Os01g0908700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Hnrpa2b1-prov protein.
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Os01g0908700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Hnrpa2b1-prov protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70 | 0.393 | 12 | -0.323 | 0.608 | 0.242 | -0.0985 | 2.11 | 0.302 | 22.7 | 1000 | 16 | -- | -- |
| 70.09 | 0.39 | 11.9 | -0.202 | 0.607 | 0.613 | -0.126 | -- | 0.299 | 22.7 | 1000 | 11 | -- | -- |
| 70.04 | 0.39 | 12 | -0.317 | 0.609 | 0.247 | -- | 2.08 | 0.302 | 22.7 | 1000 | 15 | -- | -- |
| 70.1 | 0.39 | 11.9 | -0.177 | 0.611 | 0.615 | -- | -- | 0.302 | 22.7 | 1000 | 16 | -- | -- |
| 92.69 | 0.451 | 12 | -0.455 | -- | -0.154 | -- | 4.53 | 0.305 | -- | 999.7 | 19 | -- | -- |
| 80.45 | 0.42 | 11.9 | -0.29 | 0.62 | -- | -0.0671 | -- | 0.343 | 22.8 | -- | -- | -- | -- |
| 80.46 | 0.42 | 11.9 | -0.288 | 0.62 | -- | -- | -- | 0.343 | 22.8 | -- | -- | -- | -- |
| 92.92 | 0.449 | 11.9 | -0.161 | -- | 0.651 | -- | -- | 0.304 | -- | 999.8 | 19 | -- | -- |
| 70.9 | 0.392 | 11.9 | -- | 0.61 | 0.644 | -- | -- | 0.319 | 22.6 | 1000 | 14 | -- | -- |
| 104.25 | 0.477 | 11.9 | -0.275 | -- | -- | -- | -- | 0.347 | -- | -- | -- | -- | -- |
| 82.64 | 0.425 | 11.9 | -- | 0.618 | -- | -- | -- | 0.375 | 22.7 | -- | -- | -- | -- |
| 93.59 | 0.451 | 11.9 | -- | -- | 0.68 | -- | -- | 0.318 | -- | 999.8 | 17 | -- | -- |
| 106.25 | 0.481 | 11.9 | -- | -- | -- | -- | -- | 0.377 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.30 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 15 |
| 5 | 67.27 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 6 | 67.30 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 17 | 15 |
| 8 | 67.44 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 2 | 21 |
| 11 | 67.73 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 18 |
| 12 | 67.75 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 48 | 68.67 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 68 | 69.12 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 75 | 69.20 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 15 |
| 77 | 69.21 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 82 | 69.26 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 8 | 20 |
| 89 | 69.28 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 93 | 69.29 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 18 | 21 |
| 94 | 69.30 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 19 | 20 |
| 100 | 69.34 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 101 | 69.35 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 114 | 69.43 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 117 | 69.44 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 5 | 15 |
| 135 | 69.52 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 150 | 69.60 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 151 | 69.61 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 23 |
| 154 | 69.62 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 20 |
| 181 | 69.73 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 16 | 23 |
| 184 | 69.74 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 6 | 22 |
| 216 | 69.84 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 17 | 15 |
| 218 | 69.86 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 11 |
| 227 | 69.88 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 11 | 23 |
| 263 | 69.96 | radiation | 20.0 | 90 | < th | dose dependent | sin | 23 | NA |
| 272 | 69.98 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 279 | 70.02 | atmosphere | 1000.0 | 10 | > th | dose independent | no | NA | NA |
| 281 | 70.02 | atmosphere | 1000.0 | 10 | < th | dose independent | no | NA | NA |
| 282 | 70.02 | humidity | 80.0 | 30 | > th | dose independent | rect. | 5 | 15 |
| 283 | 70.02 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 287 | 70.04 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 290 | 70.05 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 23 |
| 291 | 70.06 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 292 | 70.06 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 299 | 70.08 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 306 | 70.09 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 309 | 70.11 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 322 | 70.15 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 13 | 23 |
| 343 | 70.22 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 352 | 70.25 | radiation | 10.0 | 90 | < th | dose independent | rect. | 5 | 15 |
| 359 | 70.26 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 373 | 70.31 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 21 | 8 |
| 380 | 70.32 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 381 | 70.33 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 15 | 23 |
| 382 | 70.33 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 1 | 19 |
| 386 | 70.34 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 402 | 70.38 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 405 | 70.38 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 7 |
| 428 | 70.44 | radiation | 10.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 433 | 70.45 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 5 |
| 444 | 70.49 | wind | 7.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 446 | 70.49 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 11 | 21 |
| 451 | 70.50 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 460 | 70.52 | radiation | 20.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 461 | 70.52 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 465 | 70.53 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 477 | 70.55 | temperature | 20.0 | 10 | > th | dose independent | rect. | 17 | 15 |
| 482 | 70.55 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 485 | 70.55 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 15 |
| 489 | 70.56 | radiation | 20.0 | 270 | < th | dose independent | rect. | 13 | 5 |
| 509 | 70.59 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 516 | 70.60 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 525 | 70.62 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 21 | 20 |
| 555 | 70.67 | radiation | 20.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 570 | 70.71 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 575 | 70.72 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 595 | 70.76 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 20 | 19 |
| 603 | 70.78 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 605 | 70.78 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 611 | 70.80 | humidity | 80.0 | 90 | > th | dose independent | rect. | 2 | 18 |
| 673 | 70.89 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 683 | 70.91 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 9 |
| 726 | 70.97 | radiation | 10.0 | 90 | > th | dose independent | rect. | 8 | 9 |
| 739 | 70.99 | radiation | 1.0 | 270 | > th | dose independent | sin | 2 | NA |
| 740 | 70.99 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 755 | 71.01 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 758 | 71.01 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 787 | 71.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 9 |
| 788 | 71.05 | radiation | 10.0 | 270 | < th | dose independent | rect. | 22 | 22 |
| 791 | 71.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 808 | 71.08 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 9 |
| 809 | 71.08 | radiation | 1.0 | 10 | > th | dose independent | rect. | 8 | 9 |
| 823 | 71.10 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 9 |
| 883 | 71.15 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 19 |
| 904 | 71.18 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 19 |
| 908 | 71.19 | wind | 5.0 | 270 | < th | dose independent | rect. | 20 | 17 |
| 961 | 71.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 962 | 71.26 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 15 |
| 973 | 71.27 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 1 | 22 |
| 975 | 71.28 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 3 | 16 |
| 995 | 71.30 | radiation | 10.0 | 270 | > th | dose independent | rect. | 16 | 22 |