -1.42 | 0.482 | -- | -0.288 | 6.04 | 72.33 | 13 | -- | -- |
| 52.17 | 0.339 | 15.2 | -0.774 | 1.36 | -1.18 | -- | -0.79 | -0.287 | 6.01 | 29.62 | 11 | -- | -- |
| 52.78 | 0.341 | 15.3 | -0.899 | 1.36 | -1.43 | -- | -- | -0.288 | 6.03 | 98.51 | 9 | -- | -- |
| 130.53 | 0.535 | 15.3 | -0.666 | -- | -1.02 | -- | -1.07 | -0.188 | -- | 24.1 | 2 | -- | -- |
| 71.73 | 0.397 | 15.2 | -0.633 | 1.19 | -- | 0.363 | -- | -0.0887 | 7.14 | -- | -- | -- | -- |
| 72.08 | 0.398 | 15.2 | -0.626 | 1.19 | -- | -- | -- | -0.0896 | 7.12 | -- | -- | -- | -- |
| 132.51 | 0.538 | 15.3 | -0.808 | -- | -0.928 | -- | -- | -0.218 | -- | 24.1 | 2 | -- | -- |
| 72.11 | 0.398 | 15.2 | -- | 1.29 | -0.995 | -- | -- | -0.137 | 6.36 | 98.51 | 9 | -- | -- |
| 146.39 | 0.565 | 15.2 | -0.603 | -- | -- | -- | -- | -0.0685 | -- | -- | -- | -- | -- |
| 82.41 | 0.425 | 15.2 | -- | 1.18 | -- | -- | -- | -0.0199 | 7.16 | -- | -- | -- | -- |
| 148.47 | 0.569 | 15.2 | -- | -- | -0.658 | -- | -- | -0.0911 | -- | 24.1 | 2 | -- | -- |
| 155.99 | 0.583 | 15.2 | -- | -- | -- | -- | -- | -0.00159 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.60 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 2 | 46.63 | temperature | 20 | 270 | > th | dose dependent | sin | 9 | NA |
| 3 | 46.72 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 7 | 47.15 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 19 |
| 13 | 47.52 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 14 | 47.56 | temperature | 10 | 90 | > th | dose dependent | sin | 7 | NA |
| 16 | 47.61 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 62 | 49.34 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 79 | 49.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 89 | 49.98 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 90 | 49.99 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 98 | 50.17 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 117 | 50.50 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 124 | 50.58 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 131 | 50.78 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 134 | 50.80 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 137 | 50.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 162 | 50.94 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 172 | 50.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 22 |
| 198 | 51.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 207 | 51.17 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 250 | 51.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 267 | 51.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 280 | 51.49 | temperature | 25 | 4320 | < th | dose independent | sin | 14 | NA |
| 283 | 51.49 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 11 |
| 285 | 51.49 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 298 | 51.53 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 299 | 51.53 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 313 | 51.58 | temperature | 25 | 4320 | > th | dose independent | sin | 14 | NA |
| 326 | 51.62 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 327 | 51.63 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 340 | 51.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 345 | 51.67 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 355 | 51.69 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 395 | 51.80 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 402 | 51.82 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 403 | 51.82 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 4 |
| 425 | 51.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 18 | 22 |
| 450 | 51.93 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 590 | 52.21 | temperature | 20 | 4320 | > th | dose dependent | sin | 13 | NA |
| 602 | 52.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 671 | 52.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 863 | 52.64 | temperature | 10 | 4320 | > th | dose dependent | sin | 14 | NA |
| 864 | 52.64 | temperature | 30 | 4320 | < th | dose dependent | sin | 14 | NA |
| 994 | 52.79 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 1 |